EWM28014.1, cds2630 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|585110355|gb|EWM28014.1| (rna-binding protein 26 [Nannochloropsis gaditana]) HSP 1 Score: 365.925 bits (938), Expect = 4.995e-128 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query: 1 MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEYEEAGGGDTDEGVDRGGHRGSHESQEWDILYEEGTDAVGHGYSTGDGMEQDLKASSEPPTRPPGR 181
MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEYEEAGGGDTDEGVDRGGHRGSHESQEWDILYEEGTDAVGHGYSTGDGMEQDLKASSEPPTRPPGR
Sbjct: 1 MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEYEEAGGGDTDEGVDRGGHRGSHESQEWDILYEEGTDAVGHGYSTGDGMEQDLKASSEPPTRPPGR 181
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|1061482209|gb|ODM99511.1| (RNA-binding protein 26 [Orchesella cincta]) HSP 1 Score: 71.633 bits (174), Expect = 2.420e-11 Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 0
Query: 1 MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEYEEA 120
MIV E + AWL Q L+PL + P L+K+VL L+ DK E E+R + +L ++L T PFVD LF+AL Y EP Q + EK N + S + ++S E
Sbjct: 27 MIV---EHTESFQAWLSQVLKPLCDADPGALAKYVLALI-KKDKSEKELRQSMIDQLDVFLQSETKPFVDKLFEALNNKEYLNAKQEPLQAKPES-NEKANNSEVASGVKADKSSPASET 141
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|1079739872|ref|XP_018539271.1| (PREDICTED: RNA-binding protein 26 [Lates calcarifer]) HSP 1 Score: 70.0922 bits (170), Expect = 8.462e-11 Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 0
Query: 1 MIVPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPEQQNAQGIYEKGGNWDRGSDGEGERSDEY 117
MI+ E L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY +PEQ ++ G EK ++ E ER ++
Sbjct: 1 MII---ENLDALKTWLSETLEPICDADPSALAKYVVALV-KKDKSEKELKALCIDQLDVFLQKETQPFVDKLFEAVNNKSYL---PQPEQPSSLGKVEKDEQKKDETNREEEREKKF 110
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|390351467|ref|XP_003727668.1| (PREDICTED: RNA-binding protein 26 [Strongylocentrotus purpuratus] >gi|780161107|ref|XP_011683101.1| PREDICTED: RNA-binding protein 26-like [Strongylocentrotus purpuratus]) HSP 1 Score: 67.781 bits (164), Expect = 6.085e-10 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 0
Query: 3 VPLGEERKKLHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSY 81
+P+ + + L AWL ++L P+ + P L+K+V+ L DK E+RA C+ +LG++L T FVD+LF AL T SY
Sbjct: 1 MPVIDNVEDLMAWLAKKLEPICDADPNALAKYVVALT-KKDKTNEELRATCIDQLGVFLVNETQSFVDNLFVALATKSY 78
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|974059372|ref|XP_015226781.1| (PREDICTED: RNA-binding protein 26 [Cyprinodon variegatus]) HSP 1 Score: 67.3958 bits (163), Expect = 6.553e-10 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L+ +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALV-KKDKSEKELKALCIDQLDVFLQKETQPFVDKLFEAIGNKSYLPLTEQPQ 85
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|961829836|ref|XP_014837393.1| (PREDICTED: RNA-binding protein 26 [Poecilia mexicana]) HSP 1 Score: 67.3958 bits (163), Expect = 6.556e-10 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALVKK-DKSEKELKALCIDQLDVFLQKETQPFVDKLFEAISNKSYLPLPEQPQ 85
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|617425968|ref|XP_007560153.1| (PREDICTED: RNA-binding protein 26 [Poecilia formosa]) HSP 1 Score: 67.3958 bits (163), Expect = 6.943e-10 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALVKK-DKSEKELKALCIDQLDVFLQKETQPFVDKLFEAISNKSYLPLPEQPQ 85
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|961825157|ref|XP_014883409.1| (PREDICTED: RNA-binding protein 26 [Poecilia latipinna]) HSP 1 Score: 67.3958 bits (163), Expect = 7.424e-10 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALVKK-DKSEKELKALCIDQLDVFLQKETQPFVDKLFEAISNKSYLPLPEQPQ 85
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|831555892|ref|XP_012729873.1| (RNA-binding protein 26 [Fundulus heteroclitus]) HSP 1 Score: 67.0106 bits (162), Expect = 8.571e-10 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALVKK-DKSEKELKALCIDQLDVFLLKETQPFVDKLFEAISNKSYLPLPEQPQ 85
BLAST of EWM28014.1 vs. NCBI_GenBank
Match: gi|941780521|ref|XP_014324496.1| (PREDICTED: RNA-binding protein 26 isoform X1 [Xiphophorus maculatus]) HSP 1 Score: 67.0106 bits (162), Expect = 9.608e-10 Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 12 LHAWLQQQLRPLSETSPAILSKFVLQLLDAADKEEAEVRAECLRELGLYLGQSTVPFVDHLFQALRTGSYRELSSEPE 89
L WL + L P+ + P+ L+K+V+ L+ DK E E++A C+ +L ++L + T PFVD LF+A+ SY L +P+
Sbjct: 9 LKTWLSETLEPICDADPSALAKYVVALV-KKDKSEKELKALCIDQLDVFLQKETQPFVDKLFEAIDNKSYLPLPEQPQ 85 The following BLAST results are available for this feature:
BLAST of EWM28014.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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