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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100120g7.6945.mrna |
| Orig protein id | gnl|cribi|Naga_100120g7.6945 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:754313..756848 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2597 ID=rna2597|Name=rna2597|organism=Nannochloropsis gaditana|type=mRNA|length=1552bp
GAACAACTTGGTGAAGCTCCTGAATGCAAGACAGCCGTGTCATCCCATGG
ATGTGCATTATTTTTACAAATTATTAGGGCGAAGACTTTGTCGTGGCGAT
AATGCTTAGGCAGACGGAAGAATCAGGGCCTCCTCTTGCGGGTACTGCGA
TCTGACCCCGGCACACCACTCAACTACGATGACCTCATTTCCACCATGGC
CGTCATCTAAATTGATCCACAGATGAAATCCTTCGCGTCGCGGAGACTTC
TTCGCCACGCCTCGGCCTTGTTAGTCTCATCACTACCACAAACCGCTGCC
AGAGGGGCTTTAATTGCGGGGGGTGTGCTCAAAAGGCAGCACATCCGGCC
ACATCGACATCAATTCCTTCCGGCACCTCATTTTTTTTCGTCTTCAGCCG
GCCAGTCTGATAGCAAGATTAGTTTTCAAGCCCTCGTACAGGATCTCGGG
AAAGCAGCTGCGGCTTCGGACGCTGAAAAGGCCATCGCAGCTTTGAGCAA
ATTTCCTCATATGCCTCCCGAACCGACATTACTTGTCTACAACGTCGCTA
TCGGCACATGTGTCCGGGCCGGCCAGATGGGAAAAGCCATGGGGTTACTG
AACCAATTGTTTGAGAGTCGAAAAGAGCATGTGCTACCCAACAGTCTCAC
CTACAATCTCTTGTTGTTGGGCGCTGCGCGAGCGGGCGACTGGCCTCAGG
CCCAAGGCTTTCATGAAGAGATGCTCCGGCACAGGGTGCGGCCGAACGCA
GACACGTACCAGAACTTGCTGGTTGCGTGTGGTAAAGGCAAAGACAAGAA
AATGGTGGGCGACCTCTTGAGTCAGGTAATTGGGCCAAAGCCCTCACACG
TCTACACGACAGCCATCGCAGCCTCCGCCCGTTGTGGAGATTGGGAGGGC
GCACTCGCCCTGCTCCGACAGCTCCGAGAGGAGAGCGGCCGCACACCTGA
GCCCGAGGCTTTCCATGCCGCCATGTTCGCCTGCACCAAGCCCGAGCCGG
CGCGATGGATGGAGTGTCTCGACCTATTAGGGGAGATGCGGAGCGCGGGG
CTCCCAGTGGGACTGACCGCTTACAACACAGCCATCTTGTGTGCAGGCCT
CGCGCACGAGCCCGCGGTCGCCCAGCGACTTTTGGACGAGCTGAAGGCTG
GGAAGGCGGGGAACGTGGCGCCCAACAATGGGAGCTACCGCGGGGTCGTG
AAGGGCCTGGCCAAGTCCGGAGACCACGAGAAATGCCTAAACCTCTTGGA
GGAGATGGCGCAGGCGAAGCTGGAACCGGACTTGCTCATATTCACGGACG
CCATGGAGGTGTTCGCGCGCTCGCAGAACCCGGGGGCCACTCTGCGGGTC
TTGCATCAGATGAAAGCCGCCAAACAGCCCGACCTCCGCCTGTACCTGGG
GCCCTTGATTGACGCCGACGAGGCGTCGGAGCGGCCGGTGCTTTCTGCCT
TCGTGCAGGAGGTGGAAAAGTTGGGCGCCTTGCATGTTGCGGAGGGCGAG
GGGCAAAAGGAGGCTGCGCAGAAATGAAACAAAGCATACATGGGCCGGGA
CA back to topprotein sequence of rna2597 >rna2597-protein ID=rna2597-protein|Name=rna2597|organism=Nannochloropsis gaditana|type=polypeptide|length=353bp
MEGVSITPSNGAIPATVAPAQAATENEAAPKDPSQAPPAEKTIVQSSGVI
ESDEDDVPLSALAKNGKPESDGGGALAPSLPACQPPASATPVASTTGASV
