EWM28095.1, cds2593 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|585110438|gb|EWM28095.1| (vacuolar iron family transporter [Nannochloropsis gaditana]) HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query: 1 MEIHTHMNGHSNGHASGNGIHPTEKTSLVQQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGDTEGI 300
MEIHTHMNGHSNGHASGNGIHPTEKTSLVQQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGDTEGI
Sbjct: 1 MEIHTHMNGHSNGHASGNGIHPTEKTSLVQQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGDTEGI 300
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|299117071|emb|CBN73842.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 347.051 bits (889), Expect = 7.157e-117 Identity = 173/265 (65.28%), Postives = 205/265 (77.36%), Query Frame = 0
Query: 30 QQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPD-PNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293
+ ++A+ D +ASRL+H + + HDE H GDY+K+M+FGGLDGILTSFAIVAGAAGG LPV VV+VLGFSNIFADA SMG+GEYLSSKAHNE+V EK RE WEL+N REGEI EM++I+ ERGM DAEDV+ KM+KYDDFFVN+MM EELGLQVP +DD VKEG VMFLSFA FGAMPLLGY ++PL P P+ LF +AC VTA +LF MGA+KS+F TR W SG EML LGG CA +A+EIG V L+G
Sbjct: 24 KDVRNAFMTGDQQASRLLHDAR-AGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAAGGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLIG 287
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|223995613|ref|XP_002287480.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976596|gb|EED94923.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 305.834 bits (782), Expect = 9.213e-101 Identity = 157/272 (57.72%), Postives = 195/272 (71.69%), Query Frame = 0
Query: 24 EKTSLVQQ-AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDI--VKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292
E TSLV A+ AY D EAS+ H ++ + E H + G +K +IFGGLDGILT+FAIVAGAAGG +P+ V++VLGFSNIFADA +MG+GE+LSSKA NE++ E+ RE+WE++N+ EGEI EMIDIY ERGM DDA+ V+ M+KY +FFV+VMM EEL LQVPD + I +KEGVVMF +FA FG++PLLGY +IP FPSLG LF AC VT + LF MG VKS FS W GLE L+LGG CA +AY IG V L+
Sbjct: 6 ESTSLVPDGARKAYDGLDTEASKSFHDKRHNT-SGVEMHQTEGGMLKPLIFGGLDGILTAFAIVAGAAGGSMPIPVILVLGFSNIFADALAMGVGEFLSSKAENEWILSERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLI 276
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|397587409|gb|EJK53909.1| (hypothetical protein THAOC_26564 [Thalassiosira oceanica]) HSP 1 Score: 300.827 bits (769), Expect = 1.540e-98 Identity = 159/289 (55.02%), Postives = 196/289 (67.82%), Query Frame = 0
Query: 24 EKTSLVQQ-AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIK----------------EMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPN--DDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293
E TSLV A+ +Y D ASR H + + + E H G ++K +IFGGLDGILTSFAIVAGAAGG L V VV+VLGFSNI ADA +MG+GE+LSSKA NE++ E++RESWE++ + EGE + EMIDIY ERGM +DA V+R MSKY +FFV+VMM EEL LQ+P+ N + +KEGVVMF SFA FG++PLLGY +IP FP LG LF +C VTAL LF++G+VKS FS GW SGLEML LGG CA +AY IG V L+
Sbjct: 5 ESTSLVPNGARKSYVDRDGVASRKFHDTR-HGQENIEEHQEEGGFLKPLIFGGLDGILTSFAIVAGAAGGQLSVPVVLVLGFSNILADALAMGVGEFLSSKAENEWILSERKRESWEMETYPEGECRRRKCTTPENSYPSQHNEMIDIYTERGMSKEDATSVIRIMSKYKEFFVDVMMAEELALQIPEENHVTESMKEGVVMFFSFATFGSLPLLGYVIIPAMFPELGSDILFASSCVVTALVLFLLGSVKSFFSASGWFVSGLEMLFLGGCCATLAYTIGQFVEGLIA 292
