|
|
Properties
| Property Name | Value |
|---|
| Product | threonine dehydratase |
| Orig transcript id | gnl|cribi|Naga_100036g30.2524.mrna |
| Orig protein id | gnl|cribi|Naga_100036g30.2524 |
| Gene | TAL2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:656628..659222 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2555 ID=rna2555|Name=rna2555|organism=Nannochloropsis gaditana|type=mRNA|length=1568bp
CAGGGCATCGGCTGTAATGCTGGAATGCCACTACCAGCAAATGCTTTTTA
CGGATGAGAATTTGGGAATGTTCCATCGCCTTCATTCGCGTCTGTAATAC
AAAACCATCGCTACAGGACGCACGAGATGTAAAACCGCCTGGGTTTAATT
ATCGAGTGTCGAGTGCGGATCCCTGCAAGGATGCCGCTGTTCTTCTAGCT
CCCGTACATTGCGCACTTTATCGAAGTAGAACGCTGCTGATCCCATACCG
GATGCATGACGAGGACTTGATTTTACGGAAGGTGTGACATCGGTTGCAAC
GTTCATGCATTCCTCATCTTTCATACCGCTGCGACAGGATTAGAATAAAA
TGGAGAGGACTTTGCGTAAGATGTTCAAGACATGCGGATCGCCGCTGCCT
GCGTTTTGGTGTGGTGTCCTCTTGGGGTTGGCAATGTCATTTGTCGTGAT
CAAATCAAGCCCTAAGCGCAAGGCTATTCCAGGTGCTTTTTGGCTGACCG
TGCAAGTAACCTTTAAACGCGCTGAAGACGTTGATATTTTTAAAACCGCT
TTTGCGCCGCTTGCCGCATTCGTCGAAAAGAATGAACCGAGGACTTTGTC
CTACAGCATGGCGCAATCAGACAAGGACCCCAAGACTGTGCTGCTCTTCG
AGAGATACGTGGACAAGAATGACGCTTATCTGGAAGTCCATCGCAAAAGC
GCCCCATTCAAGGTATTTCGGCCCCAGCTCGCTGCTATGGAGGCCACGAT
TTCGGGGGAATCATACATCGAAAGTAATATGGGCTTTATGTCCTGATATA
TCCAGGAGGTAGTACACGTATAACACAGAACAAGAACGAAACAGAAAAAA
GGCGTCTCCCTGAGAATCTTCTTTACTCAAGTATGTGAGTCTTCTTAATG
TCCGTGAAGCTTGCTTCTTGCGAGAGTAGAGTGATACCTCATTTCATGAA
ATTGAGAGAGTGTTGTTTCACGGGCAACACGAGTCTTTGCTTGCTTAGAA
AGTGCTCTGCAGAGCATGGAATAAAGCTATCATTCTCGTCTTTCTCCGCA
CATCATTGTATTACGTCTGACAGACCAGATGTTAAAAACATGACTGCCTT
CCTCTCCAGCTGGCACTACTTCCCATAGTCACTTATGTACGCTTGGTCTT
GCTGCGGGTAGTCGGACCACCGCTCACTACCTGCCCCTTGTTGTATGTCA
AAAGAGCAAAGGTGTGGAGGGCGAGCATTGGCACATGGATCACTGCCGGG
TTAAAGCTGAAGGCGCTGCCCTTGTTGCTTCCCCATTTATTATAAACCAT
GTCGCTTAAAACCAAGGCATGGAAAGCTAGAAAGACGCCATTCAGAATAG
CTTTGTCTTTAGTGCTGTATTTGAGCGCCGCACCACCTGCGATAAGCCCG
ACGGCTAAGGATTGAAAGGCAAGGCAACGCAAGATTGTCCAAGCGCTGCT
TCCGTGCCATTTTGTCTCTAAACCCAACAGGCCCGGAACAATTTGTTGAG
GACGGAAAAAAAGCATGGCAACTTCCCAAATGTGAATGCCAGCATGAAGA
AGTAAGGCAACACTAAGC back to topprotein sequence of rna2555 >rna2555-protein ID=rna2555-protein|Name=rna2555|organism=Nannochloropsis gaditana|type=polypeptide|length=554bp
MLPGGGWRRVAQLPATMLLQRAAASSSGASVVSSANSMTDEFPDHTDYLA
RILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYN
KIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKV
NAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAG
QGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVE
AEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMV
TVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAI
ASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTE
FSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNE
MAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLF
HYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYF
QFLY back to topmRNA from alignment at CM002459.1:656628..659222- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2555 ID=rna2555|Name=rna2555|organism=Nannochloropsis gaditana|type=mRNA|length=2595bp|location=Sequence derived from alignment at CM002459.1:656628..659222- (Nannochloropsis gaditana)
TGCGATAATTCAGCTTGCACTATCTCCTTATTTTCTGTTGCTGCTCGTGA
GAGATCATCTCTCTAGGATGCTCCTCGTCGCCGTTCAACTCCCATACGTC
TATGTTGATGACGAAAATGCTTGCATGCGTTCAGCAAAGTAGTCTTTGTT
TCTTGCCAAAATACGTGCGGAGTTCATTGATTATTTTCATTTATGCATTC
ATAATGTGCTTTTTTAACCCCCCCATGCCCAAGTGGAGGCAACATTAGCC
AGGGCCGCCCGTTCCTGTCAAGGAGAGTATCTTGTCTGATACAATCCCGC
ACGCACACTCCTCTAACGTACACACGACGCACAGACATCAACTCACCAGG
AGATAAACGAAATTCAATTAAAGTTTTCAGACAGGTCTCATAGAGGACCG
GAACAAACTTTGCGTGGTACGACGCCGTAAGTAATTAGAGTAGGAATGCT
GCCAGGTGGGGGATGGCGGAGGGTGGCACAACTTCCAGCCACAATGCTAC
TGCAACGAGCAGCCGCAAGCAGTAGTGGGGCGTCAGTTGTCAGCAGTGCC
AATAGTATGACTGATGAATTTCCTGACCATACTGATTACTTGGCACGCAT
TTTGAATGCCCGCGTGTATGAGCTTGCCATCGAGACACCCCTGCAGCCAG
CTCCATGCATGTCCAAGACCATCCACAACAATGTATTATTTAAGGTACGC
AGGATATCAGGTTAGAAAGGTAACATGCATTCACGTGCGGCCTTTGGCAT
GGTTTGTAAATGTTTTCGTGTGTAAATTATCTGGCGCTCATCAAATCGTG
CCACGCACCATACACGTAGAGGGAAGATTTACAGCCAGTTTTCTCTTTCA
AACTGCGCGGCGCGTACAACAAAATCGTAAGCACGCCCGCTGCAGACCTT
GAACGAGGCGTCGTAGCATGTTCGGCAGGAAATCACGCTCAAGGCGTTGC
TCTTTCGGCCTCACGAAAGAACATCAAGGCCGTGATAGTGATGCCTCTTG
CCACTCCTCAAATCAAAGTGAACGCGGTGAAGCGCTTCGGAGGCCCCACA
GTGGTCGTGAAGCTGCATGGGAAAAACTACGACGAGGCATCAGAGGAAGC
GCAGCGCCTGTCGCGGGAGGAGGGTCTGACAATGATTCATCCCTTCGACG
ATCCGGATGTGATCGCGGGCCAGGGCACCATTGGCATGGAGATCTTGAAG
GCCACAAACGGACAGCCTTTGGACGCTATATTTGTCTGTGTTGGGGGTGG
TGGTCTGTTATCAGGGGTGGCTGCCTATGTGAAAGCGGTGCGGCCGTCCG
