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Properties
| Property Name | Value |
|---|
| Product | mpv17-like protein |
| Orig transcript id | gnl|cribi|Naga_100036g4.2554.mrna |
| Orig protein id | gnl|cribi|Naga_100036g4.2554 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:709725..711647 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2578 ID=rna2578|Name=rna2578|organism=Nannochloropsis gaditana|type=mRNA|length=3340bp
TGCAATATAGAAAACTCTGCAGCGGTGCGGTCGGCAGGCCGGGGGCGGGA
AGTGTTTACCCACTCGTCTGCGCTTCACGCGCCTCCTCCCATCACAAGCA
GGACTCACTCCCGAAGACAAGAAGTGAGTGCACTGTGCAGGCTTTTTCTT
AGTCTCTCACACACCCTCTCCGACTCCTCAGCCTTACAGTTGCACATAGA
AGTGACATTGTCTGCACGTGGGGCAGTATGGAGGACGAGCTCTATGACGA
GTTCGGGAATTACATCGGCGGGGGCCTGGACGATAGCAGCGAGGAGGAGG
AAGAGGAAGAGGAAGAGGAAGAGGAAGAAGATGGCATGAATGGCTTTGGG
GACGAGGATGAAGGCGCAGATGGTATGGAAAGAGACGATGTTTTGGCAAC
GATGGAGGCGAACGGGGCGTCTAGCAGCATCGTGCTTCATGAAGACAAGA
AGTACTACCCAGAGATGGAGGAGGTCTACCCGGGCGTGAACACCGTGGTG
CTGGACGAGGATGCTCAAGGCTTGGACGAACCGATTATTCAACCCATTCG
TCCCAAAAAGTTTTCCACACTTTTATCGGAAAAAGAACTGCCGCAGACGC
GGTACACGCCCGAATTTTTGACCACGCTGATGGAGACCCCCACCCTCCTC
CGCAATGTCTGCGTCATGGGGGCGTTGCACCACGGGAAAACCCTGCTCAT
GGATCTTCTCATCCAACAAACACAAGAAGCAGCCTGGGACCCGAGTAAGG
AGGTTCGGTACACGGACACCCGCAAAGACGAGCAGGAGCGGGCGCTGAGC
ATCAAGTCCACGCCCGTGTCGTTGGTGCTGGAGGACACGCGAGGGAAGTC
CTTTCTGCTCAACGTGCTCGACACCCCCGGCATGGTCAACTTCTCCGACG
AAGTCAGTGCGGCCCTGCGAGCCTGTGATGGGGCGCTCTTAGTGGTGGAT
GCGGTGGAAGGAGTAATGATGCAGACAGAGCGCCTGATCAAGCAGGCCTT
AAGGGAGCAATTAGCCCTCGTGCTCGTCATCAACAAGGTAGACCGTCTCA
TTTTGGAGCTCAAGCTCCCGCCTGCCGACGCCTACTACAAGCTTAAGCAC
ACCATCGAGGAGGTGAATGCCTGCATCGAGCGGCACACGCCCAACGCCCT
TGTCCGGCGCCCGCAGCGGCTTTCTCCGGCGCTAGGGAACGTGGCCTTCG
CCTCCGCCGTGCACGGTTGGTGCTTCTCGCTGGGCTCGTTTGCCTCGCTC
TATGCCTCGTATCACAAGCTTGGTGACCAGTTTGAGACCACGGAGTTTGC
CAAGCGGCTCTGGGGCAACGCCTACTTGGACGAGGCCTCGAGGACCTTCC
GGAAGCAGCCCCCGCACCCAGAGGCCGACCGCTCCTTCGTACAGTTCATC
CTCGATCCCTTGTACAAAATATACTCGCATACCCTAGGCGAGGACGCCGC
GGAGCTGACTGAGGTGATTCGAGAGCTGGGAGTGCGCGTGCGTCGGGAAG
AACTGCACCTGGACCCAAAGCCCTTGCTGAAGCTCGTCCTCAGCAAGTTC
CTGGGCCCCCCCACCGGCCTGGTCGACATGCTGGCCCGCCACGTCCCCTC
CCCCGTCACCGCCGCGGCCGCCAAGGTGGAAGCTGTGTACACGGGTGCAC
AGGACTCGGAGGCGGCCCTGGCGATGAAACGCTGCGACCCGCGCGGCCCG
CTGATGTTGCACGTGGTCAAGCTGTACTCCGCCCCCGACGGGGAGAGCTT
CCAGTCCTTCGGGAGGGTCTACAGCGGGACCATCACTGCAGGGCAGCAGG
TGCGGGTCCTGGGGGAGGCATACACTTTGGAGGACGAGGAGGACATGGCG
GTGCGGGAAGTGAAGAGTCTGAGCATAGGGCAGGGCAGGTACAGGCTGGA
GGTGAGCACGGCGCGCCCGGGCAATTGGGTCCTGCTGGAGGGGGTGGATG
GGCCCATCAGCAAGACGGCGACCCTGATCGAGGCCAAAGGGAACGACGAG
GCAGCCATTTTCAAGCCCCTTAAGTTCGATGTGGCGCCCGTTTTAAAGCT
AGCGGTGGAGCCGTTGAACCCCGCGGAGCTTCCCAAGATGGTGGAGGCCC
TGCGGAAGATACGGAAAAGCTACCCGGCGGCGCAAACGAAAGTGGAAGAA
TCCGGTGAGCACGTGATCTTGGGCACGGGGGAACTGTATTTGGACTGCAT
CATGCACGACCTCCGGCATCTGCACGCGAGCCTGGAGGTAAAGGTGGCGG
ACCCGGTCGTCTCGTTCTGCGAGACGGTGCGTGAGACCTCGTCCTTGCGC
TGTTTCGCCGAGACGCCCAACAAGCAGAACCAGCTGCACATGATCGCCGA
GCCTCTGGAAGCGGGCATCGCGCGCGACATCGAAGAAGGGGCGGTGTCGA
CGGACTGGGACAGGCGGGCGGTCGGGGACTTCTTCCACGCCAAGTACGGA
TGGGATCTCTTGACCGCCCGCAACATTTGGGCATTCGGGCCGGACGCGCA
AGGGGCCAACGTCCTGATCAATGACACCATGCCGTCCGAGGTGGACCAAC
GGCTCTTGGACAACGTCAAGGACTCCATCGTCCAAGGTTTTCAGTGGGGG
TGTCGCGAAGGCCCTCTTTGCGACGAGCCCATTCGGAACGTGAAGTTCAA
AATTTTGGACGCAACGATTGCTCCCGAGCCCGTCCACCGCGGAGGGGGTC
AGGTTATTCCCACGGCTCGCCGCGTCGCCTACTCGGCCTTCTTGCTGGCC
ACGCCCCAGTTAATGGAGCCCTATTTCAAGGTGGAAGTGCAGTGCCCGGC
GGACTGTGTTGATGCCATCCATCTTGTCCTCCAACGGCGCCGAGGTCACG
TGAAAGAAGACCGTCCGAAGCCAGGAACCCCTTTCTATACAGTCGAAGCC
TTTCTCCCCGCGATCGACTCGTTTGGCTTTGAGACTGATCTGCGCGCGTA
CACGCAGGGGCAGGCCTTCTGCTCCCAGGTCTTTGACCATTGGAAAGAGG
TGCCCGGAGATCCCTTGGACAGGGAGGTAGTCTTGCACCCACTCGAGCCT
GCGCCGATCAATTCTTTGGCCCGTGATTTCATGGTCAAGACAAGGCGACG
TAAGGGGTTGAGTGAAGACGTGATGATAAGCAAATATTTCGATGCAGAGC
TCCTGCAGAGTCTTGCGAACCAACAGGCGGAGGCGGCGGCTTTGGAGATG
GGTGGGGCTGGATTTGGAGGCTACTACTAATGGTGACCACAGGCAGAGAT
GGCAGCACTATAGAGAGAAGACATCTTTCAAAAAGTCAAAACGAGACAGT
GAAGCCCAGAAACCGTCCTTGTTCCGTTACTCTTGCCACG back to topprotein sequence of rna2578 >rna2578-protein ID=rna2578-protein|Name=rna2578|organism=Nannochloropsis gaditana|type=polypeptide|length=289bp
MFKLLTATLAVGATAFMAPTRPAIKAVRGPSMSMMTGATMGKIDAMFEGA
SPFYQDVLRRRPETGHGGGIIIGGGGDGEGTGGGGGDGGGGEGNKGGENP
LQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRL
LKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFG
TMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPN
SQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGKKK back to topmRNA from alignment at CM002459.1:709725..711647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2578 ID=rna2578|Name=rna2578|organism=Nannochloropsis gaditana|type=mRNA|length=1923bp|location=Sequence derived from alignment at CM002459.1:709725..711647- (Nannochloropsis gaditana)
TGAGGGCGCGTGTCACATTTTCTGCTTTTCACACCGCGGCTGCCCTCTTC
CTAGCAATCAATTTAATATGCCCTTATAAACTCAAGAATTGATGTGCGCG
AGACGGATACCATCATGAGTGCGAGTGTCAGGCCCCGGTTCTGTCTCACC
ATGTATCTTTCTTTTCTTTTTCCGACTTCAAAGATCCGCCTTGTCGCACA
TCAAGTATCATGTTCAAGCTCCTCACCGCTACGCTGGCTGTGGGCGCTAC
CGCCTTCATGGCCCCCACACGTCCTGCTATCAAGGCCGGTAAGTGTTGAA
TTTCATCGTTGTGTGGTTGGTGTGACATTTTTGGGGCGAAAATGGATTCT
CTGGTCAGTTCTACCTCGTTATGGACCTCGTGCAGGTCGAATTCGCTGTG
CGTTTATTTTCGATGTTATATGGAGCTAAGGCCCGGGAGGGATGTTGTCT
CCCTGTATGCCCGTAAGACAGCTTTCTTGTCATGAAATGCGCGCTGCAGC
CACAGGCTGTCATAGAAGTCACCCTTGTGTCACGCTGAGAACATTAGAAC
AATCTGTCGGAAAGCATACCTCCGTCGGAAAGCATAAATCAGAAACGTAA
CAGCGAACTCTTCGGACACTTGACAACAAAATAACACAGTCCGTGGACCC
TCAATGTCCATGATGACGGGGGCGACGATGGGAAAGATCGATGCCATGTT
TGAGGGCGCCAGCCCCTTCTACCAGGACGTGTTGCGCCGTCGTCCTGAGA
CAGGTCACGGTGGAGGAATCATCATCGGTGGCGGTGGTGATGGTGAGGGC
ACTGGCGGTGGAGGGGGCGACGGGGGCGGCGGGGAAGGCAACAAGGGCGG
TGAGAACCCGTTGCAGTTGCTGTGGAAGGGGTACAACCAGCTCCTCAAGG
ATCAGCCGCTGCTCACGAAAGCCCTGACTTCCTTCGTGGGCTTCTCTGTC
GGGGATCTGCTCGCCCAGAAATTCATCGACAAGTCCGAAGTCGTGGACCT
GAAACGCCTGCTCAAGCTTGCATTCTTCGGGCTCCTGGTCCATGGCCCCA
CCGGCCACTACTTCTACGGTTTCCTGGACGGGAAGATGCCCGGCACTAGC
GCGGTGACCGTCGCCTCCAAAGTGGCCATCGACCAGCTGCTGTGGAACCC
GATCTTTGGAACCATGTTCTTCGGGTGGCTGGGTCTGACCGAGGGGCAGA
ACCTGGAAGGCATCAAGAATCGCATCGAGAAGGACCTGTGGGCTTCGGTC
AAGGGCTCTTGGACAGTCTGGCCCATCGCGCACGCCATTAACTTCCGATT
CATCCCCAATTCCCAGCGACTGCTCTACATCAACAGCGTCCAGATTGGCT
ACAACATGTTCCTTTCCTTCCTTGCAAACCGCAACGCCGCCCCGGAGCCC
GCCCCCGTCGCGGCCGGGAAGAAGAAGTGAAAGAGCTTTGCAGCAGGCCG
CAAAGCGAGCCCTAGGGTTGTGTGTTGATTTTTTCAGTACCAGCGTGTGG
GCAGGGATTGAGAATACATGCGAGCGAGCGTGATGTGGGAAAAAGAGAAC
AAGATAAAGGCAGTGCGTCAAGCCCAATAAAGAAGCAGCTCATGAGCACT
CGTGAGTGAGTGCGTGTTATATGGGTTCTGTTTGTAATAAGTTTCCAGAT
GGTTGTGTTTTAATCCGAGGCCAGGGATGTGAAGAAAAAAGTCGGGATTG
GGAAAGCTGAGAAACGACAAAAGTCTCTTTCGTTTAAGAGACCTTTAAAG
CTAAAAAGAGATTTTCATGACCAACGGCTCGCGCTTCTTTCCGTGTTCGA
AAGTATGCACGTTAATTCTCATGCCCGAGATGTCAAGTAAGTGGTTCAGA
