EWM30418.1, cds261 (CDS) Nannochloropsis gaditana

Overview
NameEWM30418.1
Unique Namecds261
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:659739..660453 +
Alignment locationCM002455.1:660619..660830 +

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Properties
Property NameValue
Protein idEWM30418.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100026g55.10672.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:659739..660453 +
CM002455.1supercontigCM002455.1:660619..660830 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004252serine-type endopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
Homology
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BLAST of EWM30418.1 vs. NCBI_GenBank
Match: gi|585113078|gb|EWM30418.1| (hypothetical protein Naga_100026g55 [Nannochloropsis gaditana])

HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 
Query:    1 MPAASSPAQNSSFPKTWGGYVETILPLVAAFLVVPVEDARELPEWLREIYSWGLVTSKFAHEHLVFSRAAWNEGKWWTILTYCFSHQDVSHLLNNLFSLTFAGMNVYNHTSTALEFYTIFFSSAGLSAYLTTRKNELQLMPMAKSFVPRNPFPSSWIRLHGWYNSQANKIAESTGHFFSQFVQYRGASAGIFGMVGALAMIEVEEAWLWMRDVWSCIREYGSVATSTRKRLALRCFALCYNALSIRGAVQNEFMLRSTNDGIGHNFHLDGFISGSCIYVAIKCARGLGAYIRRHEIQRRVGRSRKGRS 308
            MPAASSPAQNSSFPKTWGGYVETILPLVAAFLVVPVEDARELPEWLREIYSWGLVTSKFAHEHLVFSRAAWNEGKWWTILTYCFSHQDVSHLLNNLFSLTFAGMNVYNHTSTALEFYTIFFSSAGLSAYLTTRKNELQLMPMAKSFVPRNPFPSSWIRLHGWYNSQANKIAESTGHFFSQFVQYRGASAGIFGMVGALAMIEVEEAWLWMRDVWSCIREYGSVATSTRKRLALRCFALCYNALSIRGAVQNEFMLRSTNDGIGHNFHLDGFISGSCIYVAIKCARGLGAYIRRHEIQRRVGRSRKGRS
Sbjct:    1 MPAASSPAQNSSFPKTWGGYVETILPLVAAFLVVPVEDARELPEWLREIYSWGLVTSKFAHEHLVFSRAAWNEGKWWTILTYCFSHQDVSHLLNNLFSLTFAGMNVYNHTSTALEFYTIFFSSAGLSAYLTTRKNELQLMPMAKSFVPRNPFPSSWIRLHGWYNSQANKIAESTGHFFSQFVQYRGASAGIFGMVGALAMIEVEEAWLWMRDVWSCIREYGSVATSTRKRLALRCFALCYNALSIRGAVQNEFMLRSTNDGIGHNFHLDGFISGSCIYVAIKCARGLGAYIRRHEIQRRVGRSRKGRS 308
The following BLAST results are available for this feature:
BLAST of EWM30418.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113078|gb|EWM30418.1|0.000e+0100.00hypothetical protein Naga_100026g55 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna261rna261Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications