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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g178.9168.mrna |
| Orig protein id | gnl|cribi|Naga_100004g178.9168 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:604826..606608 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2534 ID=rna2534|Name=rna2534|organism=Nannochloropsis gaditana|type=mRNA|length=2495bp
CATACGTGTCAATTACAGGGCTGTGGCTCACACTTCAGCGTCCTTGCCCG
CCCTGTTCAGCTGCTTGTCTCCGTTTCTCACTGGATTCCTAGCTTTTGTG
ATATTGGGCGAGAGGGTCGGCTCTATAAGCGATATCATTGGCCTACTTTT
AAATCTGGGGGGGCTTATGTCCGTTATATATTCCAAGATGCGTTTAGAAA
AACCCATCCCTGTCGTTGGAATGGCGAATCATGTGGTGCATGGTGATAGA
GTTGATGGGATCAACTCCTCACCAGATACTTATTTGACGGAAGCCAAAGA
GCCAGAGCGTAAGGAGAGCCATGATGTGACCAAACCTATGGTTCCAAACG
GTATTTTTTTGCGGCCTGGGACGCCAAGCGCATTTTGAAAAAGACACTCA
AAAAGCAGAATCCATGTAGATAAAGATGTCACTTTATCGTCGTCCCTTAC
AAAAGTATGTGTCACTCTTTTGCGAGCAGACAACCAAAAAAATTGGAAAT
GAGGGAGAATGTGGTTTCCGAAATGTTTAAGGAGTTTTTTTCTTTTTTTT
AAAAAAATTCTTTCTCTTTCATTATTTTTTGTTGTTATTTGTGAAAAAGT
TGTAGCTCATTCTATTCATGACATTCCCGTAGATTACATTTTGTGTGAAA
CGTGGATGTGTATTTAAATTCCTGCCCGGAACGTAGCGAGTCCGCGGCAG
CAGAAGTTGAACCATGGCATGAGAGCCGACGAGGGTCGGTGCCTTCGGAG
TCAAGCTGGTCAGGAGGCGGCCCCTTAATGTCATGATGATCAATGCTGGG
TCGTGGTCACTGCATACATCCTAAGCAAGTTTTCCAAAGAGGAGAATGGC
GGGGAGCTTCAAGTGCGACCGAAGGAGGGTGTGAGGAGTGGCTGAGTGCA
GAGGGGAGGGGAGTTGGGTTACTTGTACTACATATAAAGCCCGCAATGGA
AACCGCTTGAAAACAAGAAGAAATACCTTGAACAGCGTCAACTTCCAAAG
TGATATATCAGGCCCTTTCTTTTCTCACATGTTTGACAAGGAATACAACA
AATCGACTCCAAGTTTTGTGGGCAGTACCGTCGAAAGAGTGGAATCAAGC
GGGGCTTGACGCTGTGAAGGCCATTTGAAGGGAAAAAAAAAAAGGTTTTT
CGCATCTCACTGCCTTTTTTGGGGCGAACAAGATATCGACAACGTGCAAT
CGCAAAGCGCGTGTGGAGTGTTCGAAGAGTGGAATGCAAGGCACCGATCC
GATCGAGTACCTTGCCAATTGCCATTTAGGGTCATTAAAATGGCTTCTCG
AGCCCAATAGAAGTCGGTCTGCGCCGCGACATTCTCAACCTACACCCTCA
AGACATTGTCTAGCCGGGCAATGCACTTGTTGCGCGATGCAGGTCTGTAT
ATTGGGAAACATTGCAAACTTCTTGAATTCGCAAGAGCTTTCTGTTTTGG
CGTGTGCCTCCGCCCAATTAGCCAGAGGCGTGTACAGAAGGGAAGGTGTC
ACACTATGCAACAAGGGCTTTCTCTTCCCAGCATTTAAGTCGATTGAGGA
CATAGATGGAAATCCAAGCAAGGAAGCAAGTAGTCGGGGCAAAATGTACG