TAAAGGTGATCGGCGTCGAGGCGGAGGACGCGGCGGGTATGACAACGTCC
TTGCAGGCGGGGCATGTGGTAGCACTTGATCGCGTGGGCCTTTTTGCTGA
CGGGGCAGCCGTCCGAGTCGTGGGTAGAGAGACGTTCCGACTGTGCAGCC
ATCTGGTGGACGAGATGGTGACGGTCACAACGGATGAGATCTGCGCCGCT
ATCAAGGCCGGCTTCCAGGACACGCGGTCAGTCATGGAGCCCGCAGGCGC
CTTGGCCATTGCTGGAGCCCAGAAGTATTGCGCGGCACAGCAATGGAGGG
GTAAGACTGTCGTAGCCATTGCGTCGGGGGCGAACATGGACTTCGACCGA
TTGCGCTTCGTGAGTGAGCGATCGGACTCGACCGAGACTCTCCTTTCCGT
CAGGATCAACGAGCGACCTGGCAGCTTCCGCCAGCTTTATTCTGGCATTT
TCCCGCGTAATGTTACTGAGTTCTCGTACAGGTTCAACAGCCCTGACACA
GCGGATGTGATCATCAGCTTCCAGTGCATGGCAGGCGCTAGTCGTGAGGA
GGATAAGCAGCAAGTCCTGGAGAACATTCGAAATCTAGGTGCGTAATTTG
ACACAATTTGATTTTCCGCATCATATGTTTCTGTAGGACATAGCATGTTT
TTGCGCGCGTTTTCGATGAGTCACTCTCTGGCTAAAACCTTACCATTTGC
ACGCAGACTTCGAGGTTGTGGATCTGAGCGGGAATGAGATGGCGAAGGCT
CATGCTCGATATTTGGCCGGTGGGCGTGCACCGCACGTGAAACATGAGCA
GCTATATCGCTTTGAGTTTCCCGAGCGGCCGGGTGCTCTCCATGCGTTTC
TGACCGATTTGAATAAAGGGTGGAATGTCAGCCTCTTCCATTATCGTAAT
CAGGGCGGAGACATCGGAAGGGTGCTGGTCGGATTACAAGTTCCCCCCAA
GGAGGTTGGGCAGTTTCATGATTGGCTCACAACACTTCCCCAATTGGGCT
ACGTATGGTACGCCGAAACCAAAAATCCTGTTTATTTCCAGTTCTTGTAC
TAAAGGGATCGCAACTGAGGTGAACTTCTCCCTGTGCGTGTATTACAAAT
TACCTGAAGAAATGCAAACTGTAGTGGGTGACTGGAACAGACGCTCTGTT
TGAAAGAGGGCTTAACAAAAAAATCGAGATTATCAAATAAATACTTTGGG
GTCAAGCATTGCCTCGCCTTTCGGCGCAAACCGCCATCAAGTTTGTTTGA
TCGTCGTCTATCTTGCATGTCGAAGTTGATAAAGAAAGGGAAGCC back to topCoding sequence (CDS) from alignment at CM002459.1:656628..659222- >rna2555 ID=rna2555|Name=rna2555|organism=Nannochloropsis gaditana|type=CDS|length=4995bp|location=Sequence derived from alignment at CM002459.1:656628..659222- (Nannochloropsis gaditana)
ACTTCGAGGTTGTGGATCTGAGCGGGAATGAGATGGCGAAGGCTCATGCT
CGATATTTGGCCGGTGGGCGTGCACCGCACGTGAAACATGAGCAGCTATA
TCGCTTTGAGTTTCCCGAGCGGCCGGGTGCTCTCCATGCGTTTCTGACCG
ATTTGAATAAAGGGTGGAATGTCAGCCTCTTCCATTATCGTAATCAGGGC
GGAGACATCGGAAGGGTGCTGGTCGGATTACAAGTTCCCCCCAAGGAGGT
TGGGCAGTTTCATGATTGGCTCACAACACTTCCCCAATTGGGCTACGTAT
GGTACGCCGAAACCAAAAATCCTGTTTATTTCCAGTTCTTGTACTAAAGG
GAAGATTTACAGCCAGTTTTCTCTTTCAAACTGCGCGGCGCGTACAACAA
AATCGTAAGCACGCCCGCTGCAGACCTTGAACGAGGCGTCGTAGCATGTT
CGGCAGGAAATCACGCTCAAGGCGTTGCTCTTTCGGCCTCACGAAAGAAC
ATCAAGGCCGTGATAGTGATGCCTCTTGCCACTCCTCAAATCAAAGTGAA
CGCGGTGAAGCGCTTCGGAGGCCCCACAGTGGTCGTGAAGCTGCATGGGA
AAAACTACGACGAGGCATCAGAGGAAGCGCAGCGCCTGTCGCGGGAGGAG
GGTCTGACAATGATTCATCCCTTCGACGATCCGGATGTGATCGCGGGCCA
GGGCACCATTGGCATGGAGATCTTGAAGGCCACAAACGGACAGCCTTTGG
ACGCTATATTTGTCTGTGTTGGGGGTGGTGGTCTGTTATCAGGGGTGGCT
GCCTATGTGAAAGCGGTGCGGCCGTCCGTAAAGGTGATCGGCGTCGAGGC
GGAGGACGCGGCGGGTATGACAACGTCCTTGCAGGCGGGGCATGTGGTAG
CACTTGATCGCGTGGGCCTTTTTGCTGACGGGGCAGCCGTCCGAGTCGTG
GGTAGAGAGACGTTCCGACTGTGCAGCCATCTGGTGGACGAGATGGTGAC
GGTCACAACGGATGAGATCTGCGCCGCTATCAAGGCCGGCTTCCAGGACA
CGCGGTCAGTCATGGAGCCCGCAGGCGCCTTGGCCATTGCTGGAGCCCAG
AAGTATTGCGCGGCACAGCAATGGAGGGGTAAGACTGTCGTAGCCATTGC
GTCGGGGGCGAACATGGACTTCGACCGATTGCGCTTCGTGAGTGAGCGAT
CGGACTCGACCGAGACTCTCCTTTCCGTCAGGATCAACGAGCGACCTGGC
AGCTTCCGCCAGCTTTATTCTGGCATTTTCCCGCGTAATGTTACTGAGTT
CTCGTACAGGTTCAACAGCCCTGACACAGCGGATGTGATCATCAGCTTCC
AGTGCATGGCAGGCGCTAGTCGTGAGGAGGATAAGCAGCAAGTCCTGGAG
AACATTCGAAATCTAGATGCTGCCAGGTGGGGGATGGCGGAGGGTGGCAC
AACTTCCAGCCACAATGCTACTGCAACGAGCAGCCGCAAGCAGTAGTGGG
GCGTCAGTTGTCAGCAGTGCCAATAGTATGACTGATGAATTTCCTGACCA
TACTGATTACTTGGCACGCATTTTGAATGCCCGCGTGTATGAGCTTGCCA
TCGAGACACCCCTGCAGCCAGCTCCATGCATGTCCAAGACCATCCACAAC
AATGTATTATTTAAGACTTCGAGGTTGTGGATCTGAGCGGGAATGAGATG
GCGAAGGCTCATGCTCGATATTTGGCCGGTGGGCGTGCACCGCACGTGAA
ACATGAGCAGCTATATCGCTTTGAGTTTCCCGAGCGGCCGGGTGCTCTCC
ATGCGTTTCTGACCGATTTGAATAAAGGGTGGAATGTCAGCCTCTTCCAT
TATCGTAATCAGGGCGGAGACATCGGAAGGGTGCTGGTCGGATTACAAGT
TCCCCCCAAGGAGGTTGGGCAGTTTCATGATTGGCTCACAACACTTCCCC
AATTGGGCTACGTATGGTACGCCGAAACCAAAAATCCTGTTTATTTCCAG
TTCTTGTACTAAAGGGAAGATTTACAGCCAGTTTTCTCTTTCAAACTGCG
CGGCGCGTACAACAAAATCGTAAGCACGCCCGCTGCAGACCTTGAACGAG
GCGTCGTAGCATGTTCGGCAGGAAATCACGCTCAAGGCGTTGCTCTTTCG
GCCTCACGAAAGAACATCAAGGCCGTGATAGTGATGCCTCTTGCCACTCC
TCAAATCAAAGTGAACGCGGTGAAGCGCTTCGGAGGCCCCACAGTGGTCG
TGAAGCTGCATGGGAAAAACTACGACGAGGCATCAGAGGAAGCGCAGCGC
CTGTCGCGGGAGGAGGGTCTGACAATGATTCATCCCTTCGACGATCCGGA
TGTGATCGCGGGCCAGGGCACCATTGGCATGGAGATCTTGAAGGCCACAA
ACGGACAGCCTTTGGACGCTATATTTGTCTGTGTTGGGGGTGGTGGTCTG
TTATCAGGGGTGGCTGCCTATGTGAAAGCGGTGCGGCCGTCCGTAAAGGT
GATCGGCGTCGAGGCGGAGGACGCGGCGGGTATGACAACGTCCTTGCAGG
CGGGGCATGTGGTAGCACTTGATCGCGTGGGCCTTTTTGCTGACGGGGCA
GCCGTCCGAGTCGTGGGTAGAGAGACGTTCCGACTGTGCAGCCATCTGGT
GGACGAGATGGTGACGGTCACAACGGATGAGATCTGCGCCGCTATCAAGG
CCGGCTTCCAGGACACGCGGTCAGTCATGGAGCCCGCAGGCGCCTTGGCC
ATTGCTGGAGCCCAGAAGTATTGCGCGGCACAGCAATGGAGGGGTAAGAC
TGTCGTAGCCATTGCGTCGGGGGCGAACATGGACTTCGACCGATTGCGCT
TCGTGAGTGAGCGATCGGACTCGACCGAGACTCTCCTTTCCGTCAGGATC
AACGAGCGACCTGGCAGCTTCCGCCAGCTTTATTCTGGCATTTTCCCGCG
TAATGTTACTGAGTTCTCGTACAGGTTCAACAGCCCTGACACAGCGGATG
TGATCATCAGCTTCCAGTGCATGGCAGGCGCTAGTCGTGAGGAGGATAAG
CAGCAAGTCCTGGAGAACATTCGAAATCTAGATGCTGCCAGGTGGGGGAT
GGCGGAGGGTGGCACAACTTCCAGCCACAATGCTACTGCAACGAGCAGCC
GCAAGCAGTAGTGGGGCGTCAGTTGTCAGCAGTGCCAATAGTATGACTGA
TGAATTTCCTGACCATACTGATTACTTGGCACGCATTTTGAATGCCCGCG
TGTATGAGCTTGCCATCGAGACACCCCTGCAGCCAGCTCCATGCATGTCC
AAGACCATCCACAACAATGTATTATTTAAGACTTCGAGGTTGTGGATCTG
AGCGGGAATGAGATGGCGAAGGCTCATGCTCGATATTTGGCCGGTGGGCG
TGCACCGCACGTGAAACATGAGCAGCTATATCGCTTTGAGTTTCCCGAGC
GGCCGGGTGCTCTCCATGCGTTTCTGACCGATTTGAATAAAGGGTGGAAT
GTCAGCCTCTTCCATTATCGTAATCAGGGCGGAGACATCGGAAGGGTGCT
GGTCGGATTACAAGTTCCCCCCAAGGAGGTTGGGCAGTTTCATGATTGGC
TCACAACACTTCCCCAATTGGGCTACGTATGGTACGCCGAAACCAAAAAT
CCTGTTTATTTCCAGTTCTTGTACTAAAGGGAAGATTTACAGCCAGTTTT
CTCTTTCAAACTGCGCGGCGCGTACAACAAAATCGTAAGCACGCCCGCTG
CAGACCTTGAACGAGGCGTCGTAGCATGTTCGGCAGGAAATCACGCTCAA
GGCGTTGCTCTTTCGGCCTCACGAAAGAACATCAAGGCCGTGATAGTGAT
GCCTCTTGCCACTCCTCAAATCAAAGTGAACGCGGTGAAGCGCTTCGGAG
GCCCCACAGTGGTCGTGAAGCTGCATGGGAAAAACTACGACGAGGCATCA
GAGGAAGCGCAGCGCCTGTCGCGGGAGGAGGGTCTGACAATGATTCATCC
CTTCGACGATCCGGATGTGATCGCGGGCCAGGGCACCATTGGCATGGAGA
TCTTGAAGGCCACAAACGGACAGCCTTTGGACGCTATATTTGTCTGTGTT
GGGGGTGGTGGTCTGTTATCAGGGGTGGCTGCCTATGTGAAAGCGGTGCG
GCCGTCCGTAAAGGTGATCGGCGTCGAGGCGGAGGACGCGGCGGGTATGA
CAACGTCCTTGCAGGCGGGGCATGTGGTAGCACTTGATCGCGTGGGCCTT
TTTGCTGACGGGGCAGCCGTCCGAGTCGTGGGTAGAGAGACGTTCCGACT
GTGCAGCCATCTGGTGGACGAGATGGTGACGGTCACAACGGATGAGATCT
GCGCCGCTATCAAGGCCGGCTTCCAGGACACGCGGTCAGTCATGGAGCCC
GCAGGCGCCTTGGCCATTGCTGGAGCCCAGAAGTATTGCGCGGCACAGCA
ATGGAGGGGTAAGACTGTCGTAGCCATTGCGTCGGGGGCGAACATGGACT
TCGACCGATTGCGCTTCGTGAGTGAGCGATCGGACTCGACCGAGACTCTC
CTTTCCGTCAGGATCAACGAGCGACCTGGCAGCTTCCGCCAGCTTTATTC
TGGCATTTTCCCGCGTAATGTTACTGAGTTCTCGTACAGGTTCAACAGCC
CTGACACAGCGGATGTGATCATCAGCTTCCAGTGCATGGCAGGCGCTAGT
CGTGAGGAGGATAAGCAGCAAGTCCTGGAGAACATTCGAAATCTAGATGC
TGCCAGGTGGGGGATGGCGGAGGGTGGCACAACTTCCAGCCACAATGCTA
CTGCAACGAGCAGCCGCAAGCAGTAGTGGGGCGTCAGTTGTCAGCAGTGC
CAATAGTATGACTGATGAATTTCCTGACCATACTGATTACTTGGCACGCA
TTTTGAATGCCCGCGTGTATGAGCTTGCCATCGAGACACCCCTGCAGCCA
GCTCCATGCATGTCCAAGACCATCCACAACAATGTATTATTTAAG back to top
|