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Properties
| Property Name | Value |
|---|
| Product | methyltransferase family |
| Orig transcript id | gnl|cribi|Naga_100044g4.1076.mrna |
| Orig protein id | gnl|cribi|Naga_100044g4.1076 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:851082..855426 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2634 ID=rna2634|Name=rna2634|organism=Nannochloropsis gaditana|type=mRNA|length=4206bp
AATCTTACTCTTTACAACTTTCATGAGTTAACCCTTCCTAAGCACATACA
TGTACGTTTGAGCGCGGTACAAGCCGCTAGAGAGGCAGGGATGACCTCCT
TCCTCGCCATGTGATGATTAAAAAGGTCACAGAACAATGTGTCTCTGCAC
GAAGCCACATGTCTGACACACGCACAAAACACTGCACGGCTCTTTATACG
GGTGCGACGACAAGAGGTGGACGAGTCCTGGCTGTCTTGGGGGTTCACAC
TGAAGTGAAGACGGAGGAGACGTCTTGAGCGATTCCCGGCGACTTGCTGG
CCGTAGCGGACGAGGAGGAGGACCCTGCAGAGGTTACGAGGCACACAATC
CACAACGACGGTGGCCACACCCACCTCCGTGTCAGAAGGTCTTAGCAACG
AGGTTTGGTGGGCTTTGACCTGACGGCGTACGTGCTCTCAATCCATGCGC
GAGTTCGAGCAGCCTGCCTGACCCCACCCGTGAGAGAGGAGGTTTTAAAT
CGCCTTTTTTCAGCCAGAAGGGCCTACATGTTTCGTCGGGTCACTCCCTT
CTAGCTCAAGCATCATTGATGAATACACGACGCTGTTCATAGGAAATCAA
AGCTATCATCGAGGCGCCGTAAAAGAATAAGGGTAAGGAAATGATGGTGT
TGTTGAGTTTGTGCGTGGGTTTACAGTGGTTGGTGAGTGAGATCTGGATA
TTGTCGCACCTCCGAAAAGGTGCGAGATTGCGAGAGTGGAAGTACATGCT
GGTCCACCTTGATGGCCGGGTGCACACCTCTATTGCCCTTTTCTATTAAA
GGACCATTTTACAGGGGTCTACGACGTTGAGAGTGGAAAAGTGATTACAT
GTCCCCGGGATGCCTTAAAAGAGCAAGAGCAATAGAATTTTGGTATCATT
TACGATTTGCGCAAAAGGGATGTTTAGATGTCAAATCCCGCATCTGCCAT
GATGATAGAAATGCTCAAAAGTAGTTGAATCTTTTGATAGGTAATCAGGA
AGTCACTGACCACCGGACATGGAGCATTAAACATATGTATCTCTCAGCAC
TTCTCGAACTCGTCGCTTATATTACAAAATAGAGGTAAGGGCTGGTCGTG
CTTTGGAGTCTCTCCGACAAATTTCTTGAAACTTCACAAGACCACTATTA
TAGCATGATGTATCTTAAACAGAGGCTGCTAGGGCCTTAGTAAGCGAAGA
TAACACCACTTGAACATCAGGTCCGCGCCTCTGAGTAACGGTAGGACTGA
GCTTTCTCGCTCCGTGGGCCCGGGCTCAGCCCTTCAGTCCCTAAGGCATC
TGGTGTCTTCACAAACACAGTGAGAGCCCTCTGTTGGCCTTACATGCCCT
GAAATATGAATTTAAATCGACACACCAATGAAACTGGTTTCCGAGCTCGC
TTCTCTGAACTTCAACGAACTTCCATCGGAATTCAAATTTTGAGTTTTTG
ACCCTCTTTGCCCGCCACTGTCCACCCCTGATGACCAAAGTGCTTTCCTT
GAACCGATGAGACGTCGAGCTACTGATGAATTGATTAATTCAAGCAAATA