GCCTCATGGTCCGCGACACCGTATGTCACCCCGTATCACGAATCAGAAAA
GCAAAACGTGGCAAGAGTAACGG back to topCoding sequence (CDS) from alignment at CM002459.1:709725..711647- >rna2578 ID=rna2578|Name=rna2578|organism=Nannochloropsis gaditana|type=CDS|length=1740bp|location=Sequence derived from alignment at CM002459.1:709725..711647- (Nannochloropsis gaditana)
TCCGTGGACCCTCAATGTCCATGATGACGGGGGCGACGATGGGAAAGATC
GATGCCATGTTTGAGGGCGCCAGCCCCTTCTACCAGGACGTGTTGCGCCG
TCGTCCTGAGACAGGTCACGGTGGAGGAATCATCATCGGTGGCGGTGGTG
ATGGTGAGGGCACTGGCGGTGGAGGGGGCGACGGGGGCGGCGGGGAAGGC
AACAAGGGCGGTGAGAACCCGTTGCAGTTGCTGTGGAAGGGGTACAACCA
GCTCCTCAAGGATCAGCCGCTGCTCACGAAAGCCCTGACTTCCTTCGTGG
GCTTCTCTGTCGGGGATCTGCTCGCCCAGAAATTCATCGACAAGTCCGAA
GTCGTGGACCTGAAACGCCTGCTCAAGCTTGCATTCTTCGGGCTCCTGGT
CCATGGCCCCACCGGCCACTACTTCTACGGTTTCCTGGACGGGAAGATGC
CCGGCACTAGCGCGGTGACCGTCGCCTCCAAAGTGGCCATCGACCAGCTG
CTGTGGAACCCGATCTTTGGAACCATGTTCTTCGGGTGGCTGGGTCTGAC
CGAGGGGCAGAACCTGGAAGGCATCAAGAATCGCATCGAGAAGGACCTGT
GGGCTTCGGTCAAGGGCTCTTGGACAGTCTGGCCCATCGCGCACGCCATT
AACTTCCGATTCATCCCCAATTCCCAGCGACTGCTCTACATCAACAGCGT
CCAGATTGGCTACAACATGTTCCTTTCCTTCCTTGCAAACCGCAACGCCG
CCCCGGAGCCCGCCCCCGTCGCGGCCGGGAAGAAGAAGTGAATGTTCAAG
CTCCTCACCGCTACGCTGGCTGTGGGCGCTACCGCCTTCATGGCCCCCAC
ACGTCCTGCTATCAAGGCCGTCCGTGGACCCTCAATGTCCATGATGACGG
GGGCGACGATGGGAAAGATCGATGCCATGTTTGAGGGCGCCAGCCCCTTC
TACCAGGACGTGTTGCGCCGTCGTCCTGAGACAGGTCACGGTGGAGGAAT
CATCATCGGTGGCGGTGGTGATGGTGAGGGCACTGGCGGTGGAGGGGGCG
ACGGGGGCGGCGGGGAAGGCAACAAGGGCGGTGAGAACCCGTTGCAGTTG
CTGTGGAAGGGGTACAACCAGCTCCTCAAGGATCAGCCGCTGCTCACGAA
AGCCCTGACTTCCTTCGTGGGCTTCTCTGTCGGGGATCTGCTCGCCCAGA
AATTCATCGACAAGTCCGAAGTCGTGGACCTGAAACGCCTGCTCAAGCTT
GCATTCTTCGGGCTCCTGGTCCATGGCCCCACCGGCCACTACTTCTACGG
TTTCCTGGACGGGAAGATGCCCGGCACTAGCGCGGTGACCGTCGCCTCCA
AAGTGGCCATCGACCAGCTGCTGTGGAACCCGATCTTTGGAACCATGTTC
TTCGGGTGGCTGGGTCTGACCGAGGGGCAGAACCTGGAAGGCATCAAGAA
TCGCATCGAGAAGGACCTGTGGGCTTCGGTCAAGGGCTCTTGGACAGTCT
GGCCCATCGCGCACGCCATTAACTTCCGATTCATCCCCAATTCCCAGCGA
CTGCTCTACATCAACAGCGTCCAGATTGGCTACAACATGTTCCTTTCCTT
CCTTGCAAACCGCAACGCCGCCCCGGAGCCCGCCCCCGTCGCGGCCGGGA
AGAAGAAGTGAATGTTCAAGCTCCTCACCGCTACGCTGGCTGTGGGCGCT
ACCGCCTTCATGGCCCCCACACGTCCTGCTATCAAGGCCG back to top
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