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|1072236015|gb|OEU20743.1| (vacuolar Fe2+/Mn2+ uptake transporter-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 294.278 bits (752), Expect = 2.312e-96 Identity = 157/269 (58.36%), Postives = 200/269 (74.35%), Query Frame = 0
Query: 32 AQHAYRLNDVEASRLIHQQKF------EAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPN--DDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292
A+ AY + +ASR H+ K E + H S G ++ +IFGGLDGILTSFAIVAGAAGGG+PV V+VLGFSNIFADA SMG+GE+LSSKA+NE++ E+ERE WE+QNFREGEI+EMIDIYV +G+ +DA V++ M+KY+DFFV++MM +EL LQVP+ N + +KEG VMF SFA FGAMPLLGY +IPL FP L P++LF AC VTAL LF++G++KS FS W SGLE L+LGG CA +A+ IG V+ L+
Sbjct: 1 ARLAYESGNTDASRRYHETKTAVADGPEHTDEEPWHQSSGGLLQPVIFGGLDGILTSFAIVAGAAGGGIPVSAVLVLGFSNIFADALSMGVGEFLSSKANNEWILSEREREEWEMQNFREGEIQEMIDIYVNKGLTLEDATIVIKTMAKYEDFFVDIMMQQELELQVPESNHVEQSMKEGFVMFCSFAFFGAMPLLGYVIIPLLFPDLEPTYLFKSACVVTALVLFLLGSIKSNFSRSNWFLSGLETLLLGGTCATVAFVIGSFVNGLL 269
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|219114993|ref|XP_002178292.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410027|gb|EEC49957.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 286.189 bits (731), Expect = 4.036e-93 Identity = 148/276 (53.62%), Postives = 194/276 (70.29%), Query Frame = 0
Query: 22 PTEKTSLV--QQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPN--DDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293
P+E T LV A+ A++ D + SR H K ++ H + G +K +IFGGLDGILTSFAIVAGAAGG L +VV++LG SNIFADA SMG+GE+LSSKA+NE++ E+ RE WEL+N+ EGEIKEM++I+ ++GM +DA + M+KY DFFV++MM +EL LQVPD + + +KEGVVMF SFA FGA+PLLGY L PL F + LF AC VT + LF MG+VKS FS + W +G+E L+LGG CA +A+ IG LV S+ G
Sbjct: 2 PSEDTPLVAGSAARDAFQSADAKKSRQYHDAK---SASEDGHQTEGGMLKPIIFGGLDGILTSFAIVAGAAGGELSPQVVLILGVSNIFADALSMGVGEFLSSKANNEWILSERAREEWELENYPEGEIKEMVEIFEDKGMSHEDAVSCINTMAKYKDFFVDIMMQQELELQVPDKDHIRESMKEGVVMFCSFAFFGALPLLGYVLFPLEFHDMSEGELFVSACIVTGMVLFFMGSVKSFFSNQQWFIAGMETLLLGGACATVAFTIGQLVKSVYG 274
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|676384599|ref|XP_009035578.1| (hypothetical protein AURANDRAFT_24305 [Aureococcus anophagefferens] >gi|323453643|gb|EGB09514.1| hypothetical protein AURANDRAFT_24305 [Aureococcus anophagefferens]) HSP 1 Score: 268.085 bits (684), Expect = 6.564e-86 Identity = 140/274 (51.09%), Postives = 182/274 (66.42%), Query Frame = 0
Query: 22 PTEKTSLVQQA-QHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPND--DIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292
P+E+T + ++A AY DVE S H ++ + THDE H +VG +K+++FGGLDGILT FAIV+ AG + VV++LG NI ADA +MG+GEYLS+K+ +EF E+ RE WE+++ EGEI EM+DIYV RGM +DA V+ M+KY DFFVNVMMVEELGL VP+P D +K+G +MFL+F FGA PLLGYAL+P P P LF AC VT +TLF +GAVK+KF G E L LG +CA AY G L+ +
Sbjct: 4 PSERTHVDRKAATAAYSALDVELSSKAHAER-ASGTHDEQHSAVGGRLKTIVFGGLDGILTCFAIVSSCAGSDMSPRVVLLLGACNILADALAMGVGEYLSTKSSDEFASYERTREDWEMRHNPEGEILEMVDIYVGRGMSREDATTVITTMAKYHDFFVNVMMVEELGLTVPEPEAHCDAMKDGFLMFLAFCVFGAFPLLGYALLPQFRPDAAPHELFLAACAVTGVTLFGLGAVKAKFVNGNPYKLGAETLALGALCASSAYSAGALLQQFL 276
