EWM28104.1, cds2547 (CDS) Nannochloropsis gaditana

Overview
NameEWM28104.1
Unique Namecds2547
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:658529..658777 -
Alignment locationCM002459.1:657335..658403 -
Alignment locationCM002459.1:656870..657216 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28104.1
Productthreonine dehydratase
Orig transcript idgnl|cribi|Naga_100036g30.2524.mrna
GeneTAL2
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:658529..658777 -
CM002459.1supercontigCM002459.1:657335..658403 -
CM002459.1supercontigCM002459.1:656870..657216 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0009056catabolic process
GO:0006520cellular amino acid metabolic process
GO:0009097isoleucine biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
GO:0004794L-threonine ammonia-lyase activity
Vocabulary: INTERPRO
TermDefinition
IPR000634Ser/Thr_deHydtase_PyrdxlP-BS
IPR001926TrpB-like_PLP-dep
IPR005787Thr_deHydtase_biosynth
IPR001721ACT-like_dom
Homology
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|585110448|gb|EWM28104.1| (threonine dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 1148.27 bits (2969), Expect = 0.000e+0
Identity = 554/554 (100.00%), Postives = 554/554 (100.00%), Query Frame = 0
Query:    1 MLPGGGWRRVAQLPATMLLQRAAASSSGASVVSSANSMTDEFPDHTDYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFLY 554
            MLPGGGWRRVAQLPATMLLQRAAASSSGASVVSSANSMTDEFPDHTDYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFLY
Sbjct:    1 MLPGGGWRRVAQLPATMLLQRAAASSSGASVVSSANSMTDEFPDHTDYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFLY 554          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|299116041|emb|CBN74457.1| (Threonine ammonia-lyase [Ectocarpus siliculosus])

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 336/506 (66.40%), Postives = 405/506 (80.04%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            YL ++LNARVY++AI+TPLQ A  MS  ++NN+ FKREDLQPV SFKLRGAYNK+ S P + L+ GVVACSAGNHAQGVALSA + N+KAVIVMPLATP IKVNAV+  GGPTV ++LHG NYDEA+EEA RL  EEGL++IHPFDDP+VIAGQGTIGMEILK  NG+ LD +F C GGGGL++GVAAY+K VRP VKVIGVE EDAAGMT S +A  V+ L  VGLFADGAAVR  G ETFR+    VD M+TVTTDEIC AIK GF DTR VMEPAGALAIAG +KY   Q   G +VVA+ SGANMDFDRLRFVSER+DS+ETL+S  I ERPG+F++LYS +FPRNVTEFSYR+++   AD+++SFQ + G SR++D   V+E +R+   EV+DLS NE+AKAHAR++ GGR+P+V +E LYRFEFPE PGAL  FL  L+ GWNVSLFHYRN G D GRVL G+QVPP E+ +FH++L    +LGY ++ E++NPVY QF 