PAQYENDDDMPISKLMRYPNLVFAHAKKRKEGQSKQIEGNGSGGQGEEKS
KKVKQEPPGEEEDASRSQEGGAKKKKKRKDGDGDSGGAMSGNGKSKVTRN
SAANKSAAHGQRTQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPD
YETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLL
KALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIRRGWAV
TDA back to topmRNA from alignment at CM002459.1:754313..756848- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2597 ID=rna2597|Name=rna2597|organism=Nannochloropsis gaditana|type=mRNA|length=2536bp|location=Sequence derived from alignment at CM002459.1:754313..756848- (Nannochloropsis gaditana)
CGGACTAATGCTCTATGACGGCAGGAATACCGTCGTACGTATCATTTGAT
GTAGGCAGAAAGCCAACAGAGGGAGGAGGTCCCTCGGGTGCTCATTTCCT
TCTCCTTTCGATGGCATGTCCCTCAGGCTTTATTAGGGCGACAACGTGCG
TCCACGTCTATCCCAGCATCGCTTTCAAGCTGCTAAAGAAAGATTGAAAA
ACAAGAGTCTACGAGAACGATGGAAGGCGTTTCAATTACTCCCAGGTGAG
TTGGGGCTTTGTCTTCACCACGGTTGCTTGTGTGCTACGACACGCGCTAG
GCGCCTCGAGACGAAGTCACGGTTTCGCTCGAGTTTCTGCACGGTGTACG
TATCTGATGGCATAATTTTTACATGAAATGACAGCAACGGGGCCATACCC
GCAACTGTTGCGCCCGCTCAAGCCGCCACTGAAAACGAGGCTGCACCGAA
AGACCCCTCTCAAGCCCCCCCTGCCGAGAAAACCATAGTGCAAAGCTCCG
GTGTGATCGAAAGTGACGAGGACGATGTACCGCTATCGGCACTTGCCAAA
AATGGGAAACCCGAAAGCGACGGAGGTGGTGCTCTCGCCCCCTCTCTTCC
GGCCTGCCAGCCTCCCGCCAGTGCCACGCCCGTCGCGAGTACGACCGGAG
CCTCGGTGCCCGCGCAATACGAGAACGACGACGACATGCCCATCTCGAAG
CTCATGCGATACCCTAACCTGGTATTTGCCCATGCAAAGAAGCGGAAGGA
AGGGCAAAGCAAGCAAATCGAGGGCAATGGCAGCGGAGGCCAGGGCGAGG
AGAAGAGCAAGAAGGTCAAGCAAGAGCCTCCCGGGGAGGAAGAAGACGCG
TCGCGGAGCCAGGAGGGTGGCGCAAAGAAGAAGAAGAAGAGGAAAGATGG
AGATGGAGACTCAGGAGGGGCCATGTCGGGGAACGGAAAGAGCAAAGTGA
CGAGGAACAGCGCGGCCAACAAGTCTGCAGCGCACGGCCAGCGGACCCAG
GACTTCTACATGCTGGATAAGGGCGAATTGGTGCAGAAACTCTTGCGGCG
GTGGTGGTACGCCATCCAGTGGCCTGACTCGAGCTGTGCGACTCAGGTGA
GGAGATGCAGGAATTGACGGGCCTGTTCCTACTCGAGCCTGACCTCCAAG
ACGCAGACATGTGCCGGCGTTGCTTGGCGCTCCCTTTTCCACGCCTCTCT
CAAGCCTCCTCTCTCCCTCCACCCCACAGCCGCCCCCAGATTACGAGACG
CTGGAGGGATACCCAGGCGTCTTCGTCTGCGTGCGCGGACCTGCCATAGG
CCACGTTCTCGACAAGCGGAACCATGCCGAGTGTCCCAATTTCACAAATT
TTGCACGAAAACCTGCCGCGGAGTTGAAAGACCTGTTGTTGAAGGCCTTG
GCAGAGCAACGCCGGCAGTTACAAGAGCATGAGGGGGGAAATCGTAAGCT
TGAAAAGAAGATCGAGAAGGAGAGGAGGTGGGTAGAGAGGTTGGACGCGG
CAAACGTGGATAAGGAGGCGATAAGAAGAGGCTGGGCAGTAACTGACGCG
TGATCGAAATGAGGGGGCGGGAGGTGCGGGGAGGTTGACAAGGATTCTAG
GTGCCAGGAGTGAGGCGAGGCAAGGGGAGAGGGTGGTAGGAGAGGGGAGC
