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Properties
| Property Name | Value |
|---|
| Product | fungal specific transcription |
| Orig transcript id | gnl|cribi|Naga_100044g21.1065.mrna |
| Orig protein id | gnl|cribi|Naga_100044g21.1065 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:810564..815111 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2619 ID=rna2619|Name=rna2619|organism=Nannochloropsis gaditana|type=mRNA|length=1534bp
CCCAACTGCAGTCATACACATAAATGCCCTCCAGCGTTTCACCGTAGTCC
AGGCGGAAAAAAAATCGGTATCGAATATATTGGTTGTGTGTGCGCCTTGA
CAGAATGGCTGAAGACGATATATCAGGGACCAGAGTTAACGCCGTGGCCT
GATGTTCAGCCAAAAAAATGACACGACCCTCGGAGAAATTAAGTATCTTA
CGTCTTATACGGCACAGGCAGGTATTTCCCAGGATGCAAAGAATAATACC
TCGGTTAAAAGCAAGTACGGCACCAACAAGGAGACGAATGAGATTAACGT
CTTGGGTATTGACCCTGGGTTTCCTACTCGGACATGCATCCGCGTTCGTT
CGCCTGCGTCCCGCCTCTCCAGTGCTTGCGGGGCTCCGAGAACATCCCTT
CGACAATAAATTTGCCGTCAAATCTACTGTTTTATTGAAAAAGACCTATT
ACCGACGTTTATCAGCGACTGGTCCGGTGGCACCTTCTTTTTCAACGGAG
AATGGTCTAATTCCCCGCGTAAAAACTTTAGCCAAAAACATGGTCACCGG
TTTGCCTCTTGTAGCTTTCTCCACCATTTCTGGAGGAATGCTGGCGGGAT
CTTTGCATGCTGTGACAGGTCCCGACCACCTTGCGGCACTGCTACCTCGG
TGTATTGGCAAGCGATGGTACCAAGCAATGCGGATCGGCGCCGTCTGGGG
CCTGGGACACGGCATCAGTGCAATCATCATGGGAATGGTCGCGTTTTTCC
TCAAAGGCCGGCTGTCAACCTACTCACACAGCACCCTCATACCCAAACTC
TCCCTGTACACTGAAGTGCTCATTGGGGTGAGTCTCATCATCATTGGCCT
CCTGGGGCTAAAGGAGGCGGCGCATTTCGACGTTTCCGCAGTCATGCCTC
TGGAAGCCGAGGGCTCGATTACCGGATCGGGTGCATCTGGTGCCGCTAAA
AAGAAGGCCACGGGTAAAGCGGTCTTTCTCAATGGATTGCTGCATGGCTT
CTCTTGGGACGGAACACCGACATTAGCCCCTGCTCTGGCGTTCGACTCCT
GGCTCCCGGTGATGACATTCCTGTGCTCCTACGGCCTCGGCACCATGCTT
TCCATGAGCACCGCCACCAGCCTGATCGGGGAGGGCACGGTCAAGGTCGG
GCAGGCTTTGGACAAGCCAAATATCCCCAAGAAACTTGCCCAAGGGTCCT
CTGTGGTGGCCATCTTGGTGGGACTGGTGTGGACCGTGAAGGCGCTTGTT
TGAGCATATGAATGTCGAGTAGGAAAGGTGCAAAGAGCGGGAATAAAGCA
TGCCTCAAAGACGCAATCGATGGTACATATAGATAGTCAGACGGATGACT
GCTGAATCACTGAAAATGAAAAGAATTTAAAAGTCGCAAACAGGCGGTAT
