EWM28062.1, cds2626 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|585110404|gb|EWM28062.1| (methyltransferase family [Nannochloropsis gaditana] >gi|585110405|gb|EWM28063.1| methyltransferase family [Nannochloropsis gaditana]) HSP 1 Score: 1062.75 bits (2747), Expect = 0.000e+0 Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0
Query: 1 MAFLARARGGQHGNVRDEIQVRRKDAHLRRKINLKYATLMLMSALILTCASMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGSDAEVSESSSKQGMEEANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQYISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQKHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPAVRRPEP 506
MAFLARARGGQHGNVRDEIQVRRKDAHLRRKINLKYATLMLMSALILTCASMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGSDAEVSESSSKQGMEEANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQYISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQKHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPAVRRPEP
Sbjct: 1 MAFLARARGGQHGNVRDEIQVRRKDAHLRRKINLKYATLMLMSALILTCASMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGSDAEVSESSSKQGMEEANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQYISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQKHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPAVRRPEP 506
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|585108646|gb|EWM26561.1| (methyltransferase family [Nannochloropsis gaditana]) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 274/483 (56.73%), Postives = 338/483 (69.98%), Query Frame = 0
Query: 24 KDAHLRRKINLKYATLMLMSALILTCASMKSKTLEGLFLPGPGRTQKADGNIMMHTDSSLQGSDAEVSESSSKQGMEEANDLKTASPLNLEGGNRQVAFATARGDTPSFSSDLVESPAPLSQEGAQYISGGASPGVRPNTTLSEELSQSYFASFIKNLSSSDDPLIKTAGAILARKQKHGNCNIDDAKDVDPWNRHDGFRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKSVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQIQKMKHAGKIPAVRRPEP 506
+ A +RR I + T +SAL++ A + L G + Q+A M + SD+ +S + +EEAN S E N+Q+ AT R D S S+ V S A L ++ AQ S AS G+ NT+ SEEL ++Y ASFI+ L+SSDD ++KTAGA+LA KQKHG+C ID K+ DPWN+ DG RRD+A+CM + N+A I+DEYIAFHW+Q V KFVIYDD S DN WSVLEKYVALGIVEYHN++G P + LQ ++N C LR+RA EEGLRWIAF D DEF LSS+PNE+LSETLNKNY GEACL IHRTWYGSSFQHKKPS LV ETYLMAS+DYGGGIWN KLIANI PEGK +NAT L+ +H+F+ ED + CK Q I+D+R+NHYLRSLEEYS K+ + + + P ++FFRRDFNLVSSPIAADY+CRVHALL+QI+ MK GKIPA RP P
Sbjct: 14 RSAFMRRGIGINKITGRFLSALVIMYAFLYFDILGGFAVSDRVNIQEASK--AMQALPMSKASDSVAPDSRNFLDLEEANQELPPSLPQTEQSNQQIVSATTRDDASSVSAGPVTSQALLHEKDAQ-TSLNASSGMPVNTSGSEELRRNYRASFIEELNSSDDLVMKTAGAVLAHKQKHGDCKIDVHKEADPWNKLDGVRRDIAVCMVLKNEARILDEYIAFHWLQGVSKFVIYDDASQDNPWSVLEKYVALGIVEYHNMTGHPNPSSSKLQITSLNTCSKSLRQRAEEEGLRWIAFIDADEFALSSVPNESLSETLNKNYRGEACLAIHRTWYGSSFQHKKPSGLVIETYLMASSDYGGGIWNGKLIANINPEGKAINATTLSTVHSFRKEDNVSCKSQTTIRDVRVNHYLRSLEEYSTKAYHNHNKPQLEETPFERFFRRDFNLVSSPIAADYACRVHALLQQIEDMKTTGKIPAAERPGP 493
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|298711345|emb|CBJ32491.1| (glycosyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 104.76 bits (260), Expect = 2.031e-21 Identity = 78/276 (28.26%), Postives = 129/276 (46.74%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTV---NLQTRAMNKCFTM---LRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASN---DYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQ--EIKDIRINHYLRSLEEYSEKSV-YKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQI 489
VAIC++ + A + E+IAFH+ V + IYDD S+DN VL +V GIV Y I + Q + +N C R R E+ W+ F DTDE++ S + + + L K++ C + R YGS+ + P L+ E +LM S+ +G G+ K++ N+ P +P + + + + C + + D+RINHYL S+ +Y +++ Y + + K RRD N S ++C +L +I