CGGCGGGACGCCGAAAAAGCTTGAGGAGAGATGCAAGGGGAGGAAGGGAT
CACAGGTGTCGCTAGAAGTACCTCGTATCGAGGTTTAGCACGAGCAGCTT
TCACGTTCCATCGGCTTTCGAGGTAATGGTAAGCGATTGTCACCTCGGAC
GCGGACACGGCGACAGTCCCCAAAGCCCGTGGCAAGTGCCCTGGCCTCGG
GGAAGGCAAAATCAAATAGACATAGGGGCATATAGAGAAAAGGAAAGAAA
CTGACGGGAAGACGCCGGCACTCCCCCCGACCGCCGGTGCTGGCTTGTCG
GCTAAGCACAAGACGTAGAGCCTAGCCTGCTAGTCCCTGTCCCGGCCCAT
GTATGCTTTGTTTCATTTCTGCGCAGCCTCCTTTTGCCCCTCGCCCTCCG
CAACATGCAAGGCGCCCAACTTTTCCACCTCCTGCACGAAGGCAGAAAGC
ACCGGCCGCTCCGACGCCTCGTCGGCGTCAATCAAGGGCCCCAGGTACAG
GCGGAGGTCGGGCTGTTTGGCGGCTTTCATCTGATGCAAGACCCGCAGAG
TGGCCCCCGGGTTCTGCGAGCGCGCGAACACCTCCATGGCGTCCGTGAAT
ATGAGCAAGTCCGGTTCCAGCTTCGCCTGCGCCATCTCCTCCAAGAGGTT
TAGGCATTTCTCGTGGTCTCCGGACTTGGCCAGGCCCTTCACGACCCCGC
GGTAGCTCCCATTGTTGGGCGCCACGTTCCCCGCCTTCCCAGCCTTCAGC
TCGTCCAAAAGTCGCTGGGCGACCGCGGGCTCGTGCGCGAGGCCTGCACA
CAAGATGGCTGTGTTGTAAGCGGTCAGTCCCACTGGGAGCCCCGCGCTCC
GCATCTCCCCTAATAGGTCGAGACACTCCATCCATC back to topCoding sequence (CDS) from alignment at CM002459.1:754313..756848- >rna2597 ID=rna2597|Name=rna2597|organism=Nannochloropsis gaditana|type=CDS|length=3186bp|location=Sequence derived from alignment at CM002459.1:754313..756848- (Nannochloropsis gaditana)
CCGCCCCCAGATTACGAGACGCTGGAGGGATACCCAGGCGTCTTCGTCTG
CGTGCGCGGACCTGCCATAGGCCACGTTCTCGACAAGCGGAACCATGCCG
AGTGTCCCAATTTCACAAATTTTGCACGAAAACCTGCCGCGGAGTTGAAA
GACCTGTTGTTGAAGGCCTTGGCAGAGCAACGCCGGCAGTTACAAGAGCA
TGAGGGGGGAAATCGTAAGCTTGAAAAGAAGATCGAGAAGGAGAGGAGGT
GGGTAGAGAGGTTGGACGCGGCAAACGTGGATAAGGAGGCGATAAGAAGA
GGCTGGGCAGTAACTGACGCGTGACAACGGGGCCATACCCGCAACTGTTG
CGCCCGCTCAAGCCGCCACTGAAAACGAGGCTGCACCGAAAGACCCCTCT
CAAGCCCCCCCTGCCGAGAAAACCATAGTGCAAAGCTCCGGTGTGATCGA
AAGTGACGAGGACGATGTACCGCTATCGGCACTTGCCAAAAATGGGAAAC
CCGAAAGCGACGGAGGTGGTGCTCTCGCCCCCTCTCTTCCGGCCTGCCAG
CCTCCCGCCAGTGCCACGCCCGTCGCGAGTACGACCGGAGCCTCGGTGCC
CGCGCAATACGAGAACGACGACGACATGCCCATCTCGAAGCTCATGCGAT
ACCCTAACCTGGTATTTGCCCATGCAAAGAAGCGGAAGGAAGGGCAAAGC
AAGCAAATCGAGGGCAATGGCAGCGGAGGCCAGGGCGAGGAGAAGAGCAA
GAAGGTCAAGCAAGAGCCTCCCGGGGAGGAAGAAGACGCGTCGCGGAGCC
AGGAGGGTGGCGCAAAGAAGAAGAAGAAGAGGAAAGATGGAGATGGAGAC
TCAGGAGGGGCCATGTCGGGGAACGGAAAGAGCAAAGTGACGAGGAACAG
CGCGGCCAACAAGTCTGCAGCGCACGGCCAGCGGACCCAGGACTTCTACA
TGCTGGATAAGGGCGAATTGGTGCAGAAACTCTTGCGGCGGTGGTGGTAC
GCCATCCAGTGGCCTGACTCGAGCTGTGCGACTCAGATGGAAGGCGTTTC