Sbjct:   89 YLNKVLNARVYDVAIDTPLQKAVNMSNDLNNNIFFKREDLQPVHSFKLRGAYNKMSSLPRSALDTGVVACSAGNHAQGVALSAKKLNVKAVIVMPLATPMIKVNAVRNHGGPTVSIRLHGMNYDEAAEEANRLVEEEGLSLIHPFDDPEVIAGQGTIGMEILKERNGRALDIVFCCCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGMTLSTKADQVITLPSVGLFADGAAVRTTGAETFRVARDYVDSMMTVTTDEICQAIKLGFNDTRCVMEPAGALAIAGMRKYLKDQGLVGHSVVAVCSGANMDFDRLRFVSERADSSETLISATIPERPGAFQELYSVVFPRNVTEFSYRYHTSSRADMMVSFQALEGTSRKDDALTVVEGLRSKGMEVMDLSSNELAKAHARHMVGGRSPNVMNEVLYRFEFPESPGALSRFLAALSGGWNVSLFHYRNHGSDFGRVLAGIQVPPGEMAEFHEFLK---ELGYTYHDESRNPVYSQFF 591          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|1210522232|dbj|GAX18994.1| (threonine dehydratase [Fistulifera solaris])

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 316/506 (62.45%), Postives = 381/506 (75.30%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            YL+RILNARVY+ AIET LQ A  +S  + NN+  KRED QPVFSFK+RGAYNK+      +L RGVVACSAGNHAQGVALSA     +AVIVMPLATP IKVN+V+  GGPTV V+L G NYDEA+ EA+RL  EE +  +HPF+DP VIAGQGTIGMEILK + G+PLDAIFVC GGGG+L+G+AAYVK VRP+VKVIGVEA DAAGMT S+QAG VV L  VGLFADGAAV+ VG ETFR+C  LVDEM+TV TD+IC AIK  + D R V+EPAGALA+AG +KY    +  G+++VAI SGANMDFDRLRFVSER+D +E  L+V I E+PG+FR LYS I+PRNVTEFSYR+     A + ISFQ +     E D + V+ N++   F  +D++ NE+AK H R+LAGGR+P V+HE+L+RFEFPE PGAL  FL  L+  WNVSLFHYRN G D GRVLVG+QVP  + G    +L    +LGY +  ET NP+Y  FL
Sbjct:   75 YLSRILNARVYDAAIETDLQHAKNLSAQLKNNIYLKREDTQPVFSFKIRGAYNKMAHLTPEELSRGVVACSAGNHAQGVALSARMLQCRAVIVMPLATPSIKVNSVRVHGGPTVEVRLFGNNYDEAAAEAKRLQMEENMVFVHPFNDPYVIAGQGTIGMEILKESVGRPLDAIFVCCGGGGMLAGIAAYVKRVRPTVKVIGVEAADAAGMTESMQAGKVVTLPSVGLFADGAAVKTVGDETFRVCQKLVDEMITVDTDQICNAIKLTYNDARVVLEPAGALAVAGMRKYIEDNEITGQSLVAITSGANMDFDRLRFVSERADGSERTLAVTIPEQPGTFRMLYSLIWPRNVTEFSYRYEGTGEAHIFISFQPVRNI--ENDFEGVMHNLKENGFSCLDMTHNELAKVHIRHLAGGRSP-VEHERLFRFEFPESPGALQRFLLSLDMAWNVSLFHYRNHGDDFGRVLVGIQVPSDD-GNLQSFLK---KLGYRYIEETDNPIYRTFL 573          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|1210525878|dbj|GAX15484.1| (threonine dehydratase [Fistulifera solaris])

HSP 1 Score: 636.336 bits (1640), Expect = 0.000e+0
Identity = 316/506 (62.45%), Postives = 381/506 (75.30%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            YL+RILNARVY+ AIET LQ A  +S  + NN+  KRED QPVFSFK+RGAYNK+      +L RGVVACSAGNHAQGVALSA     +AVIVMPLATP IKVN+V+  GGPTV V+L G NYDEA+ EA+RL  EE +  +HPF+DP VIAGQGTIGMEILK + G+PLDAIFVC GGGG+L+G+AAYVK VRP+VKVIGVEA DAAGMT SL+AG VV L  VGLFADGAAV+ VG ETFR+C  LVDEM+TV TD+IC AIK  + D R V+EPAGALA+AG +KY    +  G+++VAI SGANMDFDRLRFVSER+D +E  L+V I E+PG+FR LYS I+PRNVTEFSYR+     A + ISFQ +     E D + V+ N++   F  +D++ NE+AK H R+LAGGR+P V+HE+L+RFEFPE PGAL  FL  L+  WNVSLFHYRN G D GRVLVG+QVP  E     +  + L +LGY +  ET NP+Y  FL
