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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g174.9238.mrna |
| Orig protein id | gnl|cribi|Naga_100004g174.9238 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:595847..596412 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2530 ID=rna2530|Name=rna2530|organism=Nannochloropsis gaditana|type=mRNA|length=1188bp
ATGGGTGATTTTGACGCATTACCTACATCTATCTTAAAAGCTTCCGACTC
CACCAAAAGAAGTCCGCATAAGACATCACTCAGCTATCAACCAACTCACA
GGAAGTTGATAATGCGAACATCGCGGCGGCTGGCGTCCTCTGTACTTGAT
TCATTGCCTTCAAATGGCAAGTTACCTCTAGGTGCAATCGAACTTTTCAA
GACGCGGCCATCAAGCTGGCGGACAGTCCCGATGGTTGTATGCGGCTCTT
TGATGGTGGTGGGCTCATTTGTTTGGGTACCTTTGGTTATTTGGCTGGGC
TGGAGGAAATGTAAAACTCGGAATCGACGCATTATTTACGTCCTGGTCCT
TTGCATCATATTGACGTTACCGACACGGCGGTGGGACGCCGTCATCATGA
ATGGATTGTGGAGCCGCTTTGTCGAGTACTTCTCAGTCGAAGTCGTTGGG
GACGACCCTCTGCCCACGAACCGCTCCGCATTATATGCCGTCATACCGCA
TGGTACATTCCCCTTCGGCGTGGGTGTGATCTCCCTAGGACCTCTGAACA
AGCTCTTCAGTAAGGTACGACCTGTCGTGGCATCTGCTGTCCTCCGTTTT
CCGGGCTTTGGGCAGTTGATTAGCTTTGCTGGCGGTATAGACGCAAAGGA
AGAAAGCGTGAGCAAGGCTATCAAGGACGGGTGCTCGGTGAGCATTTGTC
CTGGCGGCATCGCAGAGATGTTCTGGGGCTACCCCAAGGAAGGGTGTCTC
CCGCGGGAGGAGTACGCTTTTTTGCAGTCTCGGAAAGGCTTTATTCGCAT
GGCCATGAAGCATGGAGTGCCTGTGGTGCCCGTGTATTGCTTCGGAAATA
CCCACGCCATGCACAAGGCCAGAATGCCAAGAGCTCTGGAGGCTCTCTCT
CGACTCCTCAAGGCCTCGCTCATTGTTACCTGGGGCCGCTGGGGCTTGCC
CATCCCCTACCGCATCCCCCTGCTCTACGCCGTCGGCAAACCTCTTCATT
TGCTGCACGTGGAGAATCCTACTCCCCACCAGATCGAGGCTGCCCACTCG
GAGTTTTGCCGCGCGCTCTCCGATCTCTTCGACAGGTACAAGTTTTACTA
CGGCTGGGGCCACAAGACCTTGCGCATAAGAATTATGTCATGTAAAATAG
ACAAAGCAACCAGCTTGAAAGCACAGGGCCAAAACTGA back to topprotein sequence of rna2530 >rna2530-protein ID=rna2530-protein|Name=rna2530|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MRAHIDAILRYQWIKYNEASTFLCQNRSWIATQSLSIFLQKSNVIIDYLM
FILALSESSPDCDIKLEHIFAKATIYEICHLLDCQSKYDMSITDTKVCFS
PRSSILCNDGVEADVVHVPGGDGGRKSWFTRRAYINECTAPYKDYIFARL
Y back to topmRNA from alignment at CM002459.1:595847..596412+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2530 ID=rna2530|Name=rna2530|organism=Nannochloropsis gaditana|type=mRNA|length=566bp|location=Sequence derived from alignment at CM002459.1:595847..596412+ (Nannochloropsis gaditana)
CATGAGAATGGATGCTGAATCTATGGAGGCTGAGATCGACCCGCCGGCAA
CAACTTGAACCAAAAGGACGGCGTTGGTAGGAGTTCGTCCCGGGAGCCTT
TCGTAGCACAATGCGGGCGCATATTGACGCAATTTTACGATATCAGTGGA
TTAAATACAACGAAGCTTCGACCTTTCTTTGTCAGAATCGATCCTGGATT
GCGACTCAATCCTTGAGCATTTTTCTGCAAAAAAGCAACGTTATCATTGA
TTATCTGATGTTCATTCTTGCACTGTCAGAATCGAGCCCTGATTGCGATA
TAAAACTGGAGCACATTTTCGCTAAAGCCACCATTTATGAAATATGTCAT
CTACTTGATTGTCAATCTAAATACGATATGTCCATCACTGACACAAAGGT
CTGTTTTTCCCCTCGATCTTCCATCCTTTGTAACGATGGAGTTGAAGCTG
ATGTTGTTCATGTCCCCGGAGGGGATGGTGGCCGCAAGTCGTGGTTTACA
CGACGGGCATATATAAACGAGTGCACTGCGCCATACAAAGACTATATATT
CGCGCGTCTGTATTAA back to topCoding sequence (CDS) from alignment at CM002459.1:595847..596412+ >rna2530 ID=rna2530|Name=rna2530|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002459.1:595847..596412+ (Nannochloropsis gaditana)
ATGCGGGCGCATATTGACGCAATTTTACGATATCAGTGGATTAAATACAA
CGAAGCTTCGACCTTTCTTTGTCAGAATCGATCCTGGATTGCGACTCAAT
CCTTGAGCATTTTTCTGCAAAAAAGCAACGTTATCATTGATTATCTGATG
TTCATTCTTGCACTGTCAGAATCGAGCCCTGATTGCGATATAAAACTGGA
GCACATTTTCGCTAAAGCCACCATTTATGAAATATGTCATCTACTTGATT
GTCAATCTAAATACGATATGTCCATCACTGACACAAAGGTCTGTTTTTCC
CCTCGATCTTCCATCCTTTGTAACGATGGAGTTGAAGCTGATGTTGTTCA
TGTCCCCGGAGGGGATGGTGGCCGCAAGTCGTGGTTTACACGACGGGCAT
ATATAAACGAGTGCACTGCGCCATACAAAGACTATATATTCGCGCGTCTG
TATTAA back to top
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