AATTACTCCCAGCCGCCCCCAGATTACGAGACGCTGGAGGGATACCCAGG
CGTCTTCGTCTGCGTGCGCGGACCTGCCATAGGCCACGTTCTCGACAAGC
GGAACCATGCCGAGTGTCCCAATTTCACAAATTTTGCACGAAAACCTGCC
GCGGAGTTGAAAGACCTGTTGTTGAAGGCCTTGGCAGAGCAACGCCGGCA
GTTACAAGAGCATGAGGGGGGAAATCGTAAGCTTGAAAAGAAGATCGAGA
AGGAGAGGAGGTGGGTAGAGAGGTTGGACGCGGCAAACGTGGATAAGGAG
GCGATAAGAAGAGGCTGGGCAGTAACTGACGCGTGACAACGGGGCCATAC
CCGCAACTGTTGCGCCCGCTCAAGCCGCCACTGAAAACGAGGCTGCACCG
AAAGACCCCTCTCAAGCCCCCCCTGCCGAGAAAACCATAGTGCAAAGCTC
CGGTGTGATCGAAAGTGACGAGGACGATGTACCGCTATCGGCACTTGCCA
AAAATGGGAAACCCGAAAGCGACGGAGGTGGTGCTCTCGCCCCCTCTCTT
CCGGCCTGCCAGCCTCCCGCCAGTGCCACGCCCGTCGCGAGTACGACCGG
AGCCTCGGTGCCCGCGCAATACGAGAACGACGACGACATGCCCATCTCGA
AGCTCATGCGATACCCTAACCTGGTATTTGCCCATGCAAAGAAGCGGAAG
GAAGGGCAAAGCAAGCAAATCGAGGGCAATGGCAGCGGAGGCCAGGGCGA
GGAGAAGAGCAAGAAGGTCAAGCAAGAGCCTCCCGGGGAGGAAGAAGACG
CGTCGCGGAGCCAGGAGGGTGGCGCAAAGAAGAAGAAGAAGAGGAAAGAT
GGAGATGGAGACTCAGGAGGGGCCATGTCGGGGAACGGAAAGAGCAAAGT
GACGAGGAACAGCGCGGCCAACAAGTCTGCAGCGCACGGCCAGCGGACCC
AGGACTTCTACATGCTGGATAAGGGCGAATTGGTGCAGAAACTCTTGCGG
CGGTGGTGGTACGCCATCCAGTGGCCTGACTCGAGCTGTGCGACTCAGAT
GGAAGGCGTTTCAATTACTCCCAGCCGCCCCCAGATTACGAGACGCTGGA
GGGATACCCAGGCGTCTTCGTCTGCGTGCGCGGACCTGCCATAGGCCACG
TTCTCGACAAGCGGAACCATGCCGAGTGTCCCAATTTCACAAATTTTGCA
CGAAAACCTGCCGCGGAGTTGAAAGACCTGTTGTTGAAGGCCTTGGCAGA
GCAACGCCGGCAGTTACAAGAGCATGAGGGGGGAAATCGTAAGCTTGAAA
AGAAGATCGAGAAGGAGAGGAGGTGGGTAGAGAGGTTGGACGCGGCAAAC
GTGGATAAGGAGGCGATAAGAAGAGGCTGGGCAGTAACTGACGCGTGACA
ACGGGGCCATACCCGCAACTGTTGCGCCCGCTCAAGCCGCCACTGAAAAC
GAGGCTGCACCGAAAGACCCCTCTCAAGCCCCCCCTGCCGAGAAAACCAT
AGTGCAAAGCTCCGGTGTGATCGAAAGTGACGAGGACGATGTACCGCTAT
CGGCACTTGCCAAAAATGGGAAACCCGAAAGCGACGGAGGTGGTGCTCTC
GCCCCCTCTCTTCCGGCCTGCCAGCCTCCCGCCAGTGCCACGCCCGTCGC
GAGTACGACCGGAGCCTCGGTGCCCGCGCAATACGAGAACGACGACGACA
TGCCCATCTCGAAGCTCATGCGATACCCTAACCTGGTATTTGCCCATGCA
AAGAAGCGGAAGGAAGGGCAAAGCAAGCAAATCGAGGGCAATGGCAGCGG
AGGCCAGGGCGAGGAGAAGAGCAAGAAGGTCAAGCAAGAGCCTCCCGGGG
AGGAAGAAGACGCGTCGCGGAGCCAGGAGGGTGGCGCAAAGAAGAAGAAG
AAGAGGAAAGATGGAGATGGAGACTCAGGAGGGGCCATGTCGGGGAACGG
AAAGAGCAAAGTGACGAGGAACAGCGCGGCCAACAAGTCTGCAGCGCACG
GCCAGCGGACCCAGGACTTCTACATGCTGGATAAGGGCGAATTGGTGCAG
AAACTCTTGCGGCGGTGGTGGTACGCCATCCAGTGGCCTGACTCGAGCTG
TGCGACTCAGATGGAAGGCGTTTCAATTACTCCCAG back to top
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