Sbjct:   74 YLSRILNARVYDAAIETDLQHAKNLSAQLKNNIYLKREDTQPVFSFKIRGAYNKMAHLTPEELSRGVVACSAGNHAQGVALSARMLQCRAVIVMPLATPSIKVNSVRVHGGPTVEVRLFGNNYDEAAAEAKRLQMEENMVFVHPFNDPYVIAGQGTIGMEILKESVGRPLDAIFVCCGGGGMLAGIAAYVKRVRPTVKVIGVEAADAAGMTESLEAGRVVTLPSVGLFADGAAVKTVGDETFRVCQKLVDEMITVDTDQICNAIKLTYNDARVVLEPAGALAVAGMRKYIEENEITGQSLVAITSGANMDFDRLRFVSERADGSERTLAVTIPEQPGTFRMLYSLIWPRNVTEFSYRYEGTGEAHIFISFQPVRNI--ENDFEGVMHNLKENGFSCLDMTHNELAKVHIRHLAGGRSP-VEHERLFRFEFPESPGALQRFLLSLDMAWNVSLFHYRNHGDDFGRVLVGIQVP--ESSDDANLQSFLKKLGYRYIEETDNPIYRTFL 574          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|922861392|gb|KOO29149.1| (threonine dehydratase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0
Identity = 334/569 (58.70%), Postives = 399/569 (70.12%), Query Frame = 0
Query:    8 RRVAQLPATMLLQR------AAASSSGASV--VSSANSMTDEFP----------DHTDYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREE--DKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNK---GWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            RR A L +  L+QR      A ASS+G S   VS+     DE             H +YL +ILNARVYE+A ETPLQ AP +S  + N V  KREDLQP+FSFK+RGAYNKI       L+ G+VACSAGNHAQGVALSAS   + AVIVMP  TP IKV+AV++  G    V+LHG  YDEA+ EA RL ++EG T+IHPFDDP VIAGQGTIGME+LK   G+ LDAIFVC GGGG+L+G+AAYVK VRP V VIGVEAEDAAGMT S++AG + +L+ VG+FADGAAV+ VG+ETFR+C+ LVD+MVTV+TDEICAAIK GF DTR V+EPAGALAIAG +K+      R +T VAIASGANMDFDRLRFVSER+D++ET+LSVRI ERPG+FR L   +FPRNVTEFSYR   P  A V +SFQ     S E+  D +  +  +R     V DL  NE+AK+H R+L GGRA     E+L RFEFPERPGAL  FL  L+    GWNVSLF YRN G DIGRVL GLQVP +++ +   WL    +LGY  + E  N V   FL
Sbjct:    7 RRGASLLSRSLVQRPLLPAAAWASSAGCSCRGVSTKAVPLDESSASWGNNLRGLGHNNYLGKILNARVYEVAKETPLQYAPSLSTELGNAVYLKREDLQPIFSFKIRGAYNKIAQLSREQLKAGIVACSAGNHAQGVALSASIIGVDAVIVMPTGTPSIKVDAVRKLKGN---VRLHGATYDEAAAEAHRLVQQEGRTLIHPFDDPYVIAGQGTIGMEVLKQMTGKKLDAIFVCCGGGGMLAGIAAYVKRVRPGVMVIGVEAEDAAGMTASIRAGRLTSLESVGMFADGAAVKTVGQETFRICNELVDDMVTVSTDEICAAIKDGFMDTRCVLEPAGALAIAGVKKWVGLTNLRDQTFVAIASGANMDFDRLRFVSERADASETMLSVRIPERPGAFRALIGHVFPRNVTEFSYRLGDPQNASVYLSFQARGATSEEKRTDAESAMAAMRADGLLVTDLRDNELAKSHLRHLGGGRANVDPPERLIRFEFPERPGALSHFLASLDTAGAGWNVSLFQYRNHGADIGRVLAGLQVPLEQLPELQTWLA---RLGYEHHLEDGNEVARHFL 569          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|219127023|ref|XP_002183744.1| (l-threonine ammonia-lyase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404981|gb|EEC44926.1| l-threonine ammonia-lyase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 314/506 (62.06%), Postives = 380/506 (75.10%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            YL++ILNARVY++AIE+ LQ A  +S  + N VL KRED QPVFSFK+RGAYNK+       L++GVV CSAGNHAQGVALSA     +AVIVMPLATP IKVNAV+  GGP+V V+L G NYDEA+ EA+RL  E+G+T +HPFDDP VIAGQGTIGMEILK    +PLDAIFVC GGGG+L+G+AAYVK VRP+VKVIGVEA DAAGMT SL+ G +V LD VGLFADGAAVR VG ETFR+C  LVD+M+TV TDEIC AIK  + D R V+EPAGALA+AG +KY    +  G+T+VAI SGANMDFDRLRFV+ER+D +E  L+V I E+PGSFRQLYS I+PRNVTEFSYRF +   A V+ISFQ +     E D + ++  +    F+ +DLS NE+AK H R+LAGGR+  V +E+++RF+FPE PGAL  FL  L+ GWNVSLFHYRN G D GRVLVG+QV   +  +   +L     LGY +  ET NPVY  FL