AGGTGAAAAAGATCTGATCGCCCTCGCGCGCAGCAAATTGCGTGCTTTAG
TCTAAGGTAGAAACGTCCCACCTCGTAAAGCCGGCGACTTGAAAGAGCAA
GAAACGGTTTGTCGGCGAACCATTATCAGAACATAAGACCCTGATAGAGC
CAAGATCTTCGTGAATGGCAGCCAATGAGTCAGTGGTCAGTCACAACTTA
TGCATGAGACTGCGCCCGCGTCGCCAGCAGCGGGTCTGTCCAAACAGAGG
GGTTTTTTAAGGGGGGCTACGATGAAGGGGGAACTACAGGCGCCCTCAGG
GCTCTCGCGGGCTTAGGGACGGAGCCCCTGGCAAAAACGCATTTTGGTGC
CGAAAGCGCATTTTCCGATCACAAGTCGGAGACCCACATAGTTTATCTGG
TCACCTTCACTAGCTTTAGCGTTTTTCATGATAAAAAAAATCATCAATGC
TTGGTGACCCTTTGTGACCCCTGCTATATGGGAAATAGCAGGTAATAGTG
AGCCGTTACAATAAGTTGACCGATCAAACGTCGCGTACATAAATAAAGTT
GCAGAATTTTTCAGCAGATCAACGTTATATCAATACAATACTATATCCTC
CAAAGTGTCGTTACTATTTCTCACATGGGCCCCTGTTTTTTTTTTAATTT
CTCTTCTTATTTATCTACTGCAAAGGGCGCCACTCGGCCTTCTGATGAGA
TCGATTGCGAAGTGAAAGGGGACACTCATATCGGTGGCGAGTGAGGGACC
CTACCTGAAAAGTCATTAAAGAAAGCGAGCACATACTGTAACATGGCGTT
TCTTGCTCGAGCAAGGGGCGGTCAGCATGGCAATGTACGCGACGAAATAC
AGGTTCGACGCAAGGACGCACACCTGCGGAGGAAAATCAATCTGAAATAT
GCTACTCTTATGCTTATGTCGGCCTTGATTTTGACATGTGCTTCTATGAA
ATCAAAGACACTGGAAGGTTTGTTTTTACCAGGTCCAGGTAGAACCCAGA
AAGCAGATGGTAACATTATGATGCACACCGATTCTTCTCTGCAAGGCTCT
GACGCGGAGGTATCAGAATCTTCAAGCAAACAAGGAATGGAGGAAGCGAA
CGACCTGAAAACAGCCTCGCCACTCAATTTAGAGGGCGGTAATAGGCAGG
TGGCTTTTGCCACGGCACGCGGTGATACACCCTCTTTCTCTTCTGACCTT
GTAGAGTCTCCAGCGCCGTTGTCACAGGAGGGCGCACAATACATATCGGG
CGGTGCCTCCCCCGGCGTACGACCCAACACCACCTTATCTGAAGAGTTGA
GTCAGAGCTACTTTGCATCTTTCATCAAGAATCTCAGCTCGTCAGATGAT
CCACTTATAAAAACTGCGGGAGCTATTTTGGCTCGCAAACAGAAGCATGG
CAACTGCAACATCGACGACGCGAAAGACGTCGATCCTTGGAACAGACATG
ATGGATTCCGCCGCGATGTGGCTATCTGCATGCAAATATCAAATGATGCA
GGGATTATGGACGAGTACATAGCTTTCCACTGGGTGCAAGATGTAGGAAA
ATTCGTCATTTACGACGATGGATCAAGTGATAATATCTGGTCGGTGCTGG
AGAAATATGTGGCGCTGGGCATTGTTGAGTACCACAACATTTCAGGCAGT
CCCATCCATGGCACAGTTAACCTGCAAACCCGGGCCATGAACAAATGCTT
CACAATGTTACGAGAGCGTGCAGTGGAGGAAGGTCTGCGATGGATTGCGT
TCCCCGACACTGATGAGTTTGTTCTGTCCTCAATTCCCAATGAGACATTA
TCCGAAACACTCAACAAGAACTACGTAGGTGAGGCATGCTTAAGAATACA
TCGAACTTGGTACGGGTCGTCATTTCAGCACAAGAAACCTTCGAGTCTGG
TGACGGAGACGTACCTCATGGCATCCAATGACTACGGCGGCGGAATTTGG
AACCCCAAGCTCATTGCCAACATATATCCTGAAGGAAAACCCATGAATGC
GACGGCCCTCACTGTCATCCATAATTTTAAAGACGAAGACAAAATTCAAT
GCAAGCCTCAGCAAGAGATAAAAGACATTCGCATCAACCACTACTTGCGG
AGCTTGGAAGAATACAGCGAGAAGAGTGTGTACAAAGACGTGATGCATGA
ATGGCTGAAAGAGCCATTAAAACAGTTCTTTCGAAGAGACTTCAACCTGG
TGTCAAGCCCCATTGCCGCAGACTATTCGTGCCGTGTCCATGCTCTTCTA
AAACAAATCCAAAAGATGAAGCATGCTGGTAAGATTCCTGCTGTAAGAAG
GCCTGAGCCTTGAAATGGTACTAAAAAATAGCTTTTGGAAGATCAGCACG
GAGCGGAGGGGCTGCACTAAGGCTGTTTCGTGAATGACTTTCCATTTGAC
ATCCAAGCTAAGGAAGAGCTTCATGCTTTGTGTACCATATACGAGCATGA
CCTTTTAAAAAGATGCAGGAGGCATGATGCTTCCCAAGTGCGACATTTCA
CGAGAAGCGACATGCGGTGCACAGGAAAAAAAAATGAACGAAGAAAAAAG
AATCGAGTCTCTCTCTTCTCGAATCAATTCCTCGAGTTATGAAGATACGG
ATTACATATGTACGCTATGGATGTGGACGCCGGGAAAAACAATGCAAACC
ATGACC back to topprotein sequence of rna2634 >rna2634-protein ID=rna2634-protein|Name=rna2634|organism=Nannochloropsis gaditana|type=polypeptide|length=506bp
MAFLARARGGQHGNVRDEIQVRRKDAHLRRKINLKYATLMLMSALILTCA
SMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGSDAEVSESSSKQGME
EANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQY
ISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQ
KHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQD
VGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMN
KCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACL
RIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKP
MNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDV
MHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPA
VRRPEP back to topmRNA from alignment at CM002459.1:851082..855426+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2634 ID=rna2634|Name=rna2634|organism=Nannochloropsis gaditana|type=mRNA|length=4345bp|location=Sequence derived from alignment at CM002459.1:851082..855426+ (Nannochloropsis gaditana)
AATCTTACTCTTTACAACTTTCATGAGTTAACCCTTCCTAAGCACATACA
TGTACGTTTGAGCGCGGTACAAGCCGCTagagaggcagggatgacctcct
tcctcgccatgTGATGATTAAAAAGGTCACAGAACAATGTGTCTCTGCAC
GAAGCCACATGTCTGACACACGCACAAAACACTGCACGGCTCTTTATACG
GGTGCGACGACAAGAGGTGGACGAGTCCTGGCTGTCTTGGGGGTTCACAC
