EWM28134.1, cds2570 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|585110478|gb|EWM28134.1| (mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 582.022 bits (1499), Expect = 0.000e+0 Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MFKLLTATLAVGATAFMAPTRPAIKAVRGPSMSMMTGATMGKIDAMFEGASPFYQDVLRRRPETGHGGGIIIGGGGDGEGTGGGGGDGGGGEGNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGKKK 289
MFKLLTATLAVGATAFMAPTRPAIKAVRGPSMSMMTGATMGKIDAMFEGASPFYQDVLRRRPETGHGGGIIIGGGGDGEGTGGGGGDGGGGEGNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGKKK
Sbjct: 1 MFKLLTATLAVGATAFMAPTRPAIKAVRGPSMSMMTGATMGKIDAMFEGASPFYQDVLRRRPETGHGGGIIIGGGGDGEGTGGGGGDGGGGEGNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGKKK 289
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|298714518|emb|CBJ27540.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 257.299 bits (656), Expect = 1.319e-81 Identity = 119/192 (61.98%), Postives = 144/192 (75.00%), Query Frame = 0
Query: 84 GGGDGGGGEGNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRN 275
G G+G K + L ++W Y LL QPLLTK+LTS GF++GDLLAQKFIDK E +DL RLLKLA FG L+HG +GH+FY FLD K+PGT+A+TVA KV IDQ+LWNPIFG MFFG++G +G GI +I+ +LW SVKGSWTVWP+AHAINFR IP SQRLLYIN++QI YN FLS +A R
Sbjct: 107 GASSSAEGDGEKKAKG-LGVIWAAYMSLLASQPLLTKSLTSMTGFALGDLLAQKFIDKKEEIDLPRLLKLASFGALIHGSSGHFFYNFLDSKIPGTAALTVAKKVFIDQVLWNPIFGCMFFGYMGAVDGMGPSGISEKIKNNLWTSVKGSWTVWPVAHAINFRMIPTSQRLLYINTIQIFYNCFLSVIAQRE 297
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|299471154|emb|CBN79011.1| (peroxisomal membrane protein-related [Ectocarpus siliculosus]) HSP 1 Score: 241.506 bits (615), Expect = 8.770e-77 Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVA 284
+W YN+ L QPLL KA+TSF GF+VGD+LAQKFI + D R L+L FG LVHGPTGHYFYG LD K+PGT +TVASKVAIDQ +WNPIFG MFF +LGL EG++++ I+ +I+ DL +V GSWTVW AH INF+F+P SQRLLYIN++QIGYN+FLSFL N+ A + A
Sbjct: 4 IWAAYNKALAAQPLLVKAMTSFTGFTVGDILAQKFISPEDDYDFMRTLRLGTFGALVHGPTGHYFYGMLDAKLPGTKPMTVASKVAIDQTIWNPIFGVMFFTYLGLAEGKSVDDIQKKIKNDLATAVMGSWTVWIPAHTINFKFVPTSQRLLYINTIQIGYNIFLSFLGNKKADDDSVKSA 184
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|1210515703|dbj|GAX25226.1| (hypothetical protein FisN_5Lh310 [Fistulifera solaris] >gi|1210524204|dbj|GAX16933.1| hypothetical protein FisN_5Hh310 [Fistulifera solaris]) HSP 1 Score: 230.72 bits (587), Expect = 7.273e-73 Identity = 109/174 (62.64%), Postives = 135/174 (77.59%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEV-VDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNA 276
LW YN++L QPLLTKALTS GF++GD+LAQKF++ ++ DL R ++L FG L+HG TGHYFYGFLDGK+PGT+ +TVA+KVAIDQ +WNPIFG MFFG+L EG++ E N+I+ DL +V GSW VW AH INF FIP SQRLLYINS+QIGYN+FLSFL N+