Sbjct:   90 YLSKILNARVYDVAIESELQHAKNLSAHLKNTVLLKREDTQPVFSFKIRGAYNKMSHLSRDLLDKGVVCCSAGNHAQGVALSAKMLGCRAVIVMPLATPAIKVNAVRIHGGPSVEVRLFGNNYDEAATEAKRLQLEDGMTFVHPFDDPLVIAGQGTIGMEILKECVSRPLDAIFVCCGGGGMLAGIAAYVKRVRPTVKVIGVEAADAAGMTASLREGKLVTLDSVGLFADGAAVRRVGDETFRVCKTLVDDMITVDTDEICNAIKLTYNDARVVLEPAGALAVAGMRKYVHTNELSGQTLVAITSGANMDFDRLRFVAERADGSERTLAVTIPEKPGSFRQLYSLIWPRNVTEFSYRFETDGDAHVLISFQPVMNI--ENDFEGIMHELGENGFDCLDLSHNELAKVHVRHLAGGRSI-VNNERVFRFDFPESPGALQRFLLSLDMGWNVSLFHYRNHGDDFGRVLVGIQVTESDDKKLKSFLG---NLGYRYEEETNNPVYRAFL 589          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|1173955699|gb|OQS02629.1| (l-threonine ammonia-lyase [Thraustotheca clavata])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 311/511 (60.86%), Postives = 383/511 (74.95%), Query Frame = 0
Query:   47 DYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNV--TEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKG--WNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            DY    + +R Y+ A++TPL  A  MS+ + N +L KRED+QPVFSFK+RGAYNK+   P +  E GVV CSAGNHAQGVALSA +  I+A IVMPLATPQIKV AV++ GG  V V LHG N+DEA+ EA+R+ + EG TMI PFDDP VIAGQGTIGMEIL+ T GQPLDA+F+  GGGG+L+GVA +VK  RPSVKVIGVEA DAAGMT SL AG  V LD+VGLFADGAAV++VG ETFR+C   VDEMVTVTTD+ICAAIK GF DTR V+EPAGALAIAG  +Y   ++ +G T   + SGANMDF RLRFVSER+D TETL+SV+I+ERPGSF +L+S +    V  TEFSYR++  D A + +SFQ +   SRE+   +V+  +  + +EV+DL  NE+AK H R+LAGG++  V  E+LYRFEF ++PGAL AFLT +N G  WN+SLFHYRN G DIGRVLVG QVPP++  +FH++LT    + Y    ET NPVY QFL
Sbjct:  488 DYCRMTIESRAYDAAVQTPLIKAHSMSEALKNTILLKREDMQPVFSFKIRGAYNKMAHLPPSKRETGVVCCSAGNHAQGVALSAKKLGIQATIVMPLATPQIKVKAVQQHGGDNVTVILHGNNFDEAAAEAKRIEQVEGRTMILPFDDPHVIAGQGTIGMEILQQTTGQPLDAVFLACGGGGMLAGVANWVKHFRPSVKVIGVEAADAAGMTASLAAGKRVELDQVGLFADGAAVKLVGEETFRICQQHVDEMVTVTTDDICAAIKTGFNDTRVVLEPAGALAIAGVDRYIKEKRIQGGTYCVVTSGANMDFTRLRFVSERADGTETLISVKIDERPGSFERLHSYMDAEGVRITEFSYRYSEVDNAHICMSFQSI---SREQ-SDRVVARLNQVGYEVMDLRDNELAKVHTRHLAGGKSVVVGDERLYRFEFADKPGALKAFLTHMNGGSTWNISLFHYRNHGADIGRVLVGFQVPPQDEARFHEYLTA---VSYHHVDETNNPVYKQFL 991          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|1072234058|gb|OEU18788.1| (threonine ammonia-lyase, biosynthetic [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0
Identity = 315/507 (62.13%), Postives = 378/507 (74.56%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTT-LPQLGYVWYAETKNPVYFQFL 553
