EWM28307.1, cds2522 (CDS) Nannochloropsis gaditana

Overview
NameEWM28307.1
Unique Namecds2522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:595957..596412 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28307.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100004g174.9238.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:595957..596412 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28307.1 vs. NCBI_GenBank
Match: gi|585110652|gb|EWM28307.1| (hypothetical protein Naga_100004g174 [Nannochloropsis gaditana])

HSP 1 Score: 316.235 bits (809), Expect = 2.164e-109
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 
Query:    1 MRAHIDAILRYQWIKYNEASTFLCQNRSWIATQSLSIFLQKSNVIIDYLMFILALSESSPDCDIKLEHIFAKATIYEICHLLDCQSKYDMSITDTKVCFSPRSSILCNDGVEADVVHVPGGDGGRKSWFTRRAYINECTAPYKDYIFARLY 151
            MRAHIDAILRYQWIKYNEASTFLCQNRSWIATQSLSIFLQKSNVIIDYLMFILALSESSPDCDIKLEHIFAKATIYEICHLLDCQSKYDMSITDTKVCFSPRSSILCNDGVEADVVHVPGGDGGRKSWFTRRAYINECTAPYKDYIFARLY
Sbjct:    1 MRAHIDAILRYQWIKYNEASTFLCQNRSWIATQSLSIFLQKSNVIIDYLMFILALSESSPDCDIKLEHIFAKATIYEICHLLDCQSKYDMSITDTKVCFSPRSSILCNDGVEADVVHVPGGDGGRKSWFTRRAYINECTAPYKDYIFARLY 151
The following BLAST results are available for this feature:
BLAST of EWM28307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110652|gb|EWM28307.1|2.164e-109100.00hypothetical protein Naga_100004g174 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2530rna2530Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications