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Properties
| Property Name | Value |
| Product | rna binding protein |
| Orig transcript id | gnl|cribi|Naga_100036g7.2526.mrna |
| Orig protein id | gnl|cribi|Naga_100036g7.2526 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002459.1 | supercontig | CM002459.1:699669..702998 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2575 ID=rna2575|Name=rna2575|organism=Nannochloropsis gaditana|type=mRNA|length=1084bp TATCAAGCAGACGACCTTGACGTGGAGTGAACTCAATGTTGGAGGGAAAA CAAATTTCAACACGCGCCAAAGAGGATACGAACCGCGCGCGCCGGCGTCC GGGAATGCCGGCTTTCTCTCACGTTCGGGCGTGCGGCCGCTCTTGTCCCG TTGACTAGCCAGGCAGGCGAAGGGATTGGTGCTGAAATGTCATTGCCTTT GGACAGCACCCCGTTGCCTTTCATGATTTATTTTGGAAACCAATTCTTTG GGTTGGCACGAGCGTTCACAGATCCGTTGGTGTGCGCCGTCTAGATTTGC CCTTGTTCGACCCGCAGTGTCTTTGTAAGTGTGTTAGGGCTCATTCGTTC CCTCTCCCGTATGCCTCTTTGCTCGACTCAGAACAGATTAAACATGCTAC CGACGGTACATTCCAACGTTTCTAAGCTGTCGAGCATTTCTAGGAGTACC GCCCTAAGGGTTTTAGTGACGAACACAGGTACGGCGACGATGGCATGCGC TCGTCGCTTCTCCACATCGACGCCTCTGGCAGCAGAAGGCGATGATCCAT CTGCTGCAGTCAATGATGCCCACGCATCCCCCCCGCCTCTAAATCCACGC TTGGATAGTCTAAATAGGGCCTACGCAACAGGGAGGCGCAAGACAAGTGT GGCTCGTGTGTGGCTTCTAGCGGGAGACGGTCGAATCGTGGTGAATGGGA AAGAAGTCCATGAATACTTTGGGCGGACGGCGTACAGGGACAAGCTGATT GAGCCGTTCGTGGTGACGGAGAGCGTCGGCCAATTCGACGTCAAGTGCAC TGTGAAAGGGGGGGGCACCACCGGGCAGGTAGGCGCCATTTCGTTGGGGA TATCGCGAGCCCTCGAAGTATGGGACCCGGCGCACCGGCCCCCTTTGGCC AAGGAGAGTCTGTTTACGCGGGACTCGCGGGCGGTCGAGTCCAAAAAATC CGGTCAGCCCAAGGCCAGGAAGAAGGATCAGTGGGTCAAACGCTAAGCGA GAGACGTCTAAAAGCAGGTGTTCGATACTGTCGAGTATGCTGGGATTTAA GAAGAAGGAAATCACGAGCGCGCGAAAAAGCTGA back to topprotein sequence of rna2575 >rna2575-protein ID=rna2575-protein|Name=rna2575|organism=Nannochloropsis gaditana|type=polypeptide|length=595bp MSGSAVPEINQAATTEQTRATAGAPAGLTKDGDAIKLFVGQIPKDMGEDA LRPFFAEYGPIFELTVIRDKTSGMHRGCAFLTYCTKEAAQAASLALHNKL KLPDAQNALQVRPADLHTERENKLFVGMLPKNVDEGLVEGLFAPFGKIKE IHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFA ESKRSGEGGQGAGVGGGRGRRGGSEGGRGSGPGGPMEGLLMAPMMMVPGP LGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGGGGGGEAPGGGS SPYSGAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRA PPYLYYPPYFGPGGPQGHGAAADGGGGSSGRAGGGGPGSPFVYGGGVPGG MRVNTAVGAPHGAGHAGAFASRGGGGGGSKPLEGPAGANLFIYHLPHDLT DADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMN GFQIGTKRLKVQHKRIVSGPSPSTPSSISSSISYLTQQHGHSSTHGGGPG AGGGRRTPPPGVTFQPSALARRGGGVLPLFPLPPPGTPRPRTSSK back to topmRNA from alignment at CM002459.1:699669..702998+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2575 ID=rna2575|Name=rna2575|organism=Nannochloropsis gaditana|type=mRNA|length=3330bp|location=Sequence derived from alignment at CM002459.1:699669..702998+ (Nannochloropsis gaditana) ATATCGACTTGTTCACGAACGCGATCATCAAGCGACATGAAGGCCGCAGT
GCATGAGGAGGGTGCGGACACTTGAACTGatcgcttcctttccccaaaCC
AATCGTTCTCACTGACAGAAGACGCCGAGCGACTTTGGCAATTTGGGGTC
GGCAGGGAGAGGCACCGCGCAGATGGGgaaggcctcgtcctcgacctAGG
TTCAAGTCATTATCCGGAGCAGCTAGCACGCGTACAGGAGAGATTTGGGG
GGAAAAACGGACCCTATTATCGCCCGATTGTTTCATTGTGGGCCAAGAGT
TTGAGGAAGAAGCTGGACAATATGTCTGGCTCCGCCGTGCCCGAAATAAA
CCAGGCGGCCACGACCGAGCAGACAAGAGCCACGGCAGGCGCCCCAGCCG
GCCTGACGAAGGACGGGGATGCGATCAAGCTTTTCGTCGGGCAGATCCCA
AAGGAcatgggggaggatgcgCTCCGACCATTTTTTGCTGAGTACGGACC
CATCTTCGAATTGACAGTGATACGTGATAAGACGAGCGGCATGCATCGTG
GCTGTGCGTTCCTCACGTACTGCACGAAGGAGGCCGCACAAGCCGCCTCG
CTGGCTTTACACAATAAGTTGAAGCTTCCGGATGCTCAAAATGCTCTTCA
GGTGAGTGAATTTGGAGAGGACACTAGAGGACAATCTGTTTCGGCGGGTG
TATCTGTATATTAGCAGTGGGAAACTGAGCTTCGTTTGCTCCTCACCCCA
AAAGGCTGCAATTCCGTCTTTGAAGTATTTTGTTTTGTGACTTCCCTTGT
TGTTTTCTCCGAAGTCTATCGATAATCACGTCCCTGCACGATCGCCTAGG
TTCGCCCCGCGGACCTGCacacggagagggagaacaAGCTATTCGTAGGC
ATGCTGCCCAAGAATGTGGACGAGGGCCTTGTGGAGGGCCTTTTCGCGCC
GTTCGGAAAGATAAAAGAGATCCACATTATTCGTTCCGTCGAGGTAGTAG
TAGGCAAGGATGGGGAATGcgccgggaagaaggggtggcGAAGCTGTGTC
CTCAGCGTGCCTCTTGGAGTCGGCGATGCATCTCTTAcattcatttcccc
tccctcggttgCTGTACACAGGGCGAGGGCAAAGGATGCGCTTTTTTGAA
ATTCGTGGAGAGATCCTCGGCGATCCAGGCCATCGAGGCCTTGAACGAGA
gacaggtggtggagggagcctCCCGGCCCATGGTTGTCAGATTCGCAGAG
TCGAAGCgttcgggggaggggggtcaAGGAGCGGGAGTAGGTGGCGGAAG
GggccgacggggagggagcgaaggcgggcggggaagcgGCCCGGGTGGCC
CCATGGAAGGCTTGCTGATGGCAccgatgatgatggtgcCGGGGCCTCTG
GGTCACTCGCTGCACCCGCCCAACCTGCCCTTGAgaggggggagcgaggg
gggagcggCAGGCGGCGGCTTGGGGGTGGCGGGCTTGAGTCCAacgggga
ggggcaaggggggagggggcggcggggaggcccCCGGAGGAGGCTCGTCT
CCGTATTCCGGGGCTCCTTACTGGATGCTGGGTCCGCACGGGCAGCCGCA
GGCCAGCGcccacttccccttccaggcGGGGCCCGTGCCGATGGGGATGC
TAGGCCTGCCGCACCACCAGTACCTCCCTTACGGCGCGGTCAGAgcccct
ccctacctgtaCTACCCGCCCTACTTCGGGCCGGGCGGGCCGCAGGGACA
CGGAGCAGCcgcggatggaggaggggggagcagtggcagggccggagggg
gcggccCGGGCTCGCCGTTTGTGTACGGGGGCGGTGTGCCGGGCGGGATG
AGGGTGAACACGGCCGTGGGGGCTCCGCACGGGGCGGGGCACGCGGGAGC
TTTCGCCtcgagggggggcgggggcggggggtccAAGCCCTTGGAGGGCC
CCGCGGGGGCGAACCTCTTCATCTACCACCTCCCGCACGACCTGACGGAC
GCGGACCTGGCCACCGCCTTCAACCCCTTCGGCACCGTGGTCTCGGCCAA
GGTCTACGTGGACAAGAACTcgggggagagcaagggctTCGGCTTCGTCT
CTTACGACTCGCCCCTGGCGGCGGACGCGGCCATCAAGGCCATGAACGGT
TTTCAGATCGGCACCAAGCGCCTGAAAGTCCAGCACAAGCGCATCGTCAG
CGGgcccagcccctccaccccatcctccatctcctcctccatctcctacC
TAACTCAACAGCACGGGCACAGCAGCACTCATGGCGgcgggccgggggcg
gggggggggaggcggacaccaccaccaggcgTCACATTCCAGCCAAGCGC
CCTCGCtcgccgaggcggaggagtcctccccctcttccccctcccccccc
ccggcaccccCCGACCCCGGACCAGCAGCAAATAAGcgtggcgggggagc
ggGACAAAACGGTGGAtggaaggcagaggaggggccggtCTCAGCGATAA
GAGAGGGGTCTCAAAAAGCAAGCGCGTTGCCGTCCAAGGAGGCTGCCGCG
CCCAGCGAGAGGAACGCGAGTCTAGAGGAGGGTGTGGAGAAATTAAAGAT
ATAGGGGCGAAGGAACTACGGGGCAGGTTGTATAGGAGCAGGCGACACGC
ATAAGAGCACGACGGAAACAGTGGCAGCGGTGTCAGGGAAAGAGACGAGG
GAAAGCGCTGTTAAACTGTCTCTCATGTCGAAGCAGTGGACCGACGCGTC
GAAGCCCTAAAGCGCTCATGCGCTCGCACGTACGCACATTTTTATCAGTA
CAGCTTTGGGCACTCTCGCGTTGATTTCCATCATGGTGAGAGGTGCAGCC
CGATTTTGTGAGGAGAAAAGCACTGCTTTAGGTAACGGCGAGTCTTTGCG
GATGTGTCGGTGTGAGTGAGtcaaggaagggcgggaaagcggagTGGGGT
CAGGGCGTCAAGAATACATCGACGTATTCGATGGAGGCACGGTGGATCTG
AGCGGAGTGTGTCCCTACAGGGCGCACTGTTGAGTAGGCAGAAATCTGAT
GGACGAGGCCTCGTGGCTTTCCCTTGTTTCAGGTATTGTGAGGGTGACGG
CTTGCGGGAGAACTCGTGCTAAATATCGGCCTACGGTAAATTCTTTGAGC
CCCGCAGATCGGCGTGGCACGGCAGACGTGGTGTTTACTTCGCATGGGGT
