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Properties
| Property Name | Value |
|---|
| Product | vacuolar iron family transporter |
| Orig transcript id | gnl|cribi|Naga_100120g3.6956.mrna |
| Orig protein id | gnl|cribi|Naga_100120g3.6956 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:761920..764259 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2601 ID=rna2601|Name=rna2601|organism=Nannochloropsis gaditana|type=mRNA|length=1926bp
CAGGGTGTCGACCAGTACGATGGAACACGATCTCCCAGGGTGTCCGGTAT
TGCCTCCGTCGGCTTCGAACTGTTGCCGCGTGCGGAATTCGGGTGAAGGC
AGGGGCCGACATGTCATTGCCACGAGGCCGCTCCCAAACCCCGGAATGAC
ATTTCTTCGAGACAAGCCCTTTGCCGCCGTAGTGGCGGACCTCTATCGTA
ATACATGTTGTGCAGCCTGTCTTCATGTCTGTACCGAGCAGATCTTCGTG
TGCGGAGCTTGCAAAGTGACCTTCTATTGTTCGTCTGCTTGCGTCGCACG
TGACAGTATGATTCATGCTGGACCTGAGTGCCATGCATTGGTGGAACTGG
ATGCGTTCGGTGTGGAAGGAGACTCACAAGCGATGCGCTTGGCATTACGG
TTGGCCTGTCTGGCTGCGAAAGAAGAAGCCCGCCATGACAACGGTAAAGG
AGGCTCTTGCACAGCTCCTCCTTTAAATGCATTTCATACATCAACCTTTA
TCAGCTCTTTGGAAGACCACTTTGATGATATAAAAGATGCTTCGATCAAG
AATAGCATTCAGACTGTAGCTGATGCATTATCTAGCTTTCTGGAGAGCGG
CATAAAGGCAGCGAGGCCAAAAAATGAGATCCCCGCTCCTCCGCCGAGAC
CCCGTTTCGACATGGCCCGCCTGCTCCTTGCCATCCAGTGCAACGCCCAT
AGCATCCGAGACAGTTATGAGAGCAACCTAGGCCTAGGTGTCTACCCTAT
TGCCTCTATGCTCAACCACTCTTGTCAACCCAACGCCTACCACGTATTCC
GCTTCCATCAGGGGGAGGGGCCGCCTACGTTGCTCTTTAAGACTTTGCGA
GCCGTTGGAACCGGCCAGGAGCTGGTGTATAGCTACACCGACCTCATGCG
CCCTGGACAACTTCGGCGGGCAACCCTTGCTAATGCCTATTTTTTCTCCT
GTGATTGTCCGAGGTGCACTGTCACACTGCCAAAAGCGCATAAATATATC
GAATGTGAAAAAGACAATGGACAAGAAACAACGGACAGCGAGGATAACTG
CGTCGATAGTTCCCTGGAATGGTCGCTGCAGTCGATTGCATGCGATACAG
ACAGTTGCGCAGGGGCTTTTTGTTGCTCGGGTTCTGATGAGGAGTATTAT
TGCCTAGTGTGTGGCGCGAGGGAATCTTCGGCAGCTCTTAAAAAAAAACT
GACAGTTGCTACTGCGTTGTTGGAAAATGGCATTCGCAGATTGGAAACCG
ACAGTGAGCAGCACATAGCAGGACGGGATAAAGATACGTATACAGCGTCG
GAAAGTGCGCTTCCTGAGGTTTTGCGAGGCTTGGCCAATCTACTGTTCGC
CACCAACCGTCCTGCCGGACTGCACGTCCAGCATTGGATGATATATCATG
CTTTGCTATGTTTAAGCAATTATCTCATGGCTCCTGATGCAGGAGTTCAT
CCTTTAGAGCGAGAGGACGAAGAGCGGGCTTGGCTCAGAGCGGCATGCGA
GATATGGGCCCTTCGCAGTCTCTGGCGTTTGTGCGGCGGCCTGGAACACA
GCAAGGGCAGTAAAAGGATATTATTTTTTCCAGAGCTAGGTTCTCGCCTG
ACACGGATGGAAAAGGCACTGAAAGCGTACGCAAAGGCTTGCGGTGGCAA
TAAAAAATTTGAAGAGCATTTAAAATATGGGGCGTGGAGGTTGCCGCTGG
TAACTGAGGATGCGGAGGTGACGGGGGGGGGAAATAAGACAACTTTGGAG
AGCGTCAGAGAGATCCTGGGGAAAGATTTATAACGAAAGGTATACATAAC
GAGCATAAATACTTGTGAACCTTAGAAAGGAAACAAGAGACTGGAAAGAT
TGCACCGATGGACGCCGTAAGGCCTCTGGGCTACAGGGTCCCACGCAGGA