            YL RILNARVYE AIET LQ A  +S  + N V  KRED QPVFSFK+RGAYNK+      +L  GVVACSAGNHAQGVALS+     +AVIVMPLATP IKVNAV+  GG TV V+L G NYDEA+ EA+RL  EEG+TMIHPFDDP VIAGQGTIG+EILK+   +PLD IFVC GGGG+L+G+AAYVK VRPSVKVIGVEA+DAAGMT SL+ G VV LD VGLFADGAAV+ VG ETFR+C+ LVDEMVTV+TD+IC AIK  + D R V+EPAGAL +AG +KY A  +  G+T+VAI SGAN+DFDRLRFVS+R+D +E  L V I E PGSFR LYS I+PRNVTEFSYR++    A V+ISFQ +     + D + ++ NI+   F+ +D+S +E+ K H R +AGGR+  V +E+L+RF+FPE PGAL  FL  L+  WNVSLFHYRN G D GRVLVGLQVP  +     + LT  L  L Y +  ET NP+Y +FL
Sbjct:   17 YLNRILNARVYEAAIETELQHAKNLSNDLKNTVFLKREDTQPVFSFKVRGAYNKMAHLSQDELSNGVVACSAGNHAQGVALSSKMLGCRAVIVMPLATPIIKVNAVRTHGGQTVEVRLFGNNYDEAATEAKRLMIEEGMTMIHPFDDPHVIAGQGTIGLEILKSCVSRPLDIIFVCCGGGGMLAGIAAYVKRVRPSVKVIGVEADDAAGMTESLKQGKVVTLDNVGLFADGAAVKTVGEETFRVCNKLVDEMVTVSTDQICDAIKLTYNDARVVLEPAGALGVAGMKKYVAENKISGQTLVAITSGANLDFDRLRFVSDRADGSERTLVVTIPETPGSFRALYSLIWPRNVTEFSYRYDDDGDAHVLISFQPVMNI--DNDFEGIMANIQENGFKCIDVSQDELTKVHIRNMAGGRSS-VPNERLFRFDFPEAPGALQRFLLSLDIEWNVSLFHYRNHGDDFGRVLVGLQVP--DCVDTDNRLTRFLDTLHYDYEEETNNPIYHKFL 518          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|224008394|ref|XP_002293156.1| (threonine dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220971282|gb|EED89617.1| threonine dehydratase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 309/508 (60.83%), Postives = 369/508 (72.64%), Query Frame = 0
Query:   48 YLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLE-RGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQ-LGYVWYAETKNPVYFQFL 553
            YL +ILNA VY++A+ET LQ A  +S+ ++N +  KRED QPVFSFK+RGAYNK+ S P + L+ RGVVACSAGNHAQGVALSA R   +AVI MPLATP IKVNAV+  GG TV V+L G NYDEA+ EA+RL REEGL MIHPFDD  VIAGQGTI +EILK     P+DAIFVC GGGG+L+G+A YVK VRP++KV GVEA DAAGMT SL AG VV L  VGLFADGAAV+ +G ETFRLCS  VD MVTV TD+IC AIK  + D R ++EPAGALA+AG +K+       G T VAI SGANMDF+RLR VSER+D +E  L V I E PGSFR +YS I+PRNVTEFSYRF S   A+V +SFQ +A    E D + V+E++   DF   D+S NE+AK H R+LAGGR+    HE+L+RF FPE PGAL  FL  LN  WN+SLFHYRN G D GRVLVG+Q   ++ G   + +    Q LGY +  ET NP Y +FL
Sbjct:    7 YLGKILNANVYDVAVETELQHAKNLSQLLNNTIFLKREDTQPVFSFKIRGAYNKMASLPPSILKSRGVVACSAGNHAQGVALSAKRLGCRAVICMPLATPSIKVNAVRAHGGETVEVRLFGNNYDEAAAEAKRLEREEGLAMIHPFDDEHVIAGQGTIALEILKKCVSHPVDAIFVCCGGGGMLAGIAVYVKQVRPNIKVYGVEAADAAGMTASLAAGEVVTLPSVGLFADGAAVKTIGTETFRLCSQYVDGMVTVDTDQICNAIKLAYNDARVILEPAGALAVAGLKKHVEENHITGSTFVAITSGANMDFNRLRVVSERADDSERTLQVTIPETPGSFRAMYSKIWPRNVTEFSYRFESNQEANVFVSFQPLAHV--ENDFEAVMEDLVGDDFACTDISHNELAKTHIRHLAGGRSG-CDHERLFRFHFPEAPGALQRFLEALNMKWNISLFHYRNYGDDFGRVLVGIQ---QQQGDKCEGMNKFLQDLGYQYIEETHNPSYSKFL 508          
BLAST of EWM28104.1 vs. NCBI_GenBank
Match: gi|1173946483|gb|OQR95010.1| (l-threonine ammonia-lyase [Achlya hypogyna])

HSP 1 Score: 602.053 bits (1551), Expect = 0.000e+0
Identity = 311/537 (57.91%), Postives = 382/537 (71.14%), Query Frame = 0