ATAGGCTCGTTGCGTTCATGATTGAAAGGAGCGTCCCATCATTCTTTTTT
AAAGCAACGCATGCAAAACGGTGTCGAAATGATAGACACGGGAGCAAAGA
ATGTCTGGCTAGAGGTCCACGGAGGGGCCTTGGA back to topprotein sequence of rna2619 >rna2619-protein ID=rna2619-protein|Name=rna2619|organism=Nannochloropsis gaditana|type=polypeptide|length=935bp
MQQRRHVRGLHMLKNMDVSMREDAEGQRQGHPRRGVCHSTHPRREETTWD
DSEREQEIFALYDEADGERCPSAPASPSHSGIDSDGALLRYTCKGCRKSK
VRCDRVFPCQRCVRLGKKCIPHLRRNGRLNQFAPTSPCSGNDIKRSVVSK
RDKDPAEYSTQQHTRQVQERGLRPKIGEDQCQPQEQDHFHQQRMHPPTHA
TGHVCSRHLPQSEACAPVSAFPSGNSFDISHPRSPPKQFKNTYHAHDLGP
ERPAGIRHTGESMDQMKEDAWVAASGRPEGRQRGHGERTRQAAVRSIARD
TTACNQHSVLELGHYGPCGQVDAGSKSKTKTPPPESVTSAKRDVRRSYGE
KGGNRPRPIAPDGYVPLSVSFESSSQHVQRHPGNRERQGPSNRERQDPFS
RERQDPFSSVPSDALPEQGSAKHARHRETPEHAMVKPVCYSLPVSEHGSG
RPGMRDVACGSATAMEEDMGLSSLEGDGQIGRLPKNPDPALSYHFRWRRF
PGQEAMASCSFVPITGNVLSADDRPSLTLLSPDSYDAEVAPSTTYPSIDS
LSSCTTEATNSSSHGGSKAHASIVMMPDGGPPSWALMAVLQPPPGLRYYD
HCKTTAPLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCGAS
AAIVRVLALRKSAAYTSGSGESSESVGTNAEQPVEWNDDLLAMDRQDALD
QAHMPSYVSSLQDGGDSAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSL
FDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVME
LDGHVFKALVRARYMVLNEGQYSCFALSFLQIPGLPVRFVPPTIHPSSIA
SAAADQSRSDACPDVSMASSHTRGAAPHAKKKTSPAKHRTVDMGVNLVDG
RREVNQAEEYGRGEESRRIPAAGGRRQVLEQRAGR back to topmRNA from alignment at CM002459.1:810564..815111- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2619 ID=rna2619|Name=rna2619|organism=Nannochloropsis gaditana|type=mRNA|length=4548bp|location=Sequence derived from alignment at CM002459.1:810564..815111- (Nannochloropsis gaditana)
AAAGCAAGTTTTTCTATCTTTTTTAACGTGTTCAAGGTATGAAGCAATTA
TTCGATGTATCAAATGGATCTATCTGAATGTAACAACGCAGAGAGGATAT
TTTGGCAGCTTCCATCAACCGTGAGTGCGCCTTTTAGAGGTGAGAAGGTA
TCGTGGACAGTATGGGCGTATGGGCCCGCGCAGAACACGGAGAGTGAGTT
GACACGTGAACCTCCGAATCCAACGATACAAACGAATAATCCCCCCGTTC
TGCTTAAATTCTCGAAATGGGCTCCTCTTCGCGCAAATTTATTGATTCTT
CCACTGCTGGAGCCTTACTAGCGTATACCTGAGGAAGGTCTATCGTTGAG
GACGCCCATGTTCTTCTTGTATCGAAAGGCATTATCTGCCGTGAAAACAC
CGGCACTTTTCATTTGAAGTGGAGATAGCCAACACCAGGTGCCAACATTC
GTTTCTATCCCACATTACTTCACTTTGTACTTTGCTAGATGTGTGTCAAG
GGCGAGATGGATTTTTAGTCTCATTCTGGGCACGTGGACATTGTATGTCC
TTACAAGCCGTTTCTCTCGCGAGCCGTATGTATCTTGCTTCCCGATGTCT
GGAGATCCATGGCGTCCCCATATACAGCTCCTTGTCGCATCTATGTTCCT
TATGCGAAAGTTGGTCTAGTTAAGTCGCGTTTGCCTGGCTTCCGCTATTT
TTTCACTGTAATTTTCCGTACTCCTTGACGGTGCTCTCATCGCTCCTTTC
GTATACTGCAGATGGTCCCAATGCTCCCGGGCTTTCTCGTACTCGGCCCT
AACAACCTTTAGGGAAGTTCAAGCCATGGCACAGTCACCGTGTATGTCTG
TGGCCGTGAGTAATAGTGCGGACGCGGCTGAGAGTTGCTGTCCCGACTTC
GATTTCCACCCGAATGATCACGATTTTGAGTAGGAAGGACGGCAGCAACA
ACCGTCTTTCGACAGGAATATGCAACAGCGCAGGCATGTACGGGGACTTC
ATATGCTGAAGAATATGGACGTCTCCATGCGTGAGGACGCGGAAGGGCAG
CGTCAGGGCCATCCGCGTCGAGGCGTCTGTCACTCAACTCATCCCAGACG
CGAAGAAACCACGTGGGACGACTCTGAGAGGGAACAGGAAATATTTGCTC
TGTACGACGAGGCAGATGGAGAACGATGTCCATCTGCACCTGCCTCTCCA
AGTCATTCCGGAATTGACAGCGACGGGGCTCTGTTGCGGTACACGTGTAA
GGGTTGTCGAAAGTCGAAGGTGCGCTGCGACCGTGTTTTCCCTTGTCAGA
GATGTGTGCGATTGGGGAAAAAGTGTATTCCCCACTTGCGTCGGAACGGG
CGATTGAATCAATTCGCCCCTACATCTCCATGCTCTGGCAATGACATCAA
GCGATCGGTGGTGTCGAAAAGGGACAAAGACCCGGCAGAGTACAGCACGC
AACAGCACACGCGACAAGTGCAAGAGCGAGGGCTCAGGCCAAAAATTGGC
GAAGACCAATGTCAACCACAAGAGCAGGATCACTTTCATCAACAGCGAAT
GCATCCACCAACGCATGCCACGGGGCACGTGTGCAGCCGGCACCTGCCCC
AGTCAGAGGCATGCGCGCCGGTCTCTGCTTTTCCATCTGGCAACTCGTTC
GACATATCTCACCCACGTTCTCCGCCAAAACAATTCAAAAACACATATCA
CGCCCATGACCTCGGCCCGGAGAGGCCTGCGGGTATCCGTCATACTGGCG
AGTCTATGGACCAGATGAAAGAAGACGCATGGGTGGCTGCCTCCGGGAGA
CCGGAGGGCAGACAGAGAGGCCACGGCGAACGCACTCGTCAAGCGGCTGT
CCGCTCCATCGCACGCGACACCACAGCTTGCAATCAACACTCAGTATTGG
AACTTGGTCACTATGGACCATGCGGCCAGGTGGATGCTGGGAGCAAGTCT
AAAACTAAAACACCCCCCCCGGAAAGCGTAACCAGTGCGAAGCGAGACGT
GCGCAGGAGCTATGGCGAGAAGGGAGGCAATCGACCGCGACCCATTGCCC
CGGATGGTTATGTCCCTCTCTCGGTGTCCTTCGAAAGTTCATCACAACAC
GTACAGCGTCATCCCGGCAACCGTGAGCGGCAAGGCCCCTCCAACCGTGA
GCGGCAAGACCCCTTCAGCCGTGAGCGGCAAGACCCCTTCAGCAGCGTTC
CCTCCGATGCTTTGCCCGAGCAAGGCTCGGCCAAGCATGCGAGACATCGA
GAGACGCCTGAACACGCCATGGTTAAGCCTGTTTGCTACTCGCTGCCTGT
TTCGGAGCATGGAAGTGGTCGTCCGGGTATGCGTGATGTCGCCTGTGGAT
CGGCCACGGCAATGGAAGAGGACATGGGACTGTCCTCGCTCGAAGGCGAT
GGTCAAATCGGAAGGCTTCCTAAGAACCCCGACCCGGCATTATCTTACCA
CTTCCGATGGAGACGATTTCCGGGGCAAGAGGCGATGGCGTCCTGCTCGT
TTGTGCCCATAACCGGGAACGTGCTCAGCGCCGACGATCGCCCCTCCTTG
ACTCTGCTTTCACCGGATTCGTATGACGCGGAAGTCGCCCCCTCCACGAC
CTACCCGTCAATTGACTCCCTATCTTCGTGCACTACAGAGGCCACAAATT
CAAGCAGCCACGGCGGCAGTAAGGCGCACGCCTCCATCGTCATGATGCCG
GACGGAGGGCCCCCCTCCTGGGCTCTGATGGCAGTCTTGCAGCCTCCCCC
AGGCTTAAGGTATTATGATCATTGCAAAACGACCGCACCCCTCTTTGGAG
AGACTGTCCTGCGCATGATTGACACTGGTCGACTGCAGCATCTGAAGACG
TTGGCGATTTTGCGTACGTGGGATTTCTATAACCACAAGCACGGCATTGA
TATCTCTTGCGGGGCGTCAGCGGCGATCGTGCGCGTGCTTGCTTTACGAA
AATCGGCTGCGTATACCAGCGGCTCTGGCGAGAGCAGTGAATCTGTGGGC
ACCAATGCAGAGCAGCCCGTGGAGTGGAATGATGATCTGCTTGCGATGGA
TAGGCAGGATGCGCTTGATCAAGCACACATGCCATCCTATGTCTCTAGTC
TGCAAGATGGAGGTGATTCAGCAGTGGGAGGTTACGTCTATTGCTCGGGA
CAGTATCGTTTATGGACGGGGAAAAGATTCGCTGACAGATTCATGACTGC
CAGCACTGTCAACAGCCTTTTCGACCAGACGAAGATCCTGCCTTGCTTCC
TCTTCGGTTCCTTTCTCGCGCCCAACGACCGCCCGAATTTTTATCGGTCG
CTGATTGAGTACATGTTGGGGCCGACGAGGGAGGGTCGAGAGATGACGGT
GACGGCAGACGTTATGGAGCTGGATGGACACGTCTTCAAAGCCCTTGTGC
GGGCGCGTTACATGGTCTTGAATGAAGGACAGTACTCGTGTTTCGCCCTA
AGCTTTTTGCAGATCCCGGGGTTGCCTGTTCGATTTGTGCCCCCAACCAT
TCATCCCTCTTCTATCGCATCCGCAGCGGCAGATCAATCGAGATCTGATG
CGTGTCCCGACGTTTCAATGGCTTCCTCCCATACTCGTGGAGCGGCACCG
CATGCGAAAAAGAAGACTTCTCCGGCAAAGCATCGTACGGTGGATATGGG
CGTGAATCTGGTGGATGGGAGACGAGAGGTCAATCAGGCGGAGGAATATG
GTCGAGGAGAAGAGTCCCGAAGGATTCCGGCAGCAGGTGGCCGACGCCAA
GTGCTGGAACAGCGGGCGGGGAGATAGCCTGTGCTGAGAACAAGTCTTAC
GTAAGACTTCGCACCGGGGTCGACTCCTGCATCGCGGAGAATTGTATGCG
GCAGGGCTTCCCCGACATCACAAATTGCACCACTAGAGAACCAAAAGTAT
CAGCAACAACTTGCGTAATGTACATGTTATTAAGTGCTAACAGCTAAACG
ATACAGACCGTGATTTCTTGAACGAGTGAGGAGCGAATAGGCCACACGCA