TACCCGGTTATTCCCGGCGACGCGCG back to topprotein sequence of rna2601 >rna2601-protein ID=rna2601-protein|Name=rna2601|organism=Nannochloropsis gaditana|type=polypeptide|length=300bp
MEIHTHMNGHSNGHASGNGIHPTEKTSLVQQAQHAYRLNDVEASRLIHQQ
KFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVM
VLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKE
MIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDIV
KEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFI
MGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGDTEGI back to topmRNA from alignment at CM002459.1:761920..764259+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2601 ID=rna2601|Name=rna2601|organism=Nannochloropsis gaditana|type=mRNA|length=2340bp|location=Sequence derived from alignment at CM002459.1:761920..764259+ (Nannochloropsis gaditana)
GCCTTTAAATTAACAAAACTTTTTTTTGGTGATGAGAAGATAGTCTTCTC
GGCTGAACCTGTACCACATCACAGaccttcgtctccttgccTACACAAAA
CAACTTGCAAAGGACAACAACAGCATTGTGAAGCACCAAGCGGGGTTTGA
TAGCCCGCGGTGGAATTCAAGAAACCACGTCGCCTCGTCTTTGTTTTCCT
CGTTGCCTCCAGGCGTGATAAAgcgcccgccctgccccggACGACGGCTA
CAGAACGCCGGCAGCAGAGGACACTTATTAACACTTAAGGGGAGTCCATC
CTTGTAAATCTGCACCAATGGAAATCCATACCCATATGAATGGACACTCG
AACGGGCATGCCAGTGGAAATGGCATCCATCCCACAGAGAAGACGAGTTT
GGTGCAACAAGCGCAGCACGCCTATCGTCTGAACGACGTAGAGGCCTCGC
GGTAAGCATGCTCGGAGGCCCTACAATTGTCACTATCATAGGAATCTGTT
GGCGAAGATCGTGATAGATTTCAGCTCTGTGTATCTTCTCGCACGCTGAA
AGCTATGTATGCACCGCTCTTCCCGAGGGACCTTTGACTGATTCGTTTAC
TTTCCCGCGTTCTCTTTCGCGATACAATTTTAAACAGGCTCATCCATCAG
CAGAAATTTGAGGCAAAAACACATGATGAGACTCATGATTCTGTCGGAGA
TTACGTCAAGTCCATGATATTTGGGGGGTTGGATGGTATTCTCACGTCCT
TCGCCATTGTTGCGGGAGCCGCAGGGGGAGGATTGCCTGTGGAGGTTGTG
ATGGTTTTGGGCTTCAGCAACATTTTTGCTGATGCATTTAGCATGGGCAT
GGGGGAATATTTGAGCTCGAAGGCACACAATGAGTTTGTcttcaaggaaa
aggaacggGAAAGCTGgtaagggaagggagggagggacaccTGCGATAGC
AGGGCGGGCAGTGCTCAGCTCTTTGAGCCGTAATGGATGTACCTGTGGTG
TTTTGCCCCGTAGTACCAGGCAAATCTTGTCTTTTGAGACAAACGTGCTG
AAGCAattctccctgtcctccgtGGCAATCCTCTGAAAAACGGTACAGGG
AGCTGCAAAACTTCAGGGAAGGCGAGATCAAAGAGATGATTGACATCTAT
GTGGAGAGAGGCATGGAACCGGACGATGCTGAGGTATGCAGCCAGAGGGT
TTGGTTGGGATCTGAAGTTGAGTGCACGAGGGAGCTCTTTTCACACAACT
TTCTTTTGCCTTTTCGCCGCCATGGCATCCTCCCAATACTGTTGCAGGAT
GTGGTTCGAAAGATGTCAAAATACGACGACTTCTTCGTGAACgtgatgat
ggtggaggagctcgggCTTCAGGTTCCCGACCCGAACGACGACATcgtca
aggagggggtggtcaTGTTTCTGTCATTTGCCGGCTTTGGGGCCATGCCT
CTTCTAGGCTACGCATTGATACCTCTATGCTTTCCGTCTTTGGGCCCCTC
GCATTTATTCAATATCGCCTGTGGGGTTACTGCTCTGACCCTTTTTATCA
TGGGCGCCGTCAAGAGCAAGTTTTCCACGCGGGGTTGGCTGCATTCGGGC
TTGGAGATGCTCGTGTTGGGGGGTATATGTGCGGTCATGGCGTACGAGAT
CGGGCATTTGGTTTCAAGCTTGGTGGGAGCAGGCGATACGGAGGGCATTT
GAGGTCGTGCATGGGATgtgcgggaaaaggagggcgagaccAGGACCGGA
GGGGATTGATAGGGGAAAGTAGGAAGAGCATGTTTCGGTCTGCTGGACAG
AATTTGCAAATTAATTGTgaagaggtggggggaagcagTCTATACATTAG
GACAAGAGATGCATGGGGACCAGTGGTACCGATCGTGCCTTTCATGTGAG
ATTGAAATCCGTTGGAGGGATGAGCGGCACGTacgggaaaaggagccaCG
GCAGATAAGGTGTGGGGACGGAATTGATTTTTGTTGCTGTCTCGTTCTAT
ACATACTTGGAATGGAAAATGTCGGACTTGGAAGTGGGATCGACAAAACC
CCTCAGCAAAAGAAAACCGAGATGGCGATGAGTGAGAGGATGCGAAATCA
GCGCCTGATTCGTCTTCTACAGCCAAAACATTGGCAAAGGCAAAGAATCA
ATTTCTTTCATAAAACCAGGCCTTTAATTCGACTTACAGGTTGGTTGGTG
GGAATCTGTCGCGTCCAAAGGCACAAGTCGCAGGACGAGCCAACATTCCG
ACTTCTTCTGTAGGCTGCATCTCGACTAGAAAACTACGTCTCGATGCTTC
AGAATCACTCAAGTGGCAAAAATAATAGACAGCTTCAACT back to topCoding sequence (CDS) from alignment at CM002459.1:761920..764259+ >rna2601 ID=rna2601|Name=rna2601|organism=Nannochloropsis gaditana|type=CDS|length=3612bp|location=Sequence derived from alignment at CM002459.1:761920..764259+ (Nannochloropsis gaditana)
ATGGAAATCCATACCCATATGAATGGACACTCGAACGGGCATGCCAGTGG
AAATGGCATCCATCCCACAGAGAAGACGAGTTTGGTGCAACAAGCGCAGC
ACGCCTATCGTCTGAACGACGTAGAGGCCTCGCGGCTCATCCATCAGCAG
AAATTTGAGGCAAAAACACATGATGAGACTCATGATTCTGTCGGAGATTA
CGTCAAGTCCATGATATTTGGGGGGTTGGATGGTATTCTCACGTCCTTCG
CCATTGTTGCGGGAGCCGCAGGGGGAGGATTGCCTGTGGAGGTTGTGATG
GTTTTGGGCTTCAGCAACATTTTTGCTGATGCATTTAGCATGGGCATGGG
GGAATATTTGAGCTCGAAGGCACACAATGAGTTTGTcttcaaggaaaagg
aacggGAAAGCTGGGAGCTGCAAAACTTCAGGGAAGGCGAGATCAAAGAG
ATGATTGACATCTATGTGGAGAGAGGCATGGAACCGGACGATGCTGAGGA
TGTGGTTCGAAAGATGTCAAAATACGACGACTTCTTCGTGAACgtgatga
tggtggaggagctcgggCTTCAGGTTCCCGACCCGAACGACGACATcgtc
aaggagggggtggtcaTGTTTCTGTCATTTGCCGGCTTTGGGGCCATGCC
TCTTCTAGGCTACGCATTGATACCTCTATGCTTTCCGTCTTTGGGCCCCT
CGCATTTATTCAATATCGCCTGTGGGGTTACTGCTCTGACCCTTTTTATC
ATGGGCGCCGTCAAGAGCAAGTTTTCCACGCGGGGTTGGCTGCATTCGGG
CTTGGAGATGCTCGTGTTGGGGGGTATATGTGCGGTCATGGCGTACGAGA
TCGGGCATTTGGTTTCAAGCTTGGTGGGAGCAGGCGATACGGAGGGCATT
TGAATGGAAATCCATACCCATATGAATGGACACTCGAACGGGCATGCCAG
TGGAAATGGCATCCATCCCACAGAGAAGACGAGTTTGGTGCAACAAGCGC
AGCACGCCTATCGTCTGAACGACGTAGAGGCCTCGCGGCTCATCCATCAG
CAGAAATTTGAGGCAAAAACACATGATGAGACTCATGATTCTGTCGGAGA
TTACGTCAAGTCCATGATATTTGGGGGGTTGGATGGTATTCTCACGTCCT
TCGCCATTGTTGCGGGAGCCGCAGGGGGAGGATTGCCTGTGGAGGTTGTG
ATGGTTTTGGGCTTCAGCAACATTTTTGCTGATGCATTTAGCATGGGCAT
GGGGGAATATTTGAGCTCGAAGGCACACAATGAGTTTGTcttcaaggaaa
