rna2586, rna2586 (mRNA) Nannochloropsis gaditana

Overview
Namerna2586
Unique Namerna2586
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length673
Alignment locationCM002459.1:732318..733816 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100120g19.6949.mrna
Orig protein idgnl|cribi|Naga_100120g19.6949
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:732318..733816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100120g19gene2473Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2586rna2586-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28088.1cds2578Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2586 ID=rna2586|Name=rna2586|organism=Nannochloropsis gaditana|type=mRNA|length=673bp
GGACGGGTCGCTGCCTCAGATGGTGTGTGATACCGGGGAGAGCCTGTCAG
CGCAGACACGGGTTTGCATATGGTACGAATCGTCTAGAACTATGATTGTA
TGGAAGTGGTGCCTTTAGCAGGAGAAGGATTGCTGGTTTTGGAGCGACAA
TTCCTCCCCACCGTGAGGATACTTGCCCTCATGAAGTTTAGGCTTGAGGA
TGACGGCATTATGCATCATGGAGCTAACACTTTGCAGGTCCTAAAACCAT
TACCAAGCACAGGGTCATAGGTCGATTTCGAGACGTATTGACGTCGAGCA
TTAATTCGATATGTCTGCTGTACTCGTAAACCCCAAGCCCTTCTTGCAAG
GGCTAACCGGCAAACCTGTCTTCATTAAACTCAAGTGGGGCATGGAGTAC
AAAGGCATACTCCTCTCCGTCGATAACTACTACAACCTGCAACTGGCGGA
CACTGAGGAATGGATCGACGGGGCCATGGCAGGAAACCTGGGAGAGGTGC
TGATCAGGTGCAACAACGTTTTGTACGTCAGAGGAGCGCCGGAAGAGGAC
ATGGAGGCATAGTGATTGGCGGTGACGGTGATGAAGGGGAAGAGAGCGAT
GACGGGAGATTTCCGACGGCGTTTCACAAGGAAATAATTAAAAAAAGCAC
TTAACCTTGACATATTGGTTCTC
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protein sequence of rna2586

>rna2586-protein ID=rna2586-protein|Name=rna2586|organism=Nannochloropsis gaditana|type=polypeptide|length=191bp
MGSRRRHPAQQGSCAADEDEEVNPEILDEEEQATVIQDLRRKNEEQNRLT
RRVFLGLCFFLLLIFAYCAAVTFKAPFKLEHQLHLQSATTSAGFLATYSM
NAFAIVIASFVLAGRGNSQLLAITMCASVINLVAWSCIFWHFTPPPPLGL
WWLPTTPLFVVTVSLYIDWDLKRLNREIDALDRMQYRFKNV
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mRNA from alignment at CM002459.1:732318..733816-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2586 ID=rna2586|Name=rna2586|organism=Nannochloropsis gaditana|type=mRNA|length=1499bp|location=Sequence derived from alignment at CM002459.1:732318..733816- (Nannochloropsis gaditana)
GAATCCCGGCGAAAACCTCCGATGACAGATCCCGGCGAACGCCTCCGTTG
ACCACCGTGTGGCACCTAATGTATTTGTTCCAACTCAACAGAATGATTCG
CAGGGGAGTGACATCTTGAGTGCGCGCCGGATTCAATCTTATAACTGCAT
CGTACAGAATCAAGACAAAAAAGAGTCAATGGGCAGCAGGAGGCGACACC
CAGCACAGCAAGGTAGCTGTGCGGCGGACGAAGATGAGGAAGTGAACCCT
GAAATTTTAGACGAAGAGGAGCAGGCGACCGTTATTCAAGACCTTCGACG
AAAGAATGAGGAGCAAAACCGTCTCACACGGGTAAATTACAAAAGGAAAC
GAGGGGAACAGGTGTACTGGTCGTTTGCTTTTTCATATTTGTTGGACATC
GATCGGCTCACCCCATGTATGAGCCCTTACAAAGAGCACACGCAATGTCT
TCTGTGGTGCCGTTCCGCACAAGGCTTGCTCGCGCCACGTAGCTAACCCC
TTGTCTACTATTCCGTCGCACTCTGGCGCTCATTTAGCGAGTTTTCCTGG
GGCTATGTTTTTTCCTGCTCTTGATCTTCGCGTACTGCGCGGCTGTAACT
TTCAAGGCGCCCTTTAAATTGGAGCACCAGCTGCATCTCCAGTCGGCCAC
TACATCAGCAGGCTTTCTAGCCACGTACTCTATGAATGCTTTTGCTATCG
TGATAGCGAGTTTTGTGCTTGCGGTACGTGAATGCAAGCTCTAGCGGTAT
TGTAAACCATACTTTTGCATATTCGAGGTGTTAATTAGCAACCTAAATCC
TAGTAAATATTAACACTTACTCTTTTTCTTGGAAGTCGTTTTGGCCGAGC
AACAATTTTGGCATGGGATAATGACTGGAGTGCACGCTGTAGGCTGAATC
CACATGAGTGTTATCTAGGATTCGATGTTCTTGCTACCTTCAGTCTGACT
CATCATTTTCTTCCAGGGTCGTGGCAACTCGCAACTATTAGCCATTACAA
TGTGTGCCAGTGTCATCAACCTCGTGGCGTGGTCATGGTAAGCCCCTCCG
GCCGATCGGACACATGGCTGACAGACCGGACTTTCGTAGGGGTGGCGCAC
GTTTCCTGATGGGCGGGAGTGCTGTCGTTCGTGGTTGTCAGAAGAAAACA
CGCATATCGACGTGCAAATTAATTTGCCCTCTGTTCTCCTCACGGCGCTA
TCACAGCATTTTCTGGCACTTCACACCTCCTCCACCCCTGGGCCTTTGGT
GGCTGCCGACGACCCCCCTCTTCGTGGTCACGGTCTCGCTGTACATCGAT
TGGGACCTCAAGAGATTGAATCGGGAAATTGATGCCTTGGATCGGATGCA
ATATCGATTTAAGAATGTGTAGACTTCGTGAATGGGTGGTAGCGGGCTGC
AGGTTCCTTGGGCTAAGAATGACCAGCACTCGTGTACAGAAAGTGATTAA
AAGCTCTTGCAAAGATGAAAAAACTCAACCGCAACAAGCCACTGTCGCA
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Coding sequence (CDS) from alignment at CM002459.1:732318..733816-

>rna2586 ID=rna2586|Name=rna2586|organism=Nannochloropsis gaditana|type=CDS|length=2304bp|location=Sequence derived from alignment at CM002459.1:732318..733816- (Nannochloropsis gaditana)
CATTTTCTGGCACTTCACACCTCCTCCACCCCTGGGCCTTTGGTGGCTGC
CGACGACCCCCCTCTTCGTGGTCACGGTCTCGCTGTACATCGATTGGGAC
CTCAAGAGATTGAATCGGGAAATTGATGCCTTGGATCGGATGCAATATCG
ATTTAAGAATGTGTAGGGTCGTGGCAACTCGCAACTATTAGCCATTACAA
TGTGTGCCAGTGTCATCAACCTCGTGGCGTGGTCATGCGAGTTTTCCTGG
GGCTATGTTTTTTCCTGCTCTTGATCTTCGCGTACTGCGCGGCTGTAACT