TGAAgtgaagacggaggagacgTCTTGAGCGATTCCCGGCGACTTGCTGG
CCGtagcggacgaggaggaggaccctGCAGAGGTTACGAGGCACACAATC
CACAACGACGGTGGCCACACCCACCTCCGTGTCAGAAGGTCTTAGCAACG
AGGTTTGGTGGGCTTTGACCTGACGGCGTACGTGCTCTCAATCCATGCGC
GAGTTCGAGCAGCCTGCCTGACCCCACccgtgagagaggaggtaagtcga
ggaagaggatgagaaggagacgCAATTTCAACAGTCGAAGGAAACAACAT
CCTATGACAGGTTTCCATAAGCATATTTGCGTATCTTTATTTTCTGttgc
cttttttcttcccttctgccGCATTACCAGGTTTTAAATCGCCTTTTTTC
AGCCAGAAGGGCCTACATGTTTCGTCGGGTCACTCCCTTCTAGCTCAAGC
ATCATTGATGAATACACGACGCTGTTCATAGGAAATCAAAGCTATCATCG
AGGCGCCGTAAAAGAATAAGGGTAAGGAAATGATGGTGTTGTTGAGTTTG
TGCGTGGGTTTACAGTGGTTGGTGAGTGAGATCTGGATATTGTCGCACCT
CCGAAAAGGTGCGAGATTGCGAGAGTGGAAGTACATGCTGGTCCACCTTG
ATGGCCGGGTGCACACCTCTATTGCCCTTTTCTATTAAAGGACCATTTTA
CAGGGGTCTACGACGTTGAGAGTGGAAAAGTGATTACATGTCCCCGGGAT
GCCTTAAAAGAGCAAGAGCAATAGAATTTTGGTATCATTTACGATTTGCG
CAAAAGGGATGTTTAGATGTCAAATCCCGCATCTGCCATGATGATAGAAA
TGCTCAAAAGTAGTTGAATCTTTTGATAGGTAATCAGGAAGTCACTGACC
ACCGGACATGGAGCATTAAACATATGTATCTCTCAGCACTTCTCGAACTC
GTCGCTTATATTACAAAATAGAGGTAAGGGCTGGTCGTGCTTTGGAGTCT
CTCCGACAAATTTCTTGAAACTTCACAAGACCACTATTATAGCATGATGT
ATCTTAAACAGAGGCTGCTAGGGCCTTAGTAAGCGAAGATAACACCACTT
GAACATCAGGTCCGCGCCTCTGAGTAACGGTAGGACTGAGCTTTCTCGCT
CCGTGGGCCCGGGCTCAGCCCTTCAGTCCCTAAGGCATCTGGTGTCTTCA
CAAACACAGTGAGAGCCCTCTGTTGGCCTTACATGCCCTGAAATATGAAT
TTAAATCGACACACCAATGAAACTGGTTTCCGAGCTCGCTTCTCTGAACT
TCAACGAACTTCCATCGGAATTCAAATTTTGAGTTTTTGACCCTCTTTGC
CCGCCACTGTCCACCCCTGATGACCAAAGTGCTTTCCTTGAACCGATGAG
ACGTCGAGCTACTGATGAATTGATTAATTCAAGCAAATAAGGTGAAAAAG
ATCTGATCGCCCTCGCGCGCAGCAAATTGCGTGCTTTAGTCTAAGGTAGA
AACGTCCCACCTCGTAAAGCCGGCGACTTGAAAGAGCAAGAAACGGTTTG
TCGGCGAACCATTATCAGAACATAAGACCCTGATAGAGCCAAGATCTTCG
TGAATGGCAGCCAATGAGTCAGTGGTCAGTCACAACTTATGCATGAGACT
GCGCCCGCGTCGCCAGCAGCGGGTCTGTCCAAACAGAGGGGTTTTTTAAG
GGGGGCTACGATGAAGGGGGAACTACAGGCGCCCTCAGGGCTCTCGCGGG
CTTAGGGACGGAGCCCCTGGCAAAAACGCATTTTGGTGCCGAAAGCGCAT
TTTCCGATCACAAGTCGGAGACCCACATAGTTTATCTGGTCACCTTCACT
AGCTTTAGCGTTTTTCATGATAAAAAAAATCATCAATGCTTGGTGACCCT
TTGTGACCCCTGCTATATGGGAAATAGCAGGTAATAGTGAGCCGTTACAA
TAAGTTGACCGATCAAACGTCGCGTACATAAATAAAGTTGCAGAATTTTT
