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Properties
| Property Name | Value |
|---|
| Product | ubiquitin family protein |
| Orig transcript id | gnl|cribi|Naga_100044g34.1089.mrna |
| Orig protein id | gnl|cribi|Naga_100044g34.1089 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:768467..769904 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2605 ID=rna2605|Name=rna2605|organism=Nannochloropsis gaditana|type=mRNA|length=2032bp
GGAGAAATACCAATAGCGGCCCAGGTTGAGTGTGCAATGCAGACAAGGAT
CACCGTCACCAGCGCCAGAGGGCTCGAGCACCGGATGCGGTTTGGTCTTG
AGGCCATGGCTCGTACAAAGAATGGCTGCTTTAACAAGATGAAACGAATG
AGTCGTGGATGATTATTGTGGGAGATTACCACCGCCACATGATGCGTGAT
GAGCTTTCACGGGGTGTCCCGTGTCCTCAAGCCAAAGCGATAAAAAGTGC
AACGTGGGAAGGCGGAGGCAGGAGGTTCTTCCACATGACAAGTAAAGTCA
CTGAATAAAAACCGAGACAACAACAAGAGCGATCTACCACGTGACTGATA
TTATTGCAACAGGTGGATGAGGAGTCGGACGCCCTTGTTGCAGTTCTTGG
TGGCCTCTGTCTCTTCGTCCTCGTCGTTCGCTGCGGGACCTACGTCGCAC
GCGCACCCCCGTCCTCATCAGGCCCTAGCCTTCGTTACACATTCATTGGC
TTGGGGTTCCATTCGGGCGATTTCTTCCTCTATCACACTAGCCTCTGCGT
CTTCTGTGGGTGATCTTCCGGCGGCACTCAACGAAGGGGGAAAGGGCGGC
ACCTGTCGTTCTTTTTCAGGCGTTCCGCTCCACAGCGACAGCAACAGCAA
CAACATGGGGGACCCCTGCAAGGGCTCCGATGCCGCTGTCTCCTCGTGGC
GACAGCGCATCACACTCTTGACACAAAAAGAAGCACAGGCTATCGACGAA
GAGCTCATGGGTACGCCGGGTTTCTCGGTGGACCAACTGATGGAGTTGGC
GGGTCTGAGTGTGGCGAGTGCCATCCATGATTTCCTAGCGCAGCCGACCC
GGTCTGCCTCCATCTTGATCCTCTGCGGTCCTGGCAACAACGGAGGGGAT
GGCCTGGTCGCTGCGCGACATTTATATCACTTTGGATACCGTCCTGTGGT
GGTGTATCCCAAGCGGCCCGCCCGCCCCCTGTTTACGAACTTGGTGAAGC
AATGCGAGGATTTGGGAATCCATGTGGGGGTAGACATGCCTGAGGACATC
GAGGCCAAGTTTGACTGCGTGGTGGATGCCCTCTTCGGCTTCGGGACCGC
GGGCCCGCTCCGCGCTCCCTTTGGAGAGATGATGCAAGTGCTGAGCAAGC
TGACGACCCCGATCGTGTCGGTAGACATTCCGTCGGGCTGGGACGTGGAG
GCCGGGGACGTGTACGGCACTGGCTTCACACCCGACGCCCTTGTGTCCCT
GACCGCGCCCAAGAAATGCGCGGCTTTGTTTCGCGGACGTCACTACTTGG
GCGGCCGCTTTGTCCCCCCGGGGCTCCAGCACCAGTACGGCTTAGACGCC
CTCCCGGCCTATCCGGGGACCTGCCAGTGCGTGGAGATCGAGGGCTGGGA
CGAGGAGGGCGGGGACGAAGGAGACAAGGACCGCGATGGACGTGGGCGAG
AAGCTCCGGAGGACCGTGAGTCTACTGCGCGCGGGCGCCCCTCTGCCTCT
CCTGCCTCCGCATTGACCCCGGCTTCTACCCCGGAATTTGTGGTGGTGTG
GATCACCGCGCCCGATGCCAAGGAGGCGTCCACGTTGGCAGAAAGACTGG
TGGAAAGCGATCTGGCTGCCTGCGTGAACATTGTTCCGCGGGTGGAGTCA
GTCTACAAGTGGGAAGGAAAAGTGGAGAGGAACGGGGAGGTGTTGCTGAT
GGCCAAGACTCGGGCCAGCCTGGTCCCGGAGCTCTCGGCCTTTGTGACGA
AGCATCATTCCTACGATGTGCCTGAAACGATCGCGGCGGGCATTGTGGGG
GGTGGACCCGAGTACCTGAAGTGGGTACGGGAGAGCACGAGGGAGCCGGC
GGATGGAAGGGACACGGACTAGGTAGACATCGGCGGGAGAGAGAGAAGGG
ACAACAGAGGGGGTAAGATGTCCGCCCATGCGAAAAGTGCAGAGTCACGT
TGATACATAGAAAGGATTTGGAAGGGGAAAGCTGAGGCGGCGGGCAGTGA
ACAAAAATTTAGGTCAGCAGGCGTCCCTCCTT back to topprotein sequence of rna2605 >rna2605-protein ID=rna2605-protein|Name=rna2605|organism=Nannochloropsis gaditana|type=polypeptide|length=145bp
MASRPNRIRCSSPLALVTVILVCIAHSTWAAIGISPRLCTVTPFQRGNGR
QSPAFQRFMSVRGGMQINVKTLNGKTISVDVEEGDSIDEVKAKIAEKEGI