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|1210529413|dbj|GAX12047.1| (hypothetical protein FisN_8Lh147 [Fistulifera solaris]) HSP 1 Score: 258.455 bits (659), Expect = 3.092e-82 Identity = 150/278 (53.96%), Postives = 194/278 (69.78%), Query Frame = 0
Query: 21 HPTEKTSLVQQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPN--DDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGD 296
H E+T L A+ A++ + ASR H+ + A +E H G +K +IFGGLDGILTSFAIVAGAAGG L VV++LGFSNIFADA SMG+GE+LSSKA NE++ E+ RE WE +N+ EGEI+EMI+IY RGM +DA+ V+ M+KY DFFV+VMM +EL LQ P+ N + ++EGVVMF SFA FGAMPLLGY +IP FP L +LF AC +T + LF+MG+VKS FST+ W +G+E L LGG CA +A+ IG + + G D
Sbjct: 3 HDNERTPLT--ARTAFQDKNAAASRQYHESRSSAVKSEEAHQQGGGMLKPIIFGGLDGILTSFAIVAGAAGGRLDPSVVLILGFSNIFADALSMGVGEFLSSKAENEWILSERRREEWEFENYPEGEIEEMIEIYESRGMSHEDAKLVINTMAKYKDFFVDVMMTQELELQPPEENYLQENLREGVVMFSSFATFGAMPLLGYVIIPSAFPDLSTDYLFACACLITGMVLFLMGSVKSFFSTQHWFRAGMETLSLGGACATVAFTIGQALQAHFGVSD 278
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|1210522167|dbj|GAX18929.1| (hypothetical protein FisN_8Hh147 [Fistulifera solaris]) HSP 1 Score: 257.299 bits (656), Expect = 1.045e-81 Identity = 149/275 (54.18%), Postives = 193/275 (70.18%), Query Frame = 0
Query: 24 EKTSLVQQAQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPN--DDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVGAGD 296
E+T L A+ A++ + ASR H+ + A +E H G +K +IFGGLDGILTSFAIVAGAAGG L VV++LGFSNIFADA SMG+GE+LSSKA NE++ E+ RE WE +N+ EGEI+EMI+IY RGM +DA+ V+ M+KY DFFV+VMM +EL LQ P+ N + +EGVVMF SFA FGAMPLLGY +IP FP L +LF AC +T + LF+MG+VKS FST+ W +G+E L LGG CA +A+ IG ++ + G D
Sbjct: 7 ERTPLT--ARTAFQDKNAAASRQYHESRSSAVKSEEAHQQGGGMLKPIIFGGLDGILTSFAIVAGAAGGRLDPSVVLILGFSNIFADALSMGVGEFLSSKAENEWILSERRREEWEFENYPEGEIEEMIEIYESRGMSHEDAKLVINTMAKYKDFFVDVMMTQELELQPPEENYLQENFREGVVMFSSFAAFGAMPLLGYVIIPAAFPDLSTDYLFACACLITGMVLFLMGSVKSFFSTQHWFRAGMETLSLGGACATVAFTIGQVLQAHFGVSD 279
BLAST of EWM28095.1 vs. NCBI_GenBank
Match: gi|922862631|gb|KOO30199.1| (vacuolar iron family transporter [Chrysochromulina sp. CCMP291]) HSP 1 Score: 245.743 bits (626), Expect = 1.688e-77 Identity = 119/237 (50.21%), Postives = 169/237 (71.31%), Query Frame = 0
Query: 59 ETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGGLPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDDI--VKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293
E H+ G +K++IFGGLDGILTSFAI+AGA G L ++ LG SN+ ADA SMG GE+LSS+++N +V KE+ERE WEL+N EGEI EM+ ++V RGM DAE V+ +M+KY++FFV++MM EEL L VP D + +K+G+ MFL+FA FG +PL Y L + PSL + LF++AC TA++LF +GA K++F + +L++G+E ++LGG CA ++Y +G VS G
Sbjct: 8 EEHEESGGRLKAIIFGGLDGILTSFAIIAGAHGANLGPVPMLALGISNVLADALSMGAGEFLSSRSYNSYVLKEREREMWELKNHPEGEIAEMVQLFVARGMSRVDAEVVIERMAKYEEFFVDIMMKEELSLPVPSEEDTLESLKDGIAMFLAFALFGMLPLACYILAGMLAPSLDVTSLFSVACVATAISLFALGAFKARFHDKRYLYAGVETVLLGGACAAVSYFVGRAVSQFAG 244 The following BLAST results are available for this feature:
BLAST of EWM28095.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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