Sbjct: 3 VAICLRTKDFARFLPEWIAFHYALGVDEIFIYDDDSTDNTEEVLWPFVEAGIVRY-------IFEVIFDRMTQMKPLNHCLEQQLERRSRGDEDAATWVLFHDTDEYLYPSDTSLNIRDALEKHH-RTCCALVSRVQYGSAGHDEMPRGLLLENFLMHSHPGPQFGNGL--AKVMVNLDP-SEPEVGVVEPPLRSMHNAEGCDCAGSKFGGVSDLRINHYLGSIGDYMDRTTRYWEAKKKGEMAAAKTVLRRDINNYRSDDIEHWACATREVLFRI 267
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|298706993|emb|CBJ29801.1| (glycosyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 102.834 bits (255), Expect = 5.920e-20 Identity = 76/274 (27.74%), Postives = 121/274 (44.16%), Query Frame = 0
Query: 223 RRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTV---NLQTRAMNKCFTMLRERA---VEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASNDYGGGIWNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEK-SVYKDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQI 489
R++VA+C++ + + E++AFH+ V + IYDD S D VL+ +V+ GIV Y I + N Q +N+C R E W+ F D DE+V + TL + LNK + C + R YGS + P LV ++++ ND NPK++ N+ P A L +H + C +++ INHYL S +Y E+ Y +P + +RD N S +SC +L ++
Sbjct: 173 RKEVAVCLRTKDYGRFLPEWVAFHYAIGVDEVSIYDDNSVDQTSEVLKPFVSAGIVRY-------IFDMIPRRNAQMEPLNRCLRHYINRKKDDPENAPSWLLFHDNDEYVYPRDTSMTLFDALNK-HESTCCALVRRIQYGSGGHDEMPRGLVMDSFMAHQNDSSHHA-NPKVVVNLTPTESDPVAPPLKSMHKAEG-----CACLDLKQEVLINHYLGSRGDYLERVHRYWSTYMAGDNDPGHRLSQRDVNDRVSDTITHWSCSTREVLYRV 432
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|503755270|ref|WP_013989346.1| (hypothetical protein [Weissella koreensis] >gi|338854197|gb|AEJ23363.1| hypothetical protein WKK_02445 [Weissella koreensis KACC 15510]) HSP 1 Score: 89.3521 bits (220), Expect = 6.162e-16 Identity = 84/282 (29.79%), Postives = 130/282 (46.10%), Query Frame = 0
Query: 222 FRRDVAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMASN-----DYGGGIWNPKLIANIYPEGKPMNATAL--TV------IHNFKDEDKIQCKPQQEIKDIRINHYL-RSLEEYSEKSV--YKDV-MHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALL 486
F + + + N++ + E+I FH + V F IYD+ S DNI VL+ Y+ G+V+Y I G Q N+ R +RW+A D DEF++ + E + + +N + + + + YGS+ KKP LVT+ + + DY I NP+L+ + G P AT + T+ I N+ KI +P + K IRINHY +SLEE+ +KS Y D + L + F D N V+ + YS +H L
Sbjct: 52 FEHQLGVVAIVKNESPYLKEWIEFHKLVGVDIFYIYDNESDDNIMEVLQPYIDQGLVKYKFIKGK------KQQLAVYNEAIEQYR-----NDVRWLAIIDADEFIV-PVEKENILDMMNSLDISFSQILVGWLIYGSNGLKKKPKGLVTDNFKYHARSEFIADY-KPILNPRLVLKV---GSPHWATIIGKTIDENGKRIWNYPYHTKIYAEPASKNK-IRINHYYSKSLEEFIKKSKRGYADNGSSDRLARDMDAFHEHDQNYVTDTVINKYSDMLHKRL 316
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|298706911|emb|CBJ29738.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 88.5817 bits (218), Expect = 3.497e-15 Identity = 75/301 (24.92%), Postives = 134/301 (44.52%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFT--MLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMAS--NDY--------------------GGGI------WNPKLIANIYPEGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHYLRSLEEYSEKS------VY-KDVMHEWLKEPLKQFFRRDFNLVSSPIAADYSCRVHALLKQI 489
VA C++ + + E+IA+H+ V + IYDD S+D+ +L+ +V GIV Y G Q +N+C M+R + + RW+ F DTDE+++ + T+++ L+K + C+R+ R YG+ + P L+ E +L + +D+ GGG+ +++ N+ +P+ A + + + + C + +IRINHYL S +Y K+ VY +D + +WL E RD N S ++C +L +
Sbjct: 182 VAACVRTKDFGRFLPEWIAYHYAIGVDEITIYDDDSNDDTVEILQPFVDAGIVTYV----LERTGHWQNQMTPLNRCLEEHMVRRLSDNDAPRWLLFHDTDEYIVPVDTSVTIAQALDK-HSSTCCVRVPRVTYGAGGHDEMPQGLLLEAFLQHAHLHDFKSNRLPKRALAGDKTVPTSSGGGLSLFLENQMLQVMVNL-DTTQPLLGQATSRLKSMHNGQGCLCD-VIPVDEIRINHYLGSRGDYLGKTKRYWQEVYSRDKVEKWLME-------RDMNSFKSDTITTWACATREVLSIV 468