ATTAAACCGCAAAACTCTCTCAATACATAAGGGTTTGATAAGTCAACAGA
AGTGTTAGAAAAAAGTTTTGTCAGATGCTAGGCGAATTCTAATGTGCAAT
GTATACGAGGAAGGGGAAAGTTTGAAACTGTAAGAAATGAAAAGAAGGAA
CACTGGCTTGAGGGTAATGTTTAAGGACACTGCGCAGGCTGTGATTGAAA
ATACATTGAAAAATATAAGATGCTCGGTTTGACCCAGCCAGAGCTTTACA
ACGCTTAAGAACTTTTTCGTATCAAGCCAAATCGTATCGGTACCACACGT
CTAAGAGCAGGAAGGAGAACGGATAATGCTCTCGAGGATGAGGCAATATT
TCTCTGTGGTATCAAGACGCTTGCCTCCCAGCCGGACATAATCCTCCGAC
ACGACCACTAGAGCATGTATGCATAGGGATTAAATATGGGTTTTCGAACT
TAGCACGTAGTCTCATACTTGTAAAATCGCCCCCTGATGTGGCTGATACC
ATGCAGTGAGGGAAAAAAGGCTTGCTCCAAATTGTGGTTCAGAGAAGG back to topCoding sequence (CDS) from alignment at CM002459.1:810564..815111- >rna2619 ID=rna2619|Name=rna2619|organism=Nannochloropsis gaditana|type=CDS|length=2808bp|location=Sequence derived from alignment at CM002459.1:810564..815111- (Nannochloropsis gaditana)
ATGCAACAGCGCAGGCATGTACGGGGACTTCATATGCTGAAGAATATGGA
CGTCTCCATGCGTGAGGACGCGGAAGGGCAGCGTCAGGGCCATCCGCGTC
GAGGCGTCTGTCACTCAACTCATCCCAGACGCGAAGAAACCACGTGGGAC
GACTCTGAGAGGGAACAGGAAATATTTGCTCTGTACGACGAGGCAGATGG
AGAACGATGTCCATCTGCACCTGCCTCTCCAAGTCATTCCGGAATTGACA
GCGACGGGGCTCTGTTGCGGTACACGTGTAAGGGTTGTCGAAAGTCGAAG
GTGCGCTGCGACCGTGTTTTCCCTTGTCAGAGATGTGTGCGATTGGGGAA
AAAGTGTATTCCCCACTTGCGTCGGAACGGGCGATTGAATCAATTCGCCC
CTACATCTCCATGCTCTGGCAATGACATCAAGCGATCGGTGGTGTCGAAA
AGGGACAAAGACCCGGCAGAGTACAGCACGCAACAGCACACGCGACAAGT
GCAAGAGCGAGGGCTCAGGCCAAAAATTGGCGAAGACCAATGTCAACCAC
AAGAGCAGGATCACTTTCATCAACAGCGAATGCATCCACCAACGCATGCC
ACGGGGCACGTGTGCAGCCGGCACCTGCCCCAGTCAGAGGCATGCGCGCC
GGTCTCTGCTTTTCCATCTGGCAACTCGTTCGACATATCTCACCCACGTT
CTCCGCCAAAACAATTCAAAAACACATATCACGCCCATGACCTCGGCCCG
GAGAGGCCTGCGGGTATCCGTCATACTGGCGAGTCTATGGACCAGATGAA
AGAAGACGCATGGGTGGCTGCCTCCGGGAGACCGGAGGGCAGACAGAGAG
GCCACGGCGAACGCACTCGTCAAGCGGCTGTCCGCTCCATCGCACGCGAC
ACCACAGCTTGCAATCAACACTCAGTATTGGAACTTGGTCACTATGGACC
ATGCGGCCAGGTGGATGCTGGGAGCAAGTCTAAAACTAAAACACCCCCCC
CGGAAAGCGTAACCAGTGCGAAGCGAGACGTGCGCAGGAGCTATGGCGAG
AAGGGAGGCAATCGACCGCGACCCATTGCCCCGGATGGTTATGTCCCTCT
CTCGGTGTCCTTCGAAAGTTCATCACAACACGTACAGCGTCATCCCGGCA
ACCGTGAGCGGCAAGGCCCCTCCAACCGTGAGCGGCAAGACCCCTTCAGC
CGTGAGCGGCAAGACCCCTTCAGCAGCGTTCCCTCCGATGCTTTGCCCGA
GCAAGGCTCGGCCAAGCATGCGAGACATCGAGAGACGCCTGAACACGCCA
TGGTTAAGCCTGTTTGCTACTCGCTGCCTGTTTCGGAGCATGGAAGTGGT
CGTCCGGGTATGCGTGATGTCGCCTGTGGATCGGCCACGGCAATGGAAGA
GGACATGGGACTGTCCTCGCTCGAAGGCGATGGTCAAATCGGAAGGCTTC
CTAAGAACCCCGACCCGGCATTATCTTACCACTTCCGATGGAGACGATTT
CCGGGGCAAGAGGCGATGGCGTCCTGCTCGTTTGTGCCCATAACCGGGAA
CGTGCTCAGCGCCGACGATCGCCCCTCCTTGACTCTGCTTTCACCGGATT
CGTATGACGCGGAAGTCGCCCCCTCCACGACCTACCCGTCAATTGACTCC
CTATCTTCGTGCACTACAGAGGCCACAAATTCAAGCAGCCACGGCGGCAG
TAAGGCGCACGCCTCCATCGTCATGATGCCGGACGGAGGGCCCCCCTCCT
GGGCTCTGATGGCAGTCTTGCAGCCTCCCCCAGGCTTAAGGTATTATGAT
CATTGCAAAACGACCGCACCCCTCTTTGGAGAGACTGTCCTGCGCATGAT
TGACACTGGTCGACTGCAGCATCTGAAGACGTTGGCGATTTTGCGTACGT
GGGATTTCTATAACCACAAGCACGGCATTGATATCTCTTGCGGGGCGTCA
GCGGCGATCGTGCGCGTGCTTGCTTTACGAAAATCGGCTGCGTATACCAG
CGGCTCTGGCGAGAGCAGTGAATCTGTGGGCACCAATGCAGAGCAGCCCG
TGGAGTGGAATGATGATCTGCTTGCGATGGATAGGCAGGATGCGCTTGAT
CAAGCACACATGCCATCCTATGTCTCTAGTCTGCAAGATGGAGGTGATTC
AGCAGTGGGAGGTTACGTCTATTGCTCGGGACAGTATCGTTTATGGACGG
GGAAAAGATTCGCTGACAGATTCATGACTGCCAGCACTGTCAACAGCCTT
TTCGACCAGACGAAGATCCTGCCTTGCTTCCTCTTCGGTTCCTTTCTCGC
GCCCAACGACCGCCCGAATTTTTATCGGTCGCTGATTGAGTACATGTTGG
GGCCGACGAGGGAGGGTCGAGAGATGACGGTGACGGCAGACGTTATGGAG
CTGGATGGACACGTCTTCAAAGCCCTTGTGCGGGCGCGTTACATGGTCTT
GAATGAAGGACAGTACTCGTGTTTCGCCCTAAGCTTTTTGCAGATCCCGG
GGTTGCCTGTTCGATTTGTGCCCCCAACCATTCATCCCTCTTCTATCGCA
TCCGCAGCGGCAGATCAATCGAGATCTGATGCGTGTCCCGACGTTTCAAT
GGCTTCCTCCCATACTCGTGGAGCGGCACCGCATGCGAAAAAGAAGACTT
CTCCGGCAAAGCATCGTACGGTGGATATGGGCGTGAATCTGGTGGATGGG
AGACGAGAGGTCAATCAGGCGGAGGAATATGGTCGAGGAGAAGAGTCCCG
AAGGATTCCGGCAGCAGGTGGCCGACGCCAAGTGCTGGAACAGCGGGCGG
GGAGATAG back to top
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