CAAAATACGTCCCGCGACCGCTACGAAATCAGAGTGACGGACACTCATGG
TATTACCTGGATCTCGCAAGACCTGAGCGTGTGGCGCAAGTCAATGCGGG
CGCGAGCATGGGAGAAAAAAGCAGCATGGACCAGGGCCGCGCTGAGAGAA
TGTCCGGGAATATAGGAGGGCTTGGTTCTCCCCATCTCGCGGATTGCCTG
GACAGAAAGCGACGTTTTGGGGTCGCAGACTTTAATCGTCGCGGGAATGG
AAAGCTGCGAAAAAGACAAATGTGTCGAACAATTGTAGTGCTGCTGGTCT
TGGTCACCCTTCTCGCCGGATTCGCTCTGGTCGATAGGGAGGGAGGCGAG
CGGCCACCTCCTCGAGCGTCAATCGGTGCGGCAGCCTTCTGCCTCATGCT
AGCTCTTCTTTGTCTCATGGTCGGACTGTGCTTGGGATGCGAGTACTTGC
ATGAACGAGAGCTGACGACCAGGACGCGGGCCACGGGCATCGCAGAGAGG
AGCATCCCGCAGAGCCCAGGCGTTGACCGGGAGTGCGGGGCCGGGGAGGC
TCAAGGTCTGCTCCTAGCGAAAGGGCACAAGAGCATGTATGGGACTTCCC
TCGTTCAGCAAGAGGTCATCCTTACTCTCTCATGACACAGAGAAGCGTAA
CAGACGGCTTATTCCCAAGCGCCCACAGAGGACGGAGCCCGATTCACGGA
CCTCAGGCTGCACGCATCGGAGAAGGCTGAATGATATCATGATACTTAAG
GGTGGCTTAAGGAAATGTGATAACTTTCCAACAAGAGATCGTCTAGGTGA
CATTTCAATTTTCATTAATTTAAATTCTAAGTGGGCGTGTTTCCAGACGC
ATGGTTTACAAGCGGTAGTGTCGCCTGTATTGAAGGGAAATGACG back to topprotein sequence of rna2534 >rna2534-protein ID=rna2534-protein|Name=rna2534|organism=Nannochloropsis gaditana|type=polypeptide|length=251bp
MRRHELLYVLCTVAVSTIQAFVLTPSALRSSIVNTPCRTTAPSRFVTTSS
SPWLVRQLTVGGEDPGAVTLQSTWQLVTNVGALVVGALVLAEVVQDWPRG
WVNRQLVEAGPSTLGPQAGRGLFAARNIPRDTVIGNFPGVVSSRASWLGR
KDSEEAALLARRYTWSLATGDVLDPTLSNGELPDTLIFFGGLLRIPTLLA
LVNEPRAGMDLNVVAVVSERDVAYVAERDIFAGEELMTDYGPAYDRRHYR
L back to topmRNA from alignment at CM002459.1:604826..606608- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2534 ID=rna2534|Name=rna2534|organism=Nannochloropsis gaditana|type=mRNA|length=1783bp|location=Sequence derived from alignment at CM002459.1:604826..606608- (Nannochloropsis gaditana)
GATTGTTTCTTAATTGGCCCACTACGAAGACAAATGCCTGTCTTGCCAGC
GTTCCATCACCGTCTCGTAGAAGTCTCTTGAGATCTGTCCAGCACGCTTT
TTCAAAATCCTCATTCCTTTGTTTCTCTGAACAAGCACTATTGCAACGGA
CAAGCATAGTTTCTGTACTTGTTGTTGCTTTTTTTATTAGCGAAGCCAAT
TTCAGCTCGTCTGCCCTGGAAGTCATCCCAACTTTGCCGTCCCCAGCCAC
CAAAATTGACGTCCTGTTCTGTTGGCGTTTGCGCTGACGTGGTTTCAAAT
GTGGAGCAAGGGAAGACGACATCGAGTCTATGCATGGACTGGAGAAGCGT
GTAAGAGTGCTGTCGTGAGTGTAAATATGCATCAAGTGGAACAATTTCTA
CTACGCGAGTCTCGGGAATCGCTGTAGAGCGTGACATGCCGTGACACCCG
AGCCCCCCTAAATCTGACGAGATCACTTGGCGTCTGTGTTCACCTTGTAA
CTCTCTTCAGTCCTTGTAAGGCATCTCAAAGCAGGGTCATGACACCATGT
AATCTGTACACCGTGTATCACGTATTTAATGTCCTCACGCTTAGAACCTC
CCCGCCCCTGGCTCCAACCTCCCCGGCCTCTTTTCCCCTGCGGCAACAAG
TCGTATTTGTTATATGCGTCGGCACGAGCTTCTCTACGTGCTTTGCACCG
TGGCTGTGTCTACGATCCAGGCCTTTGTGCTGACTCCCTCTGCGCTAAGA
AGTTCCATCGTGAATACTCCGTGTCGTACTACAGCTCCCTCGCGTTTCGT
AACTACTTCATCATCGCCATGGCTGGTTCGACAACTGACGGTAGGAGGAG
AAGACCCGGGTGCTGTTACTCTTCAAAGTACATGGCAGCTCGTTACAAAT
GTCGGGGCCTTAGTCGTAGGTGCGCTCGTCCTGGCGGAAGTTGTGCAGGA
TTGGCCCCGTGGTTGGGTCAACAGACAGCTCGTTGAGGCCGGTCCGTCCA
CCCTAGGGCCCCAGGCAGGCCGCGGTCTTTTCGCCGCTCGCAACATACCG
AGAGACACAGTTATTGGCAATTTTCCAGGGGTTGTCTCATCCCGAGCAAG
CTGGCTTGGGCGCAAAGATAGCGAGGAAGCTGCATTGTTGGCGCGACGCT
ACACATGGTCTCTGGCCACGGGGGACGTTTTGGACCCAACACTGAGCAAC
GGTGAGCTACCTGACACACTAATCTTCTTCGGAGGCTTGCTACGGATCCC
GACACTCCTTGCGTTGGTGAATGAGCCCCGCGCGGGCATGGATCTAAATG
TTGTGGCCGTGGTGAGTGAACGGGACGTCGCTTACGTGGCGGAGCGCGAC
ATCTTCGCAGGTAGGTCGAGGCGACAGAGGGGTGACTGGGCCATCTAGTC
ACTGTCACAAATGTGAGCTACATAGCTCATCCAAGCTCTGTGTCAGGCTC
AAAGACTTTGAACTCTCATAGCAACGTATCCGCACTGTCTTGCAGGAGAG
GAGCTGATGACTGACTACGGCCCTGCCTATGATCGGTTAGTCGTGGTGGA
AGATCGAACGATCATTCGGTGTCTTTGGCGTGTCCAACGAGATCTTTGGG
TGCTCACGCGTCATTTCCCTTCAATACAGGCGACACTACCGCTTGTAAAC
CATGCGTCTGGAAACACGCCCACTTAGAATTTAAATTAATGAAAATTGAA
ATGTCACCTAGACGATCTCTTGTTGGAAAGTTATCACATTTCCTTAAGCC
ACCCTTAAGTATCATGATATCATTCAGCCTTCT back to topCoding sequence (CDS) from alignment at CM002459.1:604826..606608- >rna2534 ID=rna2534|Name=rna2534|organism=Nannochloropsis gaditana|type=CDS|length=2268bp|location=Sequence derived from alignment at CM002459.1:604826..606608- (Nannochloropsis gaditana)
GCGACACTACCGCTTGTAAGAGAGGAGCTGATGACTGACTACGGCCCTGC
CTATGATCGATGCGTCGGCACGAGCTTCTCTACGTGCTTTGCACCGTGGC
TGTGTCTACGATCCAGGCCTTTGTGCTGACTCCCTCTGCGCTAAGAAGTT
CCATCGTGAATACTCCGTGTCGTACTACAGCTCCCTCGCGTTTCGTAACT
ACTTCATCATCGCCATGGCTGGTTCGACAACTGACGGTAGGAGGAGAAGA
CCCGGGTGCTGTTACTCTTCAAAGTACATGGCAGCTCGTTACAAATGTCG
GGGCCTTAGTCGTAGGTGCGCTCGTCCTGGCGGAAGTTGTGCAGGATTGG
