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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100026g55.10672.mrna |
| Orig protein id | gnl|cribi|Naga_100026g55.10672 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:659492..661507 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna261 ID=rna261|Name=rna261|organism=Nannochloropsis gaditana|type=mRNA|length=3403bp
TGCGCTAATCAAGTTTCACGTATAGAAATTTGACCTTGCGTGGATCCCTC
GATACTTTCGTCTTCCATAATAGTTCGCATGGCGGTCAGGAAGAAGCGTG
TCCGTAGGGGCATGAAACCACGCCTGCCACCGCGGTTCCCTCAAGCTACT
TATCACGGACAACACCGACAACAAGAAGATAGCATGAATGTAACTTCAGC
TGTCATGAACAGGCTAAAGCTAAGTGGTGACAAATCCTTAGCGTCCCCTT
CGTCAAGCACTTCCCCGAGGTCTGCGTCCGCTTCTCCCTTCTCGTCATCC
GTTGCGTCTTCTCACTCTTCCTCCTATTATTCGTCAACCGAAGACGACGA
AGGAGAGGAAGGGTATAGACCAGGCGGGTATCATCGTGTGCAGATCGGCG
ATGTCTATAACAAGGGGCGCTACTTGGTCGTGAAGAAGCTAGGGTGGGGT
CATTTCTCCACGGTCTGGCTTGCACGCGATTTGCATGTTTTGAAGGCCGC
GAGGCAAACTGATCAAGGCAAATTAAAGGAAACTTCCACACAGGAAGAAT
ATGTGGCGCTGAAGGTACAGAAAAGTGCACAGCACTACCGAGAAGCGGCG
TACGATGAGATCGAGCTGCTGACTGCTGTAAATAGTGCTGGGATGCTTTT
GGAGGGACATGATTCCAAAGATGACAGCCGGCGCGTGGTTCGATTATTGG
AGCATTTTGAGATTCGAGGCCCGAATGGGCGCCACGTGTGTATGGCCTTC
GAGGTTCTAGGCTGCAACCTACTGTCTGTGATCAAGCAGACAGAGTATCG
CGGTCTCCCTCTCCCGCTAGTGAAAAGCATAGCGCGACAAGTTTGCCAAG
GTTTGGATTTTCTACACCGCCGTTGCCGTATCATCCACACAGATCTTAAG
CCAGAGAACATTTTGATCGAGCTGCCACTGCAGCTGGGGCCGGAGGAGAG
GGCCGTGCGGCCGGGTCGGGGGCTGGCGTATGCGGGTTCCCCTACAGGCG
AGAATGGGAAGTCGTCAGGGCGCAAAGGAGCGGCCGAGACAAAAGGCGTG
GGTGAGATAAAGTCGGAGGGTGGAGTTGACTTATCGAACTTGGCGCCTGA
GGAGAAGAAAAGAATGAAAAAGAAGCTGCAGAAGAAACGGCAGAAAGCCC
GGAAGAAAGGACTGTCGATGATGACGGAGGAAGGATGGAGCGAGGAAGAA
AGAAATGGACATGCGGGTAGAGAGAGCATTAAGAGCGGTGATGCAAGCTC
TTGCGACCAGGAGGACAGGGCGATGAAAGGGGAAGCGATGGGGGACGGCG
TAGAGGGGCAAGGCAGGGGCTTTGCCGAGCCTGTACTACCGCCTGGAAGC
TGCTCAGGGGAGGAGGATTGGAGAAGGCTGCTTCGGTACAACGAAGAGCC
TTGTCGCTCCAATATTTATGGCCCAGAGCAGGCTCCTTCTGTGTCTTTGC
CCGCATCACGCTCAAAGACAGTCGGGGAGATAAGCGAGCTGCCGAGCCCA
CACTTTTCTGACGCGAGACTGGAAGTGTTGCCCCAGGAGGCATGGTCGGA
CTCACAAGAAAGGAGAAAGGTCACGATGGTAGTGTCGGCTGACAAACTGC
AACGCGCTTTTGCCATGGAAGACGCGAGATGGCAAGAGGCCTGGGGTCAC
AAGGGGGCTTCGTGTCCGGAGAAGGGAGATGCAGTGATACGGGGATGGCA
CTTCTGCTTTCACACGCGCTCGCACCCGGTAAATGGTGAAACAGAAGACA
TGATAGCGGATAAAGTCGCTTTTTGGGTCGAACCTCTTGACGAGAAGGTA
GACTTGCCGGCCTTGAAAATGGCTTTTCTGCGATTCCAGGACGAAGATGG
GAGGCGAGACACCGCCGCTGGCTGTGCTCATACGGGCGATTTGTTTGAAA
ATGATGGGCAAAAAAGGTGGAATGTGCATTACAGTACAATGCACACAGGA
GTGGTGCTGGAATTTCTGGAGCACCGTGTCCCGGGACTGAGATTTTTAAG
CATCCTCCCTGAGGCCTTTCCATCTCTGACATGCGGTTTGAGCGACAGCA
GCAAATTCAAGGAGTCAAACGAGGCCGAAGCAAGCGAGTGGGGTCTACTT
TGCCATCAAAGACAAGAAGAACAAAACACCATACATCTTTCCCGAGGCGC
CCACATGCAGCTCGAAGGGGGAAAAGAAAGCGAAGCACCAATTGTGCTGG
TAGGCCTGGATATGGGCGCGATCTTAGCTGGGCTGCGAATACAGGATGGC
AGAATGTTGATTGAGATGGTGAATTTTATTCCACTGCAACGTCGCTTGGA
AGTCCTTTTTAATGGCTGTGTGGGAGGACGCGACAAGAAAGCGGACAAGG
ATGTAGCCAGGCTTGAAAGCGCTCCTCTTGTAGCCAGCAGCGAGGACAGG
CCTGTGCCCTCTTCTGATGGTCCTTTCGCTCGTCCTTCACCTGTGGCAAT
AGACTTGGAGCAGCTGGTTGGGTCCCGTGTTGTTGTAGTTGATCTGGGGA
ACGCGTGCTGGACGCACAAGCACTTCTCGGAGGATATCCAGACGCGGCAG
TACAGATCGCCCGAAGTCTTGATAGGAAGCAAGTACGACACAAGTGCAGA
CATGTGGAGTATGGCTTGTTTGATCTTTGAGCTTATGACTGGGGACTTGC
TTTTTAATCCACGGGCAGGGGAGAATTACGGCCGGAATGAGGACCATCTC
GCGCAGATGATGGAGCTGTTGGGAAAATATCCAAAGAGGCTTGCCACGGC
CGGTCGGTACTCCCGAGAATTCTTTAATCGGAAGGGTGAATTGAAACACA
TTCATTCCCTTAAATACTGGAGTCTGGAGGAGGTGTTGCGTGAAAAGTAC
AGATTTTCCCAGAACGAAGCACGGGCGGCTGCTGATTTTTTGGTCCCAAT
GTTGGATTTCAACCCGCAACGCCGTGCTACCGCTCAACAATGCTTGGCCC
ATCCCTGGCTCGCATCGTTAGACGCTGGTGACAGCAAGCTCCCATCGCGA
TATCCTCTGGCCAATGCAGCATCTCCTAAGATCGCACAAGGGCTTCCATC
GACAATTCAGGCAAATGTGCCAAGTCCTGCGGCTAGGGCAATCGGAGAGC
AGGTGATGGGGCAGATTGAGGAGGACGACACAGTGGCCTTGGAAGCAGCA
GCTGTGGCGATGGGCAACGAGTTATTGACAGAGGCAGAGAATGGGCCGCT
AAGTAGAGCACTGGAATGAGACAGTAGAGGCCCCTTCACGCATCTTTTTT
TTCCAGCTGCCACTTTTAAACCTTTTATTCAAATCTAACTGTTACATATC
CGAAGAGTCCGACGCAACTAACGCAAGTGCACATGAGAGCATGAACGCAA
AAGTCTCGACTATAACTAGTACCCTATATAATTTTACTTTGCACCAGAGC
CGA back to topprotein sequence of rna261 >rna261-protein ID=rna261-protein|Name=rna261|organism=Nannochloropsis gaditana|type=polypeptide|length=308bp
MPAASSPAQNSSFPKTWGGYVETILPLVAAFLVVPVEDARELPEWLREIY
SWGLVTSKFAHEHLVFSRAAWNEGKWWTILTYCFSHQDVSHLLNNLFSLT
FAGMNVYNHTSTALEFYTIFFSSAGLSAYLTTRKNELQLMPMAKSFVPRN
PFPSSWIRLHGWYNSQANKIAESTGHFFSQFVQYRGASAGIFGMVGALAM
IEVEEAWLWMRDVWSCIREYGSVATSTRKRLALRCFALCYNALSIRGAVQ
NEFMLRSTNDGIGHNFHLDGFISGSCIYVAIKCARGLGAYIRRHEIQRRV