ACAAATTCTTTTCATTGAATGAGCGGGGGATTTAAGAGATTGACAAGACA
AGCTATTAAAAATATGGAGAATGACTTGCTGGAAGGGAGCACATAAAAGA
ATAAGTCTGAGAAATGTTCGGTCATGCATT back to topCoding sequence (CDS) from alignment at CM002459.1:699669..702998+ >rna2575 ID=rna2575|Name=rna2575|organism=Nannochloropsis gaditana|type=CDS|length=5364bp|location=Sequence derived from alignment at CM002459.1:699669..702998+ (Nannochloropsis gaditana) ATGTCTGGCTCCGCCGTGCCCGAAATAAACCAGGCGGCCACGACCGAGCA GACAAGAGCCACGGCAGGCGCCCCAGCCGGCCTGACGAAGGACGGGGATG CGATCAAGCTTTTCGTCGGGCAGATCCCAAAGGAcatgggggaggatgcg CTCCGACCATTTTTTGCTGAGTACGGACCCATCTTCGAATTGACAGTGAT ACGTGATAAGACGAGCGGCATGCATCGTGGCTGTGCGTTCCTCACGTACT GCACGAAGGAGGCCGCACAAGCCGCCTCGCTGGCTTTACACAATAAGTTG AAGCTTCCGGATGCTCAAAATGCTCTTCAGGTTCGCCCCGCGGACCTGCa cacggagagggagaacaAGCTATTCGTAGGCATGCTGCCCAAGAATGTGG ACGAGGGCCTTGTGGAGGGCCTTTTCGCGCCGTTCGGAAAGATAAAAGAG ATCCACATTATTCGTTCCGTCGAGGGCGAGGGCAAAGGATGCGCTTTTTT GAAATTCGTGGAGAGATCCTCGGCGATCCAGGCCATCGAGGCCTTGAACG AGAgacaggtggtggagggagcctCCCGGCCCATGGTTGTCAGATTCGCA GAGTCGAAGCgttcgggggaggggggtcaAGGAGCGGGAGTAGGTGGCGG AAGGggccgacggggagggagcgaaggcgggcggggaagcgGCCCGGGTG GCCCCATGGAAGGCTTGCTGATGGCAccgatgatgatggtgcCGGGGCCT CTGGGTCACTCGCTGCACCCGCCCAACCTGCCCTTGAgaggggggagcga ggggggagcggCAGGCGGCGGCTTGGGGGTGGCGGGCTTGAGTCCAacgg ggaggggcaaggggggagggggcggcggggaggcccCCGGAGGAGGCTCG TCTCCGTATTCCGGGGCTCCTTACTGGATGCTGGGTCCGCACGGGCAGCC GCAGGCCAGCGcccacttccccttccaggcGGGGCCCGTGCCGATGGGGA TGCTAGGCCTGCCGCACCACCAGTACCTCCCTTACGGCGCGGTCAGAgcc cctccctacctgtaCTACCCGCCCTACTTCGGGCCGGGCGGGCCGCAGGG ACACGGAGCAGCcgcggatggaggaggggggagcagtggcagggccggag ggggcggccCGGGCTCGCCGTTTGTGTACGGGGGCGGTGTGCCGGGCGGG ATGAGGGTGAACACGGCCGTGGGGGCTCCGCACGGGGCGGGGCACGCGGG AGCTTTCGCCtcgagggggggcgggggcggggggtccAAGCCCTTGGAGG GCCCCGCGGGGGCGAACCTCTTCATCTACCACCTCCCGCACGACCTGACG GACGCGGACCTGGCCACCGCCTTCAACCCCTTCGGCACCGTGGTCTCGGC CAAGGTCTACGTGGACAAGAACTcgggggagagcaagggctTCGGCTTCG TCTCTTACGACTCGCCCCTGGCGGCGGACGCGGCCATCAAGGCCATGAAC GGTTTTCAGATCGGCACCAAGCGCCTGAAAGTCCAGCACAAGCGCATCGT