CCCCGTGGTTGGGTCAACAGACAGCTCGTTGAGGCCGGTCCGTCCACCCT
AGGGCCCCAGGCAGGCCGCGGTCTTTTCGCCGCTCGCAACATACCGAGAG
ACACAGTTATTGGCAATTTTCCAGGGGTTGTCTCATCCCGAGCAAGCTGG
CTTGGGCGCAAAGATAGCGAGGAAGCTGCATTGTTGGCGCGACGCTACAC
ATGGTCTCTGGCCACGGGGGACGTTTTGGACCCAACACTGAGCAACGGTG
AGCTACCTGACACACTAATCTTCTTCGGAGGCTTGCTACGGATCCCGACA
CTCCTTGCGTTGGTGAATGAGCCCCGCGCGGGCATGGATCTAAATGTTGT
GGCCGTGGTGAGTGAACGGGACGTCGCTTACGTGGCGGAGCGCGACATCT
TCGCAGGCGACACTACCGCTTGTAAGAGAGGAGCTGATGACTGACTACGG
CCCTGCCTATGATCGATGCGTCGGCACGAGCTTCTCTACGTGCTTTGCAC
CGTGGCTGTGTCTACGATCCAGGCCTTTGTGCTGACTCCCTCTGCGCTAA
GAAGTTCCATCGTGAATACTCCGTGTCGTACTACAGCTCCCTCGCGTTTC
GTAACTACTTCATCATCGCCATGGCTGGTTCGACAACTGACGGTAGGAGG
AGAAGACCCGGGTGCTGTTACTCTTCAAAGTACATGGCAGCTCGTTACAA
ATGTCGGGGCCTTAGTCGTAGGTGCGCTCGTCCTGGCGGAAGTTGTGCAG
GATTGGCCCCGTGGTTGGGTCAACAGACAGCTCGTTGAGGCCGGTCCGTC
CACCCTAGGGCCCCAGGCAGGCCGCGGTCTTTTCGCCGCTCGCAACATAC
CGAGAGACACAGTTATTGGCAATTTTCCAGGGGTTGTCTCATCCCGAGCA
AGCTGGCTTGGGCGCAAAGATAGCGAGGAAGCTGCATTGTTGGCGCGACG
CTACACATGGTCTCTGGCCACGGGGGACGTTTTGGACCCAACACTGAGCA
ACGGTGAGCTACCTGACACACTAATCTTCTTCGGAGGCTTGCTACGGATC
CCGACACTCCTTGCGTTGGTGAATGAGCCCCGCGCGGGCATGGATCTAAA
TGTTGTGGCCGTGGTGAGTGAACGGGACGTCGCTTACGTGGCGGAGCGCG
ACATCTTCGCAGGCGACACTACCGCTTGTAAGAGAGGAGCTGATGACTGA
CTACGGCCCTGCCTATGATCGATGCGTCGGCACGAGCTTCTCTACGTGCT
TTGCACCGTGGCTGTGTCTACGATCCAGGCCTTTGTGCTGACTCCCTCTG
CGCTAAGAAGTTCCATCGTGAATACTCCGTGTCGTACTACAGCTCCCTCG
CGTTTCGTAACTACTTCATCATCGCCATGGCTGGTTCGACAACTGACGGT
AGGAGGAGAAGACCCGGGTGCTGTTACTCTTCAAAGTACATGGCAGCTCG
TTACAAATGTCGGGGCCTTAGTCGTAGGTGCGCTCGTCCTGGCGGAAGTT
GTGCAGGATTGGCCCCGTGGTTGGGTCAACAGACAGCTCGTTGAGGCCGG
TCCGTCCACCCTAGGGCCCCAGGCAGGCCGCGGTCTTTTCGCCGCTCGCA
ACATACCGAGAGACACAGTTATTGGCAATTTTCCAGGGGTTGTCTCATCC
CGAGCAAGCTGGCTTGGGCGCAAAGATAGCGAGGAAGCTGCATTGTTGGC
GCGACGCTACACATGGTCTCTGGCCACGGGGGACGTTTTGGACCCAACAC
TGAGCAACGGTGAGCTACCTGACACACTAATCTTCTTCGGAGGCTTGCTA
CGGATCCCGACACTCCTTGCGTTGGTGAATGAGCCCCGCGCGGGCATGGA
TCTAAATGTTGTGGCCGTGGTGAGTGAACGGGACGTCGCTTACGTGGCGG
AGCGCGACATCTTCGCAG back to top
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