Sbjct: 4 LWARYNKMLDAQPLLTKALTSLTGFTLGDVLAQKFVEPTDKPYDLMRTVRLGSFGFLIHGTTGHYFYGFLDGKLPGTAPMTVATKVAIDQTIWNPIFGLMFFGYLNFVEGKSFEDYTNKIKADLKTAVMGSWAVWVPAHTINFAFIPPSQRLLYINSIQIGYNVFLSFLGNKKV 177
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|147905308|ref|NP_001090480.1| (uncharacterized protein LOC779393 [Xenopus laevis] >gi|114107768|gb|AAI23161.1| MGC154358 protein [Xenopus laevis]) HSP 1 Score: 229.18 bits (583), Expect = 4.993e-72 Identity = 110/186 (59.14%), Postives = 138/186 (74.19%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFI--DKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGK 287
LW YN L+ PLL KA+TS GF++GD+LAQKF+ DK + DL R ++L FG LVHGPTGHYFY +LD ++PGT+ TVA+KVAIDQLLWNP FG MFF +LGL EG++ I+ +I+ DL +V GSWTVW AH +NFRF+P+SQRLLYINS+QIGYN+FLSFL N+ EP V +
Sbjct: 5 LWTKYNAALETNPLLIKAVTSLTGFTLGDILAQKFVMPDKEKGYDLMRTVRLGSFGFLVHGPTGHYFYSWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFADIQTKIKNDLTTAVVGSWTVWIPAHFVNFRFVPSSQRLLYINSIQIGYNIFLSFLGNKK-VDEPEVVKEAE 189
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|585108126|gb|EWM26132.1| (mpv17-like protein [Nannochloropsis gaditana] >gi|585108127|gb|EWM26133.1| mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 227.254 bits (578), Expect = 2.442e-71 Identity = 110/186 (59.14%), Postives = 138/186 (74.19%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFI--DKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEPAPVAAGK 287
LW YN L+ PLL KALTS GF++GD+LAQKF+ D+ + DL R ++L FG LVHGPTGH+FYG+LD ++PGT+ TVA+KVAIDQLLWNP FG MFF +LGL EG++ I+ +I+ DL +V GSWTVW AH INFRF+P++QRLLYINS+QIGYN+FLSFL N+ AA K
Sbjct: 5 LWSQYNVALEKNPLLIKALTSLTGFTIGDVLAQKFVTPDEEKGYDLMRTVRLGSFGFLVHGPTGHFFYGWLDKQIPGTAMKTVATKVAIDQLLWNPCFGVMFFSYLGLAEGKSFTDIQAKIKNDLATAVVGSWTVWIPAHFINFRFVPSNQRLLYINSIQIGYNIFLSFLGNKKVDDTEELKAAAK 190
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|219126254|ref|XP_002183376.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405132|gb|EEC45076.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 226.868 bits (577), Expect = 2.809e-71 Identity = 107/178 (60.11%), Postives = 134/178 (75.28%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEV-VDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNAAPEP 280
LW YN +L QPLLTKALTS GFS+GD+LAQ FI++ + D R ++ FG L+HG TGHYFYGFLD K+PGT+ +TVASKVAIDQ +WNPIFG MFFG+L L EG++L+ +I+ DL +V GSW VW AH INF F+P +QRLLYIN++QIGYN+FLSFL N++ EP
Sbjct: 4 LWARYNSMLDAQPLLTKALTSMTGFSLGDILAQCFIEEGDKGYDPMRTFRMGSFGFLLHGTTGHYFYGFLDSKLPGTAPMTVASKVAIDQTIWNPIFGCMFFGYLNLMEGKSLDDYTTKIKTDLKTAVMGSWAVWVPAHTINFAFVPPAQRLLYINTIQIGYNVFLSFLGNKSVEEEP 181