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|495174475|ref|WP_007899270.1| (glycosyltransferase family 92 protein [Prevotella stercorea] >gi|357559091|gb|EHJ40555.1| hypothetical protein HMPREF0673_01304 [Prevotella stercorea DSM 18206]) HSP 1 Score: 86.2705 bits (212), Expect = 4.316e-15 Identity = 71/235 (30.21%), Postives = 111/235 (47.23%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMAS------NDYGGGIWNPKLIANIYP-------EGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHY-LRSLEEYSEKSV 446
+AIC N+ E+I +H V +F IYD+ S+D+ +LE Y+ GIV+Y G +Q A + C R A RWIAF D DEF++ + + T+ + L K + + I+ YGS KK + V + + S N + I NP+ + + GK ++ + +NF++ PQQ++ IRINHY +RSLEE+ EK +
Sbjct: 51 LAICAIAKNEGPYFKEWIEWHLAHGVDQFFIYDNESTDDTKDILEPYIKQGIVDYKPWPG------YRMQLAAYDDCLERHRFDA-----RWIAFIDLDEFIV-PVQDATIPDFL-KRFEAFPAVEINWLVYGSGGNKKKSNEDVMKRFRFHSLPDHYLNRHVKSIVNPRRVFTMIGCHEVARINGKAADSHGNIIKNNFRER-----TPQQDV--IRINHYAVRSLEEFREKQL 265
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|524731442|emb|CDE34163.1| (putative uncharacterized protein [Prevotella stercorea CAG:629]) HSP 1 Score: 84.7297 bits (208), Expect = 1.262e-14 Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMAS------NDYGGGIWNPKLIANIYP-------EGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHY-LRSLEEYSEKSV 446
+AIC N+ E+I +H V +F IYD+ S+D+ +LE Y+ GIV+Y G +Q A + C R A RWIAF D DEF++ + + T+ + L K + + I+ YGS +K V + + S N + I NP+ + + GK ++ + +NF++ PQQ++ IRINHY +RSLEE+ EK +
Sbjct: 51 LAICAIAKNEGPYFKEWIEWHLAHGVDQFFIYDNESTDDTKDILEPYIKQGIVDYKPWPG------YRMQLAAYDDCLEQHRFDA-----RWIAFIDLDEFIV-PVQDATIPDFL-KRFEAFPAVEINWLVYGSGGNKEKSDEDVMKRFRFHSLPDHYLNRHVKSIVNPRRVFTMIGCHEVARINGKAADSHGNIIKNNFRER-----TPQQDV--IRINHYAVRSLEEFREKQL 265
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|524350376|emb|CDB04724.1| (putative uncharacterized protein [Prevotella sp. CAG:520]) HSP 1 Score: 82.8037 bits (203), Expect = 5.946e-14 Identity = 67/235 (28.51%), Postives = 110/235 (46.81%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMAS------NDYGGGIWNPKLIANIYP-------EGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHY-LRSLEEYSEKSV 446
+A+C N+ E+I +H V +F IYD+ S+D +LE Y+ G+V+Y G +Q A + C R + RWIAF D DEF++ + + T+ + L K + + I+ YGS +K + V + + S N + I NP+ + + +GK ++ + NF++ PQQ++ IRINHY +RSLEE+ EK +
Sbjct: 51 LAVCAIAKNEGPYFKEWIEWHLAHGVDQFFIYDNESNDGTREILEPYIERGVVDYKYWPG------YRMQLAAYDHCLEHHRFDS-----RWIAFIDLDEFIV-PVKDATIPDFL-KRFEAFPAVEINWLVYGSGGNKEKSNEDVMKRFRFHSLPDHYLNRHVKSIVNPRRVFTMIGCHEVARIDGKAADSHGNPITRNFRER-----TPQQDV--IRINHYAVRSLEEFREKQL 265
BLAST of EWM28062.1 vs. NCBI_GenBank
Match: gi|1141170898|ref|WP_076931994.1| (hypothetical protein [Proteiniphilum saccharofermentans]) HSP 1 Score: 82.4185 bits (202), Expect = 8.735e-14 Identity = 71/233 (30.47%), Postives = 111/233 (47.64%), Query Frame = 0
Query: 226 VAICMQISNDAGIMDEYIAFHWVQDVGKFVIYDDGSSDNIWSVLEKYVALGIVEYHNISGSPIHGTVNLQTRAMNKCFTMLRERAVEEGLRWIAFPDTDEFVLSSIPNETLSETLNKNYVGEACLRIHRTWYGSSFQHKKPSSLVTETYLMAS------NDYGGGIWNPKLIANIYP-------EGKPMNATALTVIHNFKDEDKIQCKPQQEIKDIRINHY-LRSLEEYSEK 444
+A+C N+ E+I +H + KF IYD+ S+DN VLE Y+ G+VEY G V Q + C R A RWIAF D DEF++ + ++T+ + L + + G + + ++ YGS KK + V E + S N I NP+ + + GK +++ +V NF+D + PQ ++ IRINHY ++S EE+ EK
Sbjct: 52 LAVCAIAKNEGPYFQEWIEWHHNLGIEKFYIYDNESTDNTKEVLEPYIVSGLVEYVFRKG------VKQQLPVYDDCLEKHRLDA-----RWIAFIDLDEFIV-PMQDKTIPQFLCR-FEGASAVEVNWLVYGSGGARKKVAGGVMERFKRHSEPSHILNRNVKSIVNPRRVFSFIGCHEVARMSGKTVDSHGQSVRKNFRDRN-----PQHDV--IRINHYAVKSYEEFLEK 264 The following BLAST results are available for this feature:
BLAST of EWM28062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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