TTCAAGGCGCCCTTTAAATTGGAGCACCAGCTGCATCTCCAGTCGGCCAC
TACATCAGCAGGCTTTCTAGCCACGTACTCTATGAATGCTTTTGCTATCG
TGATAGCGAGTTTTGTGCTTGCGATGGGCAGCAGGAGGCGACACCCAGCA
CAGCAAGGTAGCTGTGCGGCGGACGAAGATGAGGAAGTGAACCCTGAAAT
TTTAGACGAAGAGGAGCAGGCGACCGTTATTCAAGACCTTCGACGAAAGA
ATGAGGAGCAAAACCGTCTCACACGGCATTTTCTGGCACTTCACACCTCC
TCCACCCCTGGGCCTTTGGTGGCTGCCGACGACCCCCCTCTTCGTGGTCA
CGGTCTCGCTGTACATCGATTGGGACCTCAAGAGATTGAATCGGGAAATT
GATGCCTTGGATCGGATGCAATATCGATTTAAGAATGTGTAGGGTCGTGG
CAACTCGCAACTATTAGCCATTACAATGTGTGCCAGTGTCATCAACCTCG
TGGCGTGGTCATGCGAGTTTTCCTGGGGCTATGTTTTTTCCTGCTCTTGA
TCTTCGCGTACTGCGCGGCTGTAACTTTCAAGGCGCCCTTTAAATTGGAG
CACCAGCTGCATCTCCAGTCGGCCACTACATCAGCAGGCTTTCTAGCCAC
GTACTCTATGAATGCTTTTGCTATCGTGATAGCGAGTTTTGTGCTTGCGA
TGGGCAGCAGGAGGCGACACCCAGCACAGCAAGGTAGCTGTGCGGCGGAC
GAAGATGAGGAAGTGAACCCTGAAATTTTAGACGAAGAGGAGCAGGCGAC
CGTTATTCAAGACCTTCGACGAAAGAATGAGGAGCAAAACCGTCTCACAC
GGCATTTTCTGGCACTTCACACCTCCTCCACCCCTGGGCCTTTGGTGGCT
GCCGACGACCCCCCTCTTCGTGGTCACGGTCTCGCTGTACATCGATTGGG
ACCTCAAGAGATTGAATCGGGAAATTGATGCCTTGGATCGGATGCAATAT
CGATTTAAGAATGTGTAGGGTCGTGGCAACTCGCAACTATTAGCCATTAC
AATGTGTGCCAGTGTCATCAACCTCGTGGCGTGGTCATGCGAGTTTTCCT
GGGGCTATGTTTTTTCCTGCTCTTGATCTTCGCGTACTGCGCGGCTGTAA
CTTTCAAGGCGCCCTTTAAATTGGAGCACCAGCTGCATCTCCAGTCGGCC
ACTACATCAGCAGGCTTTCTAGCCACGTACTCTATGAATGCTTTTGCTAT
CGTGATAGCGAGTTTTGTGCTTGCGATGGGCAGCAGGAGGCGACACCCAG
CACAGCAAGGTAGCTGTGCGGCGGACGAAGATGAGGAAGTGAACCCTGAA
ATTTTAGACGAAGAGGAGCAGGCGACCGTTATTCAAGACCTTCGACGAAA
GAATGAGGAGCAAAACCGTCTCACACGGCATTTTCTGGCACTTCACACCT
CCTCCACCCCTGGGCCTTTGGTGGCTGCCGACGACCCCCCTCTTCGTGGT
CACGGTCTCGCTGTACATCGATTGGGACCTCAAGAGATTGAATCGGGAAA
TTGATGCCTTGGATCGGATGCAATATCGATTTAAGAATGTGTAGGGTCGT
GGCAACTCGCAACTATTAGCCATTACAATGTGTGCCAGTGTCATCAACCT
CGTGGCGTGGTCATGCGAGTTTTCCTGGGGCTATGTTTTTTCCTGCTCTT
GATCTTCGCGTACTGCGCGGCTGTAACTTTCAAGGCGCCCTTTAAATTGG
AGCACCAGCTGCATCTCCAGTCGGCCACTACATCAGCAGGCTTTCTAGCC
ACGTACTCTATGAATGCTTTTGCTATCGTGATAGCGAGTTTTGTGCTTGC
GATGGGCAGCAGGAGGCGACACCCAGCACAGCAAGGTAGCTGTGCGGCGG
ACGAAGATGAGGAAGTGAACCCTGAAATTTTAGACGAAGAGGAGCAGGCG
ACCGTTATTCAAGACCTTCGACGAAAGAATGAGGAGCAAAACCGTCTCAC
ACGG
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Synonyms
Publications