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|545710488|ref|XP_005707552.1| (peroxisomal membrane MPV17/PMP22-like protein [Galdieria sulphuraria] >gi|452824026|gb|EME31032.1| peroxisomal membrane MPV17/PMP22-like protein [Galdieria sulphuraria]) HSP 1 Score: 221.09 bits (562), Expect = 1.433e-67 Identity = 101/182 (55.49%), Postives = 133/182 (73.08%), Query Frame = 0
Query: 95 KGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNA 276
KGG +PL W YNQLL+ +PLLTK+LTS +GF +GD+LAQKF+ ++ L RLL++A FG L+HGPTGH FY LD +PGT A VA KVAIDQ+LW PIF +FFG+L + E Q+ + + ++ +D ++ SW VWP+AHAINFRFIP+ QRLLYIN+VQI YN+FLS + N+
Sbjct: 101 KGGSHPLLSFWMRYNQLLESRPLLTKSLTSLIGFILGDILAQKFLSSDGILHLDRLLRMALFGFLIHGPTGHIFYTQLDKAIPGTEAWKVACKVAIDQVLWAPIFALIFFGFLAVLERQSFKQFEAKLRQDWKTAIFASWKVWPLAHAINFRFIPSHQRLLYINAVQIFYNVFLSIIGNKRT 282
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|676395101|ref|XP_009040828.1| (hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens] >gi|323448544|gb|EGB04441.1| hypothetical protein AURANDRAFT_15607, partial [Aureococcus anophagefferens]) HSP 1 Score: 215.698 bits (548), Expect = 3.606e-67 Identity = 102/168 (60.71%), Postives = 127/168 (75.60%), Query Frame = 0
Query: 104 LWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFL 271
+W Y L+ PLL K LTS +GF +GD+LAQ FI+KS+ D+ R ++ + FGLLVHG T H+FYG LDGK+PGT A VASKV IDQ+LWNPIFG MFFG++G+ EG + G +I+ DL V GSWTVWPIAHAINF+FIPNSQR+LYIN++QI YN FLS +
Sbjct: 1 VWAAYEAALEKDPLLIKGLTSMIGFFLGDVLAQCFIEKSDKYDIWRTIRFSSFGLLVHGTTSHWFYGKLDGKIPGTGAGAVASKVGIDQVLWNPIFGIMFFGYMGIFEGSGVGGTITKIKNDLLTQVTGSWTVWPIAHAINFKFIPNSQRVLYINTIQIFYNCFLSII 168
BLAST of EWM28134.1 vs. NCBI_GenBank
Match: gi|551581993|ref|XP_005776476.1| (putative peroxisomal membrane protein [Emiliania huxleyi CCMP1516] >gi|485628580|gb|EOD24047.1| putative peroxisomal membrane protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 217.624 bits (553), Expect = 1.713e-66 Identity = 101/184 (54.89%), Postives = 131/184 (71.20%), Query Frame = 0
Query: 93 GNKGGENPLQLLWKGYNQLLKDQPLLTKALTSFVGFSVGDLLAQKFIDKSEVVDLKRLLKLAFFGLLVHGPTGHYFYGFLDGKMPGTSAVTVASKVAIDQLLWNPIFGTMFFGWLGLTEGQNLEGIKNRIEKDLWASVKGSWTVWPIAHAINFRFIPNSQRLLYINSVQIGYNMFLSFLANRNA 276
G+ NP WK YN+LL ++PLL KA TSF+GF++GD+LAQ FI K + D RL +LA FG LVHG + H+FYG LD +PG A V +KV IDQ+LWNPI G MFF ++ E + L+ + ++ +L V GSW VWP+AHAINFRFIP+SQR+LYINS+QIGYN FLS ++NR+A
Sbjct: 88 GDDDESNPFASAWKKYNELLDEKPLLMKAFTSFLGFAIGDILAQIFIQKQDF-DWYRLFRLASFGFLVHGTSSHWFYGMLDSAIPGKGAQPVFTKVFIDQVLWNPILGIMFFSYVACLEWKGLQYVIDKTRNELLRQVTGSWKVWPLAHAINFRFIPSSQRVLYINSIQIGYNCFLSLISNRDA 270 The following BLAST results are available for this feature:
BLAST of EWM28134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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