GRSRKGRS back to topmRNA from alignment at CM002455.1:659492..661507+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna261 ID=rna261|Name=rna261|organism=Nannochloropsis gaditana|type=mRNA|length=2016bp|location=Sequence derived from alignment at CM002455.1:659492..661507+ (Nannochloropsis gaditana)
TCGTACGGCAATCGTTCCTATCGATGAATGCGTTTTGTGTATCGACGTCT
AATGCTTTTCGAATTTGTAATTGTTGCTTGGATCTCATATATACAGCTGA
AAAGGGTAAGCATTCAAAGTAGAGTGGTGCGTGCTTGCGTAAAGCGAGGA
CTTCCAGGGAGTGCGTTTACTCCTTCCCCATTAACATGCTAAGTATGAAA
AACAGGGATTTACCTACCCGGCACTTGTACCAAAAATGAGTTAGAAAATG
CCAGCTGCTTCGTCACCCGCCCAAAATTCGTCATTCCCCAAAACATGGGG
AGGATATGTCGAAACAATCCTGCCTTTAGTCGCTGCTTTCCTAGTGGTgc
ccgtggaggacgcgcgcgAACTGCCTGAGTGGCTGCGCGAGATATATTCT
TGGGGCCTTGTCACTTCAAAATTTGCCCATGAGCATCTAGTTTTTTCCCG
GGCAGCATGGAACGAAGGAAAATGGTGGACAATATTGACGTACTGTTTCT
CGCACCAAGATGTTTCTCACCTTCTCAACAATCTCTTCTCGCTGACCTTC
GCCGGCATGAATGTGTACAATCACACCTCTACCGCCTTGGAGTTCTACAC
CATCTTCTTCTCGAGCGCGGGTCTTTCGGCATATTTGACCACCCGAAAGA
ATGAGCTTCAACTCATGCCAATGGCAAAGTCCTTTGTGCCCCGGAatcct
ttcccatcctcttgGATTCGCCTGCACGGATGGTACAACAGTCAAGCAAA
CAAAATTGCGGAATCTACAGGTCATTTTTTCAGCCAATTCGTGCAATATC
GTGGTGCCAGTGCTGGCATTTTTGGAATGGTTGGTGCCTTGGCAATGATA
GAGGTTGAGGAAGCTTGGCTGTGGATGCGCGACGTGTGGAGCTGCATTCG
AGAATATGGCAGCGTTGCGACATCAACTCGCAAACGGCTTGCTCTACGAT
GTTTTGCACTTTGTAAGCATGGGTTTGTAGAGGCTTCCAGTGTGAAAAGG
GTCCAgcctttttgggggggggggttgcgTAAATGAACTGCTTCATGCGA
AAGTGCGTTGACAAGTATTTGACTTGGTAAGACTCTTCATTTTACTAACT
CATGAGCAATTTACATCCTCATCATAGGTTACAATGCATTGAGCATTCGG
GGTGCTGTACAAAACGAATTTATGCTCCGAAGTACGAACGATGGCATTGG
TCACAATTTCCATCTTGACGGCTTTATTTCAGGCAGTTGCATATACGTCG
CGATCAAGTGCGCGAGAGGTTTGGGGGCTTATATCAGAAGGCACGAAATA
CAAAGGAGAGTCGGGCGCAGTAGAAAGGGGCGGTCATGAAAGTAAAGCCC
GGAAAGGGCGAGAGAATTACCATAAATCCCGAGCAGCTGGGAGCTTACTT
CGACGGATCATAACGGATTCATTTCTTTGATTTTTAAAGATGGCTCTGTC
CTCTATATCCACGTACCTTTAGCGAGTCTTGCTTGTATTTTAGTCTGTCT
CTGGACCATCTGTAGGAAATGCGGTTGTTGCAGCGAGCAAGCTTTGATAT
CGGGGCTTGTTGTACCGCATTATTGTGTAGGCTATGAAATTTAGTGCGAG
TGTAAGAATAATTAAGCCTGCTGCTCCATCCCACACTGTGCTTCCCGCGA
AACCGATATTTGCAATGGCTTCGGCGCCTGTTGCAAGGCAGTGTCTGTCT
TGCTCTGTACACGTTAGCGTCGTGCCTTCGAACTCGTTCACCACAAGGGC
TTGAAAGGACCATTTCATCAGCGACAAGTCAGCCACCCACTGGGCTGCTG
CCGGTAAGGACTGTATGCTTATGTAGAACCCGCCTGAGATAAGCATGACA
ACCGAGATAGGATTGGCCAGGATGGTTGCCACTTcagcggacgaggagac
tgAACTAATCGCCATGCCTAGGGCGACTGCAGCAATAGATTCCAATGTTA
TGATGCCCATAAATGCCATAAAACGTCCAAACTCCGGTCGTAGATGGGCC
ATCCAATAGACAATCG back to topCoding sequence (CDS) from alignment at CM002455.1:659492..661507+ >rna261 ID=rna261|Name=rna261|organism=Nannochloropsis gaditana|type=CDS|length=1854bp|location=Sequence derived from alignment at CM002455.1:659492..661507+ (Nannochloropsis gaditana)
ATGCCAGCTGCTTCGTCACCCGCCCAAAATTCGTCATTCCCCAAAACATG
GGGAGGATATGTCGAAACAATCCTGCCTTTAGTCGCTGCTTTCCTAGTGG
TgcccgtggaggacgcgcgcgAACTGCCTGAGTGGCTGCGCGAGATATAT
TCTTGGGGCCTTGTCACTTCAAAATTTGCCCATGAGCATCTAGTTTTTTC
CCGGGCAGCATGGAACGAAGGAAAATGGTGGACAATATTGACGTACTGTT
TCTCGCACCAAGATGTTTCTCACCTTCTCAACAATCTCTTCTCGCTGACC
TTCGCCGGCATGAATGTGTACAATCACACCTCTACCGCCTTGGAGTTCTA
CACCATCTTCTTCTCGAGCGCGGGTCTTTCGGCATATTTGACCACCCGAA
AGAATGAGCTTCAACTCATGCCAATGGCAAAGTCCTTTGTGCCCCGGAat
cctttcccatcctcttgGATTCGCCTGCACGGATGGTACAACAGTCAAGC
AAACAAAATTGCGGAATCTACAGGTCATTTTTTCAGCCAATTCGTGCAAT
ATCGTGGTGCCAGTGCTGGCATTTTTGGAATGGTTGGTGCCTTGGCAATG
ATAGAGGTTGAGGAAGCTTGGCTGTGGATGCGCGACGTGTGGAGCTGCAT
TCGAGAATATGGCAGCGTTGCGACATCAACTCGCAAACGGCTTGCTCTAC
GATGTTTTGCACTTTGTTACAATGCATTGAGCATTCGGGGTGCTGTACAA
AACGAATTTATGCTCCGAAGTACGAACGATGGCATTGGTCACAATTTCCA
TCTTGACGGCTTTATTTCAGGCAGTTGCATATACGTCGCGATCAAGTGCG
CGAGAGGTTTGGGGGCTTATATCAGAAGGCACGAAATACAAAGGAGAGTC
GGGCGCAGTAGAAAGGGGCGGTCATGAATGCCAGCTGCTTCGTCACCCGC
CCAAAATTCGTCATTCCCCAAAACATGGGGAGGATATGTCGAAACAATCC
TGCCTTTAGTCGCTGCTTTCCTAGTGGTgcccgtggaggacgcgcgcgAA
CTGCCTGAGTGGCTGCGCGAGATATATTCTTGGGGCCTTGTCACTTCAAA
ATTTGCCCATGAGCATCTAGTTTTTTCCCGGGCAGCATGGAACGAAGGAA
AATGGTGGACAATATTGACGTACTGTTTCTCGCACCAAGATGTTTCTCAC
CTTCTCAACAATCTCTTCTCGCTGACCTTCGCCGGCATGAATGTGTACAA
TCACACCTCTACCGCCTTGGAGTTCTACACCATCTTCTTCTCGAGCGCGG
GTCTTTCGGCATATTTGACCACCCGAAAGAATGAGCTTCAACTCATGCCA
ATGGCAAAGTCCTTTGTGCCCCGGAatcctttcccatcctcttgGATTCG
CCTGCACGGATGGTACAACAGTCAAGCAAACAAAATTGCGGAATCTACAG
GTCATTTTTTCAGCCAATTCGTGCAATATCGTGGTGCCAGTGCTGGCATT
TTTGGAATGGTTGGTGCCTTGGCAATGATAGAGGTTGAGGAAGCTTGGCT
GTGGATGCGCGACGTGTGGAGCTGCATTCGAGAATATGGCAGCGTTGCGA
CATCAACTCGCAAACGGCTTGCTCTACGATGTTTTGCACTTTGTTACAAT
GCATTGAGCATTCGGGGTGCTGTACAAAACGAATTTATGCTCCGAAGTAC
GAACGATGGCATTGGTCACAATTTCCATCTTGACGGCTTTATTTCAGGCA
GTTGCATATACGTCGCGATCAAGTGCGCGAGAGGTTTGGGGGCTTATATC
AGAAGGCACGAAATACAAAGGAGAGTCGGGCGCAGTAGAAAGGGGCGGTC
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