PPDQQRLIFGGKQLDGLKSLSDYDIGDDSTLHLVLRLRGGWPWVR back to topmRNA from alignment at CM002459.1:768467..769904+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2605 ID=rna2605|Name=rna2605|organism=Nannochloropsis gaditana|type=mRNA|length=1438bp|location=Sequence derived from alignment at CM002459.1:768467..769904+ (Nannochloropsis gaditana)
ctttcccccttcgttGAGTGCCGCCGGAAGATCACCCACAGAAGACGCAG
AGGCTAGTGTGATAGAGGAAGAAATCGCCCGAATGGAACCCCAAGCCAAT
GAATGTGTAACGAAGGCTAGGGCCTGATGAGGACGGGGGTGCGCGTGCGA
CGTAGGTCCCGCAGCgaacgacgaggacgaagagacAGAGGCCACCAAGA
ACTGCAACAAGGGCGTCCGACTCCTCATCCACCTGTTGCAATAATATCAG
TCACGTGGTAGATCGCTCTTGTTGTTGTCTCGGTTTTTATTCAGTGACTT
TACTTGTCATGTGGAagaacctcctgcctccgccttcccacgTTGCACTT
TTTATCGCTTTGGCTTGAGGACACGGGACACCCCGTGAAAGCTCATCACG
CATCATGTGGCGGTGGTAATCTCCCACAATAATCATCCACGACTCATTCG
TTTCATCTTGTTAAAGCAGCCATTCTTTGTACGAGCCATGGCCTCAAGAC
CAAACCGCATCCGGTGCTCGAGCCCTCTGGCGCTGGTGACGGTGATCCTT
GTCTGCATTGCACACTCAACCTGGGCCGCTATTGGTATTTCTCCGCGCCT
TTGCACCGTGACACCCTTTCAGCGGGGTAATGGGCGGCAATCTCCAGCAT
TTCAACGGTTTATGAGCGTTCGTGGGGGCATGCAGGTACGTGCGAGGATA
AAGCCAAGTGACGGATGGGGGTGAACCTTTGATGGGATCGAGGAAAGGgc
gcaaggagaaaaggtgaaagagagagTAAATTACGTGGATTATGGGATGC
AAAGAAAGAGACCAGTCTTGCTCCGGGGACCTGCCATACTACGTTGTGTG
AGGATTGAGACCCAGCAACAACACACGTAGGGGATGGATATCGGCTTCGG
CGGGGTGGATGCCGTGCGCTTTGCTGGCCATCACGAATGACTTTTCTCCT
GGCCCCTTTGATGTGCTGAGATGCACGTGATATACCTTCTTCTCAGTCCC
CGAGACGTTCCTTGTGCTCACCCAGTCCCTCCTTTGATTGCGCACAGATC
AACGTGAAGACACTCAACGGGAAGACCATCtcggtggacgtggaagaagg
cgattCCATCGACGAGGTGAAAGCCAAGAtcgcggagaaggagggcattc
CCCCTGACCAGCAGCGTCTCATCTTTGGAGGCAAGCAGTTGGACGGGCTC
AAGTCCCTGTCTGACTACGACATCGGCGACGACTCCACCTTGCACTTGGT
CCTGCGGCTTCGGGGGGGCTGGCCGTGGGTGCgatgaggagagaggggcg
gggccctTATCGAGTACGaaaggcggaaggaaggggtgcgggggggaagc
gaggcatggaaaggagggtgcaCATAGTCTAATCCCGGGATACCTCCGGA
CAAGGCATCTATCACAAGGCTCAGTCGAGTCTTCTCGC back to topCoding sequence (CDS) from alignment at CM002459.1:768467..769904+ >rna2605 ID=rna2605|Name=rna2605|organism=Nannochloropsis gaditana|type=CDS|length=876bp|location=Sequence derived from alignment at CM002459.1:768467..769904+ (Nannochloropsis gaditana)
ATGGCCTCAAGACCAAACCGCATCCGGTGCTCGAGCCCTCTGGCGCTGGT
GACGGTGATCCTTGTCTGCATTGCACACTCAACCTGGGCCGCTATTGGTA
TTTCTCCGCGCCTTTGCACCGTGACACCCTTTCAGCGGGGTAATGGGCGG
CAATCTCCAGCATTTCAACGGTTTATGAGCGTTCGTGGGGGCATGCAGAT
CAACGTGAAGACACTCAACGGGAAGACCATCtcggtggacgtggaagaag
gcgattCCATCGACGAGGTGAAAGCCAAGAtcgcggagaaggagggcatt
cCCCCTGACCAGCAGCGTCTCATCTTTGGAGGCAAGCAGTTGGACGGGCT
CAAGTCCCTGTCTGACTACGACATCGGCGACGACTCCACCTTGCACTTGG
TCCTGCGGCTTCGGGGGGGCTGGCCGTGGGTGCgatgaATGGCCTCAAGA
CCAAACCGCATCCGGTGCTCGAGCCCTCTGGCGCTGGTGACGGTGATCCT
TGTCTGCATTGCACACTCAACCTGGGCCGCTATTGGTATTTCTCCGCGCC
TTTGCACCGTGACACCCTTTCAGCGGGGTAATGGGCGGCAATCTCCAGCA
TTTCAACGGTTTATGAGCGTTCGTGGGGGCATGCAGATCAACGTGAAGAC
ACTCAACGGGAAGACCATCtcggtggacgtggaagaaggcgattCCATCG
ACGAGGTGAAAGCCAAGAtcgcggagaaggagggcattcCCCCTGACCAG
CAGCGTCTCATCTTTGGAGGCAAGCAGTTGGACGGGCTCAAGTCCCTGTC
TGACTACGACATCGGCGACGACTCCACCTTGCACTTGGTCCTGCGGCTTC
GGGGGGGCTGGCCGTGGGTGCgatga back to top
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