aggaacggGAAAGCTGGGAGCTGCAAAACTTCAGGGAAGGCGAGATCAAA
GAGATGATTGACATCTATGTGGAGAGAGGCATGGAACCGGACGATGCTGA
GGATGTGGTTCGAAAGATGTCAAAATACGACGACTTCTTCGTGAACgtga
tgatggtggaggagctcgggCTTCAGGTTCCCGACCCGAACGACGACATc
gtcaaggagggggtggtcaTGTTTCTGTCATTTGCCGGCTTTGGGGCCAT
GCCTCTTCTAGGCTACGCATTGATACCTCTATGCTTTCCGTCTTTGGGCC
CCTCGCATTTATTCAATATCGCCTGTGGGGTTACTGCTCTGACCCTTTTT
ATCATGGGCGCCGTCAAGAGCAAGTTTTCCACGCGGGGTTGGCTGCATTC
GGGCTTGGAGATGCTCGTGTTGGGGGGTATATGTGCGGTCATGGCGTACG
AGATCGGGCATTTGGTTTCAAGCTTGGTGGGAGCAGGCGATACGGAGGGC
ATTTGAATGGAAATCCATACCCATATGAATGGACACTCGAACGGGCATGC
CAGTGGAAATGGCATCCATCCCACAGAGAAGACGAGTTTGGTGCAACAAG
CGCAGCACGCCTATCGTCTGAACGACGTAGAGGCCTCGCGGCTCATCCAT
CAGCAGAAATTTGAGGCAAAAACACATGATGAGACTCATGATTCTGTCGG
AGATTACGTCAAGTCCATGATATTTGGGGGGTTGGATGGTATTCTCACGT
CCTTCGCCATTGTTGCGGGAGCCGCAGGGGGAGGATTGCCTGTGGAGGTT
GTGATGGTTTTGGGCTTCAGCAACATTTTTGCTGATGCATTTAGCATGGG
CATGGGGGAATATTTGAGCTCGAAGGCACACAATGAGTTTGTcttcaagg
aaaaggaacggGAAAGCTGGGAGCTGCAAAACTTCAGGGAAGGCGAGATC
AAAGAGATGATTGACATCTATGTGGAGAGAGGCATGGAACCGGACGATGC
TGAGGATGTGGTTCGAAAGATGTCAAAATACGACGACTTCTTCGTGAACg
tgatgatggtggaggagctcgggCTTCAGGTTCCCGACCCGAACGACGAC
ATcgtcaaggagggggtggtcaTGTTTCTGTCATTTGCCGGCTTTGGGGC
CATGCCTCTTCTAGGCTACGCATTGATACCTCTATGCTTTCCGTCTTTGG
GCCCCTCGCATTTATTCAATATCGCCTGTGGGGTTACTGCTCTGACCCTT
TTTATCATGGGCGCCGTCAAGAGCAAGTTTTCCACGCGGGGTTGGCTGCA
TTCGGGCTTGGAGATGCTCGTGTTGGGGGGTATATGTGCGGTCATGGCGT
ACGAGATCGGGCATTTGGTTTCAAGCTTGGTGGGAGCAGGCGATACGGAG
GGCATTTGAATGGAAATCCATACCCATATGAATGGACACTCGAACGGGCA
TGCCAGTGGAAATGGCATCCATCCCACAGAGAAGACGAGTTTGGTGCAAC
AAGCGCAGCACGCCTATCGTCTGAACGACGTAGAGGCCTCGCGGCTCATC
CATCAGCAGAAATTTGAGGCAAAAACACATGATGAGACTCATGATTCTGT
CGGAGATTACGTCAAGTCCATGATATTTGGGGGGTTGGATGGTATTCTCA
CGTCCTTCGCCATTGTTGCGGGAGCCGCAGGGGGAGGATTGCCTGTGGAG
GTTGTGATGGTTTTGGGCTTCAGCAACATTTTTGCTGATGCATTTAGCAT
GGGCATGGGGGAATATTTGAGCTCGAAGGCACACAATGAGTTTGTcttca
aggaaaaggaacggGAAAGCTGGGAGCTGCAAAACTTCAGGGAAGGCGAG
ATCAAAGAGATGATTGACATCTATGTGGAGAGAGGCATGGAACCGGACGA
TGCTGAGGATGTGGTTCGAAAGATGTCAAAATACGACGACTTCTTCGTGA
ACgtgatgatggtggaggagctcgggCTTCAGGTTCCCGACCCGAACGAC
GACATcgtcaaggagggggtggtcaTGTTTCTGTCATTTGCCGGCTTTGG
GGCCATGCCTCTTCTAGGCTACGCATTGATACCTCTATGCTTTCCGTCTT
TGGGCCCCTCGCATTTATTCAATATCGCCTGTGGGGTTACTGCTCTGACC
CTTTTTATCATGGGCGCCGTCAAGAGCAAGTTTTCCACGCGGGGTTGGCT
GCATTCGGGCTTGGAGATGCTCGTGTTGGGGGGTATATGTGCGGTCATGG
CGTACGAGATCGGGCATTTGGTTTCAAGCTTGGTGGGAGCAGGCGATACG
GAGGGCATTTGA back to top
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