CAGCGGgcccagcccctccaccccatcctccatctcctcctccatctcct acCTAACTCAACAGCACGGGCACAGCAGCACTCATGGCGgcgggccgggg gcggggggggggaggcggacaccaccaccaggcgTCACATTCCAGCCAAG CGCCCTCGCtcgccgaggcggaggagtcctccccctcttccccctccccc cccccggcaccccCCGACCCCGGACCAGCAGCAAATAAATGTCTGGCTCC GCCGTGCCCGAAATAAACCAGGCGGCCACGACCGAGCAGACAAGAGCCAC GGCAGGCGCCCCAGCCGGCCTGACGAAGGACGGGGATGCGATCAAGCTTT TCGTCGGGCAGATCCCAAAGGAcatgggggaggatgcgCTCCGACCATTT TTTGCTGAGTACGGACCCATCTTCGAATTGACAGTGATACGTGATAAGAC GAGCGGCATGCATCGTGGCTGTGCGTTCCTCACGTACTGCACGAAGGAGG CCGCACAAGCCGCCTCGCTGGCTTTACACAATAAGTTGAAGCTTCCGGAT GCTCAAAATGCTCTTCAGGTTCGCCCCGCGGACCTGCacacggagaggga gaacaAGCTATTCGTAGGCATGCTGCCCAAGAATGTGGACGAGGGCCTTG TGGAGGGCCTTTTCGCGCCGTTCGGAAAGATAAAAGAGATCCACATTATT CGTTCCGTCGAGGGCGAGGGCAAAGGATGCGCTTTTTTGAAATTCGTGGA GAGATCCTCGGCGATCCAGGCCATCGAGGCCTTGAACGAGAgacaggtgg tggagggagcctCCCGGCCCATGGTTGTCAGATTCGCAGAGTCGAAGCgt tcgggggaggggggtcaAGGAGCGGGAGTAGGTGGCGGAAGGggccgacg gggagggagcgaaggcgggcggggaagcgGCCCGGGTGGCCCCATGGAAG GCTTGCTGATGGCAccgatgatgatggtgcCGGGGCCTCTGGGTCACTCG CTGCACCCGCCCAACCTGCCCTTGAgaggggggagcgaggggggagcggC AGGCGGCGGCTTGGGGGTGGCGGGCTTGAGTCCAacggggaggggcaagg ggggagggggcggcggggaggcccCCGGAGGAGGCTCGTCTCCGTATTCC GGGGCTCCTTACTGGATGCTGGGTCCGCACGGGCAGCCGCAGGCCAGCGc ccacttccccttccaggcGGGGCCCGTGCCGATGGGGATGCTAGGCCTGC CGCACCACCAGTACCTCCCTTACGGCGCGGTCAGAgcccctccctacctg taCTACCCGCCCTACTTCGGGCCGGGCGGGCCGCAGGGACACGGAGCAGC cgcggatggaggaggggggagcagtggcagggccggagggggcggccCGG GCTCGCCGTTTGTGTACGGGGGCGGTGTGCCGGGCGGGATGAGGGTGAAC ACGGCCGTGGGGGCTCCGCACGGGGCGGGGCACGCGGGAGCTTTCGCCtc gagggggggcgggggcggggggtccAAGCCCTTGGAGGGCCCCGCGGGGG CGAACCTCTTCATCTACCACCTCCCGCACGACCTGACGGACGCGGACCTG GCCACCGCCTTCAACCCCTTCGGCACCGTGGTCTCGGCCAAGGTCTACGT GGACAAGAACTcgggggagagcaagggctTCGGCTTCGTCTCTTACGACT CGCCCCTGGCGGCGGACGCGGCCATCAAGGCCATGAACGGTTTTCAGATC GGCACCAAGCGCCTGAAAGTCCAGCACAAGCGCATCGTCAGCGGgcccag cccctccaccccatcctccatctcctcctccatctcctacCTAACTCAAC AGCACGGGCACAGCAGCACTCATGGCGgcgggccgggggcgggggggggg aggcggacaccaccaccaggcgTCACATTCCAGCCAAGCGCCCTCGCtcg ccgaggcggaggagtcctccccctcttccccctccccccccccggcaccc cCCGACCCCGGACCAGCAGCAAATAAATGTCTGGCTCCGCCGTGCCCGAA ATAAACCAGGCGGCCACGACCGAGCAGACAAGAGCCACGGCAGGCGCCCC AGCCGGCCTGACGAAGGACGGGGATGCGATCAAGCTTTTCGTCGGGCAGA TCCCAAAGGAcatgggggaggatgcgCTCCGACCATTTTTTGCTGAGTAC GGACCCATCTTCGAATTGACAGTGATACGTGATAAGACGAGCGGCATGCA TCGTGGCTGTGCGTTCCTCACGTACTGCACGAAGGAGGCCGCACAAGCCG CCTCGCTGGCTTTACACAATAAGTTGAAGCTTCCGGATGCTCAAAATGCT CTTCAGGTTCGCCCCGCGGACCTGCacacggagagggagaacaAGCTATT CGTAGGCATGCTGCCCAAGAATGTGGACGAGGGCCTTGTGGAGGGCCTTT TCGCGCCGTTCGGAAAGATAAAAGAGATCCACATTATTCGTTCCGTCGAG GGCGAGGGCAAAGGATGCGCTTTTTTGAAATTCGTGGAGAGATCCTCGGC GATCCAGGCCATCGAGGCCTTGAACGAGAgacaggtggtggagggagcct CCCGGCCCATGGTTGTCAGATTCGCAGAGTCGAAGCgttcgggggagggg ggtcaAGGAGCGGGAGTAGGTGGCGGAAGGggccgacggggagggagcga aggcgggcggggaagcgGCCCGGGTGGCCCCATGGAAGGCTTGCTGATGG CAccgatgatgatggtgcCGGGGCCTCTGGGTCACTCGCTGCACCCGCCC AACCTGCCCTTGAgaggggggagcgaggggggagcggCAGGCGGCGGCTT GGGGGTGGCGGGCTTGAGTCCAacggggaggggcaaggggggagggggcg gcggggaggcccCCGGAGGAGGCTCGTCTCCGTATTCCGGGGCTCCTTAC TGGATGCTGGGTCCGCACGGGCAGCCGCAGGCCAGCGcccacttcccctt ccaggcGGGGCCCGTGCCGATGGGGATGCTAGGCCTGCCGCACCACCAGT ACCTCCCTTACGGCGCGGTCAGAgcccctccctacctgtaCTACCCGCCC TACTTCGGGCCGGGCGGGCCGCAGGGACACGGAGCAGCcgcggatggagg aggggggagcagtggcagggccggagggggcggccCGGGCTCGCCGTTTG TGTACGGGGGCGGTGTGCCGGGCGGGATGAGGGTGAACACGGCCGTGGGG GCTCCGCACGGGGCGGGGCACGCGGGAGCTTTCGCCtcgagggggggcgg gggcggggggtccAAGCCCTTGGAGGGCCCCGCGGGGGCGAACCTCTTCA TCTACCACCTCCCGCACGACCTGACGGACGCGGACCTGGCCACCGCCTTC AACCCCTTCGGCACCGTGGTCTCGGCCAAGGTCTACGTGGACAAGAACTc gggggagagcaagggctTCGGCTTCGTCTCTTACGACTCGCCCCTGGCGG CGGACGCGGCCATCAAGGCCATGAACGGTTTTCAGATCGGCACCAAGCGC CTGAAAGTCCAGCACAAGCGCATCGTCAGCGGgcccagcccctccacccc atcctccatctcctcctccatctcctacCTAACTCAACAGCACGGGCACA GCAGCACTCATGGCGgcgggccgggggcggggggggggaggcggacacca ccaccaggcgTCACATTCCAGCCAAGCGCCCTCGCtcgccgaggcggagg agtcctccccctcttccccctccccccccccggcaccccCCGACCCCGGA CCAGCAGCAAATAA back to top
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