CAGCAGATCAACGTTATATCAATACAATACTATATCCTCCAAAGTGTCGT
TACTATTTCTCACATGGGCccctgttttttttttaatttctcTTCTTATT
TATCTACTGCAAAGGGCGCCACTCGGCCTTCTGATGAGATCGATTGCGAA
GTGAAAGGGGACACTCATATCGGTGGCGAGTGAGGGACCCTACCTGAAAA
GTCATTAAAGAAAGCGAGCACATACTGTAACATGGCGTTTCTTGCTCGAG
CAAGGGGCGGTCAGCATGGCAATGTACGCGACGAAATACAGGTTCGACGC
AAGGACGCACACCTGCGGAGGAAAATCAATCTGAAATATGCTACTCTTAT
GCTTATGTCGGCCTTGATTTTGACATGTGCTTCTATGAAATCAAAGACAC
TGGAAGGTTTGTTTTTACCAGGTCCAGGTAGAACCCAGAAAGCAGATGGT
AACATTATGATGCACACCGATTCTTCTCTGCAAGGCTCTGACGCGGAGGT
ATCAGAATCTTCAAGCAAacaaggaatggaggaagcgaacgACCTGAAAA
CAGCCTCGCCACTCAATTTAGAGGGCGGTAATAGGCAGGTGGCTTTTGCC
ACGGCACGCGGTGATacaccctctttctcttctgaCCTTGTAGAGTCTCC
AGCGCCGTTGTCACAGGAGGGCGCACAATACATATCGGGCGGTGCCTCCC
CCGGCGTACGACCCAACACCACCTTATCTGAAGAGTTGAGTCAGAGCTAC
TTTGCATCTTTCATCAAGAATCTCAGCTCGTCAGATGATCCACTTATAAA
AACTGCGGGAGCTATTTTGGCTCGCAAACAGAAGCATGGCAACTGCAACA
TCGACGACGCGAAAGACGTCGATCCTTGGAACAGACATGATGGATTCCGC
CGCGATGTGGCTATCTGCATGCAAATATCAAATGATGCAGGGATTATGGA
CGAGTACATAGCTTTCCACTGGGTGCAAGATGTAGGAAAATTCGTCATTT
ACGACGATGGATCAAGTGATAATATCTGGTCGGTGCTGGAGAAATATGTG
GCGCTGGGCATTGTTGAGTACCACAACATTTCAGGCAGTCCCATCCATGG
CACAGTTAACCTGCAAACCCGGGCCATGAACAAATGCTTCACAATGTTAC
GAGAGCGtgcagtggaggaaggtcTGCGATGGATTGCGTTCCCCGACACT
GATGAGTTTGTTCTGTCCTCAATTCCCAATGAGACATTATCCGAAACACT
CAACAAGAACTACGTAGGTGAGGCATGCTTAAGAATACATCGAACTTGGT
ACGGGTCGTCATTTCAGCACAAGAAACCTTCGAGTCTGGTGACGGAGACG
TACCTCATGGCATCCAATGACTACGGCGGCGGAATTTGGAACCCCAAGCT
CATTGCCAACATATATCCTGAAGGAAAACCCATGAATGCGACGGCCCTCA
CTGTCATCCATAATTTTAAAGACGAAGACAAAATTCAATGCAAGCCTCAG
CAAGAGATAAAAGACATTCGCATCAACCACTACTTGCGGAGCTTGGAAGA
ATACAGCGAGAAGAGTGTGTACAAAGACGTGATGCATGAATGGCTGAAAG
AGCCATTAAAACAGTTCTTTCGAAGAGACTTCAACCTGGTGTCAAGCCCC
ATTGCCGCAGACTATTCGTGCCGTGTCCATGCTCTTCTAAAACAAATCCA
AAAGATGAAGCATGCTGGTAAGATTCCTGCTGTAAGAAGGCCTGAGCCTT
GAAATGGTACTAAAAAATAGCTTTTGGAAGATCAGCACGGAGCGGAGGGG
CTGCACTAAGGCTGTTTCGTGAATGACTTTCCATTTGACATCCAAGCTAA
GGAAGAGCTTCATGCTTTGTGTACCATATACGAGCATGACCTTTTAAAAA
GATGCAGGAGGCATGATGCTTCCCAAGTGCGACATTTCACGAGAAGCGAC
ATGCGGtgcacaggaaaaaaaaatgaacgaagaaaaaagaatcgagtctc
tctcttctcgaATCAATTCCTCGAGTTATGAAGATACGGATTACATATGT
ACGCTATGGATGTGGACGCCGGGAAAAACAATGCAAACCATGACC back to topCoding sequence (CDS) from alignment at CM002459.1:851082..855426+ >rna2634 ID=rna2634|Name=rna2634|organism=Nannochloropsis gaditana|type=CDS|length=1521bp|location=Sequence derived from alignment at CM002459.1:851082..855426+ (Nannochloropsis gaditana)
ATGGCGTTTCTTGCTCGAGCAAGGGGCGGTCAGCATGGCAATGTACGCGA
CGAAATACAGGTTCGACGCAAGGACGCACACCTGCGGAGGAAAATCAATC
TGAAATATGCTACTCTTATGCTTATGTCGGCCTTGATTTTGACATGTGCT
TCTATGAAATCAAAGACACTGGAAGGTTTGTTTTTACCAGGTCCAGGTAG
AACCCAGAAAGCAGATGGTAACATTATGATGCACACCGATTCTTCTCTGC
AAGGCTCTGACGCGGAGGTATCAGAATCTTCAAGCAAacaaggaatggag
gaagcgaacgACCTGAAAACAGCCTCGCCACTCAATTTAGAGGGCGGTAA
TAGGCAGGTGGCTTTTGCCACGGCACGCGGTGATacaccctctttctctt
ctgaCCTTGTAGAGTCTCCAGCGCCGTTGTCACAGGAGGGCGCACAATAC
ATATCGGGCGGTGCCTCCCCCGGCGTACGACCCAACACCACCTTATCTGA
AGAGTTGAGTCAGAGCTACTTTGCATCTTTCATCAAGAATCTCAGCTCGT
CAGATGATCCACTTATAAAAACTGCGGGAGCTATTTTGGCTCGCAAACAG
AAGCATGGCAACTGCAACATCGACGACGCGAAAGACGTCGATCCTTGGAA
CAGACATGATGGATTCCGCCGCGATGTGGCTATCTGCATGCAAATATCAA
ATGATGCAGGGATTATGGACGAGTACATAGCTTTCCACTGGGTGCAAGAT
GTAGGAAAATTCGTCATTTACGACGATGGATCAAGTGATAATATCTGGTC
GGTGCTGGAGAAATATGTGGCGCTGGGCATTGTTGAGTACCACAACATTT
CAGGCAGTCCCATCCATGGCACAGTTAACCTGCAAACCCGGGCCATGAAC
AAATGCTTCACAATGTTACGAGAGCGtgcagtggaggaaggtcTGCGATG
GATTGCGTTCCCCGACACTGATGAGTTTGTTCTGTCCTCAATTCCCAATG
AGACATTATCCGAAACACTCAACAAGAACTACGTAGGTGAGGCATGCTTA
AGAATACATCGAACTTGGTACGGGTCGTCATTTCAGCACAAGAAACCTTC
GAGTCTGGTGACGGAGACGTACCTCATGGCATCCAATGACTACGGCGGCG
GAATTTGGAACCCCAAGCTCATTGCCAACATATATCCTGAAGGAAAACCC
ATGAATGCGACGGCCCTCACTGTCATCCATAATTTTAAAGACGAAGACAA
AATTCAATGCAAGCCTCAGCAAGAGATAAAAGACATTCGCATCAACCACT
ACTTGCGGAGCTTGGAAGAATACAGCGAGAAGAGTGTGTACAAAGACGTG
ATGCATGAATGGCTGAAAGAGCCATTAAAACAGTTCTTTCGAAGAGACTT
CAACCTGGTGTCAAGCCCCATTGCCGCAGACTATTCGTGCCGTGTCCATG
CTCTTCTAAAACAAATCCAAAAGATGAAGCATGCTGGTAAGATTCCTGCT
GTAAGAAGGCCTGAGCCTTGA back to top
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