Query:   21 RAAASSSGASVVSSANSMTDEFPDHTDYLARILNARVYELAIETPLQPAPCMSKTIHNNVLFKREDLQPVFSFKLRGAYNKIVSTPAADLERGVVACSAGNHAQGVALSASRKNIKAVIVMPLATPQIKVNAVKRFGGPTVVVKLHGKNYDEASEEAQRLSREEGLTMIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAAIKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFRQLYSGIFPRNV--TEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKG--WNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQFL 553
            RA + + G+S+  + +  TD      DY    + +R Y++A+ TPL  A  MS  + N +  KRED+QPVFSFK+RGAYNK+     A  + GVV CSAGNHAQGVALSA    I A IVMPLATP IKV AV++ GG  + + LHG N+DEA+ EA+R+   EG TMI PFDDP VIAGQGTIGMEIL+ T GQPLDAIFVC GGGG+L+GVA +VK  RPSVKVIGVEA DAAGMT SL AG  V LD+VGLFADGAAV++VG+ETFR+C   VDEMVTVTTD+ICAAIK GF DTR V+EPAGALAIAG  +Y   ++  G    AI SGANMDF RLRFVSER+D +ETL+SV+I+ERPG+F +L+  +    V  TEFSYR++  D A + +SFQ     SR++    VLE +    + V DL  NE+AK H R+LAGG++  V  E+LYRFEF ++PGAL AFLT +N G  +N+SLFHYRN G DIGRVLVG QVPP +  +F D+L     + Y    ET+NPVY QFL
Sbjct:   12 RAWSRALGSSLRYTPSLSTD------DYCRMTIESRAYDIAVHTPLMKAHAMSAALRNTIYLKREDMQPVFSFKIRGAYNKMAHLSQAKRDAGVVCCSAGNHAQGVALSAKTLGIHATIVMPLATPDIKVKAVQQHGGSNIKIILHGNNFDEAAAEAKRIEANEGRTMILPFDDPLVIAGQGTIGMEILQQTTGQPLDAIFVCCGGGGMLAGVANWVKHFRPSVKVIGVEAADAAGMTASLAAGKRVELDQVGLFADGAAVKLVGQETFRICQEHVDEMVTVTTDDICAAIKTGFNDTRVVLEPAGALAIAGVDRYIKEKRIEGGHFCAITSGANMDFTRLRFVSERADGSETLISVKIDERPGAFERLHRYMDAEGVRITEFSYRYSEKDNAHICMSFQSQ---SRDQ-ADSVLERLGAAGYAVEDLRDNELAKVHTRHLAGGKSVIVGDERLYRFEFADKPGALKAFLTHMNGGMTFNISLFHYRNHGADIGRVLVGFQVPPADDARFRDYLKA---VAYHHVEETENPVYKQFL 535          
The following BLAST results are available for this feature:
BLAST of EWM28104.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110448|gb|EWM28104.1|0.000e+0100.00threonine dehydratase [Nannochloropsis gaditana][more]
gi|299116041|emb|CBN74457.1|0.000e+066.40Threonine ammonia-lyase [Ectocarpus siliculosus][more]
gi|1210522232|dbj|GAX18994.1|0.000e+062.45threonine dehydratase [Fistulifera solaris][more]
gi|1210525878|dbj|GAX15484.1|0.000e+062.45threonine dehydratase [Fistulifera solaris][more]
gi|922861392|gb|KOO29149.1|0.000e+058.70threonine dehydratase [Chrysochromulina sp. CCMP29... [more]
gi|219127023|ref|XP_002183744.1|0.000e+062.06l-threonine ammonia-lyase [Phaeodactylum tricornut... [more]
gi|1173955699|gb|OQS02629.1|0.000e+060.86l-threonine ammonia-lyase [Thraustotheca clavata][more]
gi|1072234058|gb|OEU18788.1|0.000e+062.13threonine ammonia-lyase, biosynthetic [Fragilariop... [more]
gi|224008394|ref|XP_002293156.1|0.000e+060.83threonine dehydratase [Thalassiosira pseudonana CC... [more]
gi|1173946483|gb|OQR95010.1|0.000e+057.91l-threonine ammonia-lyase [Achlya hypogyna][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2555rna2555Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications