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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100036g25.2523.mrna |
| Orig protein id | gnl|cribi|Naga_100036g25.2523 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:668567..669120 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2560 ID=rna2560|Name=rna2560|organism=Nannochloropsis gaditana|type=mRNA|length=2628bp
GCCATGGGAGGCAGGGTTCTTGTTGCCAGGGGTGAGGCGGAGGATATCCG
AAGGGAGATATGGAACGCGACGCCTCTCGACGCAAATGAGGCTGTAGGAA
CAAGTTCCTAAGAAGTGATGGCATGTGAAATAGCCATGGTGTCGTGCTGA
TGGCTGGGAGTGAAAGCTTGCGGTCGAAGAAGGGCGTAAAGCCGAGGCGA
AGATGCCTGGACTCCGAGGGGATGACTCTTCCCTTTCTTTTCCCGCGTGC
CTGATCATGTATGCCCTACGCTCGGATGCTCCATCTTACTGTGGCATCAC
CTCATTCATGATACTACGGGTGGAACGTGTTGGTAGCCGCATGCTACGGC
AGACGCCGAAGGTGAAGATAGCACACATTGGTGCCTAGCTACGGCCTCTC
ACGCCTAATTCCAACACATGCTACTTACTAACTACAACCATGGACACGAA
TACGAGACAGGGCCGCGCATTCAGAGCTGTCAGTGTAACAGATCAAGTTC
ATCTGGCCACCTAGGTACAATGGCCACCCTGGGGCTTTCAAGGCTTTTGC
CCAAACCCACCCAGACTTATCAAGTCCATAAAGACGACCCGTCCCCCACC
GCCCTGGCGCGCCTCGAGATTTCAGGCAAGAAGGTAATCCCACCGTATGG
AGAACGCAATGGCTTTGTGCCCCGAGCTGTGGGTGATTTTGGTGACGGAG
GAGCTTTCCCGGAAGTGCACGTGGTACAATACCCGCTGAATATGGGCAAG
AAAGACGCCGCCAGCGCCAGTAATGCCATTGTGTCTGTGGACGTGGCTGC
GGACGGCAAGGTGAATTTCGACGCGATCGTCAGGCAAGGCACAAACCGCA
ACAAGATCGTCCATTCCAAGCTCTCTGACATGAGGGGCGGGGACGCGGAT
GAGAACGTGCTGAGCAAGCCCACCCCGGAGGAGGAGGCGGAGCAGGCGGC
CAAGACCAAGAGCGCCCTGGAGGCCTTGATAGGAGGGAAAATTGCAGCAG
CGCGTCCTGTGCAGCTCGCGAAAGCCCCAGGCTCGGAAGAGCCGACGTAC
GTGCGCTACACGCCGAACCCTAACGCACCGGGCTACAACACGAACGCGAA
GCAGCGTGTGATCGAGCTGGTGGACGCCCAGGTGGACCCGATGGAGCCCG
CCAAGCACAAGCACAAGAAGGTGCCCCGAGGCCCGCCCGAGGACCCTGTC
CCCGTCCTGCACTCGCCGCCGCGGAAGGTGTCGGTGGAGGACCAGGAAGC
CTGGAAGATCCCCCCCTGCATTTCGAACTGGAAGAACGCCAAGGGCTACA
CCATCCCCTTGGACAAGCGCCTGGCCGCGGACGGGCGGGGTCTGCAGGAG
ACGACGATCAACCCGAAATTCGCGGCACTGCCTCAGGCCTTGTACATCGC
GGAGGACAAGGCTCGGGAGCAGATCGCGGCCCGCGCGAAGATCGATCAGA
AGATCAAGAAGCTGGAGAGAGAGCAGAAGGAGCAGGAGCTGCGAGAGCTG
GCGGCCCGGTCGCGGATGGCGAGGGCGGGGGTGCCGGGCGAGGTCGGCGG
GCGAAGAGAGGAGGAGTCAGTGGGGCACTATGGAAGGGCGGGGGGAGGGG
CCGGGGGAGTGCGGGAGCGAGTGGAGGATGTGGGGGAGGAGAGGGGGGCG
GAGGTGGTAAGAGGGATGACGGAGGAGGAGCGCGTGGCGGCGGCGCAGCG
AGACAAATTGAGGGTCGAGCGGCGGAAGGAGCTAGAGAGAGACATGCGGA
AGGACAACATGCGGGGGGCGATGCGCAAAGGCAAGCTAGACCGGGACGGG
GAGCGCGATATCTCGGAGAAGATCGCCTTGGGCATGCACGTCGGGTCCGC
CAAACTCACCGGGGACGAGGTGTACGACTCCCGCCTTTTCAACCAGGGGG
GCGGTGTGGAGGCGGGCTTTGGGGGGGAGGACGAGTACAACGTGTACAAC
AAGGCTCTGTTCGACAAAGGCACCGGCAGCAGCATCTATCGGCCGCGCGG
GGACGTGGGAGTGGGCGGTCTGGACGAGGACGGGGGGGCGGACGCGGAGG
CTCAGTACAAGAAGATCGCCAACGCGGACAAGTTCCGGCCCGACCGAGGG
TTCGCGGGCGCGGACTACCACGGGGGGGGCCAAGCCCGGGATAAGCCCGT
GCAGTTCGAGAGGGAGGGAGGGCGGGAAGGGGGGGGCAGGGAGAGTGGAG
GGAGTGGCCGGCGGGAGGATGAGGAAGACTTCTTCGGCGTGGGGGACTTC
GTGGAGGAGGGCGGGGGGGGGAAGAGGAAGGACCCGTTGGGACGGATTGG
GGGCAGGGGCCTGATGAGTGCGGGCACGGCCGGCTCGAAAGAGGAACTGG
AGATGGGGAGCAAGCGGCAGAAAATAAATTTCACCGAGGCGGGGGGAGGG
GGGCGGCGGGAGCGGTCGCCGTAAGGGGAAGGCAGGGCAAGGATTGAGTG
GGAGGGTGTGGGTGGGGGAGAATTTGGCTGGCAATAAAATACAATACTTT
TACACATGGAATGTGCGCTTTCTTATTTACCGTCGGCATGTTTCGCCTAT
ATCATTCTTCGCGTCTCAAGAATCATCATGTACCGACTGGAAGGGGGCGG
GTAAGACCACTCGCTTTCGTGGAACAAG back to topprotein sequence of rna2560 >rna2560-protein ID=rna2560-protein|Name=rna2560|organism=Nannochloropsis gaditana|type=polypeptide|length=87bp
MNEELVPTASFASRGVAFHISLRISSASPLATRTLPPMASSSLGTSDRPG
ESSENFDTNTPIVNPCILSSIGLSSSPHFLGACLAWP back to topmRNA from alignment at CM002459.1:668567..669120+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2560 ID=rna2560|Name=rna2560|organism=Nannochloropsis gaditana|type=mRNA|length=554bp|location=Sequence derived from alignment at CM002459.1:668567..669120+ (Nannochloropsis gaditana)
ATGAATGAGGTGATGCCACAGTAAGATGGAGCATCCGAGCGTAGGGCATA
CATGATCAGGCAcgcgggaaaagaaagggaagagtcATCCCCTCGGAGTC
CAGGCATCTTCGCCTCGGCTTTACGCCCTTCTTCGACCGCAAGCTTTCAC
TCCCAGCCATCAGCACGACACCATGGCTATTTCACATGCCATCACTTCTT
AGGAACTTGTTCCTACAGCCTCATTTGCGTCGAGAGGCGTCGCGTTCCAT
ATCTCCCTTCGGAtatcctccgcctcaccCCTGGCAACAAGAACCCTGCC
TCCCATggcatcgtcctccctcggcacCTCAGATCGGCCGGGAGAGTCCA
GTGAAAACTTCGACACCAACACGCCAATTGTGAACCCTTGCATCTTAAGC
AGTATTGGACTATCATCCTCGCCCCATTTTTTGGGTGGTAAGATTGATTT
ATCAAGAAGCCAGTGCGGGAGCATTGAACACCTTACATGCCATTTGCACT
CATAAGCACATTTCAACCCTAATTTCCCATCCAGCATGTTTGGCTTGGCC
TTAA back to topCoding sequence (CDS) from alignment at CM002459.1:668567..669120+ >rna2560 ID=rna2560|Name=rna2560|organism=Nannochloropsis gaditana|type=CDS|length=792bp|location=Sequence derived from alignment at CM002459.1:668567..669120+ (Nannochloropsis gaditana)
ATGAATGAGGAACTTGTTCCTACAGCCTCATTTGCGTCGAGAGGCGTCGC
GTTCCATATCTCCCTTCGGAtatcctccgcctcaccCCTGGCAACAAGAA
CCCTGCCTCCCATggcatcgtcctccctcggcacCTCAGATCGGCCGGGA
GAGTCCAGTGAAAACTTCGACACCAACACGCCAATTGTGAACCCTTGCAT
CTTAAGCAGTATTGGACTATCATCCTCGCCCCATTTTTTGGGTGCATGTT
TGGCTTGGCCTTAAATGAATGAGGAACTTGTTCCTACAGCCTCATTTGCG
TCGAGAGGCGTCGCGTTCCATATCTCCCTTCGGAtatcctccgcctcacc
CCTGGCAACAAGAACCCTGCCTCCCATggcatcgtcctccctcggcacCT
CAGATCGGCCGGGAGAGTCCAGTGAAAACTTCGACACCAACACGCCAATT
GTGAACCCTTGCATCTTAAGCAGTATTGGACTATCATCCTCGCCCCATTT
TTTGGGTGCATGTTTGGCTTGGCCTTAAATGAATGAGGAACTTGTTCCTA
CAGCCTCATTTGCGTCGAGAGGCGTCGCGTTCCATATCTCCCTTCGGAta
tcctccgcctcaccCCTGGCAACAAGAACCCTGCCTCCCATggcatcgtc
ctccctcggcacCTCAGATCGGCCGGGAGAGTCCAGTGAAAACTTCGACA
CCAACACGCCAATTGTGAACCCTTGCATCTTAAGCAGTATTGGACTATCA
TCCTCGCCCCATTTTTTGGGTGCATGTTTGGCTTGGCCTTAA back to top
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