EWM28084.1, cds2589 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|585110427|gb|EWM28084.1| (hypothetical protein Naga_100120g7 [Nannochloropsis gaditana]) HSP 1 Score: 722.62 bits (1864), Expect = 0.000e+0 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MEGVSITPSNGAIPATVAPAQAATENEAAPKDPSQAPPAEKTIVQSSGVIESDEDDVPLSALAKNGKPESDGGGALAPSLPACQPPASATPVASTTGASVPAQYENDDDMPISKLMRYPNLVFAHAKKRKEGQSKQIEGNGSGGQGEEKSKKVKQEPPGEEEDASRSQEGGAKKKKKRKDGDGDSGGAMSGNGKSKVTRNSAANKSAAHGQRTQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIRRGWAVTDA 353
MEGVSITPSNGAIPATVAPAQAATENEAAPKDPSQAPPAEKTIVQSSGVIESDEDDVPLSALAKNGKPESDGGGALAPSLPACQPPASATPVASTTGASVPAQYENDDDMPISKLMRYPNLVFAHAKKRKEGQSKQIEGNGSGGQGEEKSKKVKQEPPGEEEDASRSQEGGAKKKKKRKDGDGDSGGAMSGNGKSKVTRNSAANKSAAHGQRTQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIRRGWAVTDA
Sbjct: 1 MEGVSITPSNGAIPATVAPAQAATENEAAPKDPSQAPPAEKTIVQSSGVIESDEDDVPLSALAKNGKPESDGGGALAPSLPACQPPASATPVASTTGASVPAQYENDDDMPISKLMRYPNLVFAHAKKRKEGQSKQIEGNGSGGQGEEKSKKVKQEPPGEEEDASRSQEGGAKKKKKRKDGDGDSGGAMSGNGKSKVTRNSAANKSAAHGQRTQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIRRGWAVTDA 353
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|298708183|emb|CBJ30523.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 143.28 bits (360), Expect = 4.095e-37 Identity = 67/134 (50.00%), Postives = 83/134 (61.94%), Query Frame = 0
Query: 212 RTQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIR 345
R+ Y KGE++QKLL RWWYA++WP PP YE LEGYPGVF+CV G IG +LD RN CP FTNFA K + ELK LL AL Q+ L H G N E I++E +W++ +D A DK A+R
Sbjct: 114 RSGVLYDTKKGEMIQKLLCRWWYALEWPAKKDLRPAPPSYEALEGYPGVFICVEGDDIGKLLDVRNKETCPCFTNFANKSSEELKGLLETALTTQKEALIAHWGKNVAEEANIDRELKWLKSVDPAKADKAAVR 247
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|1072228500|gb|OEU13235.1| (hypothetical protein FRACYDRAFT_275984 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 138.272 bits (347), Expect = 1.117e-34 Identity = 57/124 (45.97%), Postives = 84/124 (67.74%), Query Frame = 0
Query: 221 KGELVQKLLRRWWYAIQWPDSSCATQPPP-DYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEA 343
KG+L+QKLL RWWYAI WPD SC + PP +Y+T++G+PGV++C G +G + D R+ + P+F NFA+ + EL+DLL+KA+ EQ+ QL E EG EK++ +W +L+ DK+A
Sbjct: 155 KGQLIQKLLCRWWYAISWPDPSCIPKTPPKNYDTMDGFPGVYICTHGDEVGTIKDFRDKSTAPHFNNFAKMTSEELRDLLIKAINEQKTQLSESEGTGTSTEKELNSMLKWATKLNVKKADKDA 278
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|219127650|ref|XP_002184044.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404275|gb|EEC44222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 129.413 bits (324), Expect = 1.365e-31 Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 220 DKGELVQKLLRRWWYAIQWPD-SSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIR 345
DKG L+Q+LL RWWYA+ WPD ++ +PP ++ L+G+ GV+VC G +G + D R+ CP+F F RK A EL+ LLLKAL EQR QL EG EK+I++ +W ++++ DK+A++
Sbjct: 141 DKGLLIQRLLCRWWYAMTWPDPATLPVRPPKRFDALDGFTGVYVCTEGDKVGQIRDLRDKTTCPSFQIFVRKDAEELRQLLLKALEEQRAQLVAKEGSGTPTEKEIDQLVKWAKKVNTTKADKDAVK 267
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|219130037|ref|XP_002185181.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403360|gb|EEC43313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 129.413 bits (324), Expect = 1.416e-31 Identity = 56/127 (44.09%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 220 DKGELVQKLLRRWWYAIQWPD-SSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIR 345
DKG L+Q+LL RWWYA+ WPD ++ +PP ++ L+G+ GV+VC G +G + D R+ CP+F F RK A EL+ LLLKAL EQR QL EG EK+I++ +W ++++ DK+A++
Sbjct: 139 DKGLLIQRLLCRWWYAMTWPDPATLPVRPPKRFDALDGFTGVYVCTEGDKVGQIRDLRDKTTCPSFQIFVRKDAEELRQLLLKALEEQRAQLVAKEGSGTPTEKEIDQLVKWAKKVNTTKADKDAVK 265
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|1210531938|dbj|GAX09366.1| (hypothetical protein FisN_6Lh263 [Fistulifera solaris]) HSP 1 Score: 120.553 bits (301), Expect = 1.909e-28 Identity = 55/124 (44.35%), Postives = 83/124 (66.94%), Query Frame = 0
Query: 221 KGELVQKLLRRWWYAIQWPD-SSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEA 343
KG L+Q+LL RWWYA+ WPD + +QPP Y++LEG+PGV+V G +G + D R+ P+F NFA+KPA EL+ LL +AL +Q+ +L + EG LEK+++ +W E+++ DK+A
Sbjct: 123 KGLLIQRLLCRWWYAMTWPDPAQLPSQPPAGYDSLEGFPGVYVRTSGEKVGTLKDVRDLQRAPSFLNFAKKPAEELQVLLKQALLKQKEELIQREGKGTALEKELDALLKWTEKVNPTKADKDA 246
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|223994313|ref|XP_002286840.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978155|gb|EED96481.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 118.627 bits (296), Expect = 1.528e-25 Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = 0
Query: 220 DKGELVQKLLRRWWYAIQWPDSSCA-TQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEA 343
DKG+L+Q +L RWWYA QWPD SC + P Y+ L+G+ GV++C G +G D R+ ++ P+F NFA+K + ELKD+LL A+ +QR+ L + EG E+++ +W +LD D+EA
Sbjct: 1041 DKGKLIQSILSRWWYAYQWPDPSCIPSSTPKGYDALDGFSGVYICTTGDNVGKFKDYRDLSKAPSFKNFAQKSSHELKDMLLLAIEKQRKALIKLEGEGTDREQELRGLEKWALKLDCGKADREA 1165
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|1210519018|dbj|GAX22016.1| (hypothetical protein FisN_6Hh263 [Fistulifera solaris]) HSP 1 Score: 107.457 bits (267), Expect = 1.219e-23 Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = 0
Query: 221 KGELVQKLLRRWWYAIQWPD-SSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEA 343
KG L+Q+LL RWWYA+ WPD + +PP Y++LEG+PGV+V G +G + D R+ + P+F NFA+KPA EL+ LL +AL +Q+ +L +HEG LEK+++ +W E+++ + DK+A
Sbjct: 112 KGLLIQRLLCRWWYAMTWPDPAQLPAKPPAGYDSLEGFPGVYVRTSGEKVGSLKDVRDLQKAPSFLNFAKKPAEELQALLKQALLKQKEELIQHEGKGTALEKELDALLKWTEKVNPSKADKDA 235
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|698801230|ref|XP_009833644.1| (hypothetical protein H257_09199 [Aphanomyces astaci] >gi|574111233|gb|ETV76729.1| hypothetical protein H257_09199 [Aphanomyces astaci]) HSP 1 Score: 107.071 bits (266), Expect = 3.678e-23 Identity = 52/143 (36.36%), Postives = 86/143 (60.14%), Query Frame = 0
Query: 205 KSAAHGQR--TQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIR 345
KS A+ Q+ ++ Y KG LVQ+LL RWWYA+ WP + PD + L+G+PG F+ V+G +G ++DKRN + P F F P+ E+++LL+ A A Q + L +HEG + L K + + + + ++A ++E+I+
Sbjct: 124 KSIAYKQQEASESLYDTLKGRLVQELLCRWWYALDWPSHDTKREETPDLQPLDGFPGSFISVKGDDMGSIVDKRNASGKPTFITFFAMPSKEVQNLLVVAYANQMKVLAKHEGPDAPLLKDLGQALKSAQSINADKAERESIK 266
BLAST of EWM28084.1 vs. NCBI_GenBank
Match: gi|698801224|ref|XP_009833641.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574111234|gb|ETV76730.1| hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 107.071 bits (266), Expect = 3.913e-23 Identity = 52/143 (36.36%), Postives = 86/143 (60.14%), Query Frame = 0
Query: 205 KSAAHGQR--TQDFYMLDKGELVQKLLRRWWYAIQWPDSSCATQPPPDYETLEGYPGVFVCVRGPAIGHVLDKRNHAECPNFTNFARKPAAELKDLLLKALAEQRRQLQEHEGGNRKLEKKIEKERRWVERLDAANVDKEAIR 345
KS A+ Q+ ++ Y KG LVQ+LL RWWYA+ WP + PD + L+G+PG F+ V+G +G ++DKRN + P F F P+ E+++LL+ A A Q + L +HEG + L K + + + + ++A ++E+I+
Sbjct: 123 KSIAYKQQEASESLYDTLKGRLVQELLCRWWYALDWPSHDTKREETPDLQPLDGFPGSFISVKGDDMGSIVDKRNASGKPTFITFFAMPSKEVQNLLVVAYANQMKVLAKHEGPDAPLLKDLGQALKSAQSINADKAERESIK 265 The following BLAST results are available for this feature:
BLAST of EWM28084.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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