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Properties
Property Name | Value |
Product | lipoic acid synthetase |
Orig transcript id | gnl|cribi|Naga_100004g150.9100.mrna |
Orig protein id | gnl|cribi|Naga_100004g150.9100 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:539987..541795 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2506 ID=rna2506|Name=rna2506|organism=Nannochloropsis gaditana|type=mRNA|length=954bp ATGGTTGAAAGTAAACACACGTTGGCCGAGACAATACAGCCTTTCGCATG CGGCGGCCTAAGTGCCTGTTTCGCTAGTAGCATCATCCACCCAATCGATC TTGCCAAGGTTCGTCTGCAGCTCTTTGCCACCCTTAATCCAGGCGTAAAG CGCCCAAGTGCTGTGAGCGTGATTGTCAACCTTGTAAAGACCGATGGCAT TACGGCAGCGTATGCGGGCCTGAGCGCCTCGTTGATGCGACAAGCCATCT ACGGTACGGCACGAATCGGATTGCACAGAACATTTTCTGATAAACTGGAA AAAAGCACGGGCGGATCTATCCCATTCTGGATGAAGACTCTTAGTGGTAT GGCATCAGGAGCTATTGCTGTATGCATCGGAACGCCATTCGATGTGGCGT TGGTGCGCATGCAAGCAGATTCCATGAAGCCTCTCGAGCTGCGAAGAAAT TATAAAAATGTGTTTGACGCAATAGGTCGTATATTCACGGAGGAAGGGCC AATGCGACTCTATGCGGGCTTGGCGCCTAATGTGCTGCGTGGCATGTCCA TGAATGTAGGTATGCTAGCCTGCTACGACCAGGCGAAAGACGCCATCTCC GCGCACGTGACCAAAGACCCCGACCCCAAAAAGCCCTCTCTGCTCACCAA CCTGCTTTCCTCCGCCGTGGCTGGCTTTACGTCGGCTTTTTTCTCCTTAC CCTTTGATATGCTGAAGTCTCGTATGCAAGACATGAAGCCAAACGCCCAA GGTAAGATGCCGTACTCAGGACTCGCGGACTGCACCCTGACGATCTTCCG TCAAGAGGGCATCCTCGCTTTTTGGACGGGATTTCCCGCATACTACGGGC GCTGTGCGCCGCACGCCATGATTATTCTTCTGACAATCGAACAAGTGAAC AAGATTTATCGCTCTATCTTCCTTTCGCCCAAGCCCGCACCACTTGTCGC GTAG back to topprotein sequence of rna2506 >rna2506-protein ID=rna2506-protein|Name=rna2506|organism=Nannochloropsis gaditana|type=polypeptide|length=400bp MRALVRAPRISPAVKQSAYLAPALPTFWRIESIFTAYATKNLSSSPRLDR LREKLKEEDAAHAGTCPTHGALPDKEVPKATFPVARRRKRSEPKPEWLKA VPAEGENYLRLKNTVRKLKLATVCEEARCPNIGECWGGGKDGTATATIMI MGDTCTRGCSFCAVKTSRTPAPLDPLEPEHVARAIAEWGLDYVVLTSVDR DDLVDQGSEHFAKTVRGLKARKPTLLVECLTPDFRGQASLIERVALSGLD VYAHNLETVERLQRRVRDHRAGYSQSLFVLEHAKKRAPKLLTKTSLMLGV GERPEDVRATLRDLRTAGVDVVTFGQYLRPTKRHMPVQAYITPAQFQAWQ AEAEALNFKYVASGPLVRSSYKAGEFFLKGVLKQRLAEGGLGEQQNVAGM back to topmRNA from alignment at CM002459.1:539987..541795+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2506 ID=rna2506|Name=rna2506|organism=Nannochloropsis gaditana|type=mRNA|length=1809bp|location=Sequence derived from alignment at CM002459.1:539987..541795+ (Nannochloropsis gaditana) CTGCCTCCAATGCCGATGCTCACAGGCTCCACTGCGATCTCAAGAATCAG
GGGGCTGCCTCGCAAGGTGTTGCTTACTCGTAGAGTCTCTTCTTTCAAAA
GTCCCCGTCCTGGCCGGTAAAATGCGGGCTCTAGTGCGGGCCCCCCGCAT
ATCGCCTGCTGTGAAGCAGTCAGCATATTTAGCCCCTGCTCTTCCAACAT
TTTGGCGGATAGAAAGTATTTTCACGGCATATGCGACCAAAAAcctatcc
tcctccccccgccttgaccGGCTACGTgaaaaattgaaagaggaggatgc
tgCGCACGCTGGGACTTGTCCCACCCATGGTGCTTTGCCTGATAAGGAGG
TGCCTAAAGCCACCTTTCCCGTTGCACGACGTCGTAAGCGCTCGGAGCCG
AAACCAGGTACGTTCTTCaatgtggaggagatgctTTTGATTGAAAAGAC
TCTGACGTCATCCACGGTATTCCTCACTCGTTTTCTGGCAGAGTGGTTGA
AGGCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAACACGGTA
AGCAGGCGGGTTTGTGAGAATATTACCCACTTTTGGGCAAAAAACTCATG
GTGTCGTTCCTTTCTTGCAAAAAAAGGTACGAAAGCTGAAGTTGGCCACT
GTGTGCGAAGAGGCTCGCTGCCCGAACATCGGGGAGTGCTGGGGGGGTGG
CAAGGACGGCACGGCCACTGCGACCATCATGATAATGGGCGACACCTGCA
CGCGAGGCTGCAGCTTTTGTGCTGTAAAGACAAGTCGGACGCCGGCGCCG
TTGGGTGAGAAAAACGTAACTTGATCAACATCTATGTATAGTATGTATTG
CTCAGAAGCGGACCTCATTTTTCACACCCATTCGTTGATGGCAATAGATC
CATTGGAGCCAGAACATGTGGCCCGAGCCATCGCAGAATGGGGTCTGGAT
TATGTTGTGTTAACAAGGTAAGATAGCGGGTTTGCACTCGTGATGGACGA
GGGTCCTCATCCACGCACTCAGGCTCACTGGTTTTACGGACATCGCATTT
CATTAGTGTTGACCGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCG
CGAAAACAGTCAGGTAAGGACGAAGGTAGTCAAATCTGTGCGAGAATTTT
CGCTGTTCTTGCGCTCAACAGCTCATCGTAAGTAAAACAAACTCGCTTCA
GAGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTTTGACTCCC
GATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTGTCGGGTTT
GGATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCAGCGACGGG
TGCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCCTGGAGCAT
GCCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTCATgctggg
cgtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGACTTGCGCA
CAGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGCCCACGAAG
AGACACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTTCAGGCTTG
GCAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTCCGGGCCTC
TAGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGGGTGTCCTC
AAGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAACGTGGCAGG
GATGTAAAGAAAAGAATGGAAAGTGAATCAATTGTAGGCACTGGTTGCCG
AAGCGAATG back to topCoding sequence (CDS) from alignment at CM002459.1:539987..541795+ >rna2506 ID=rna2506|Name=rna2506|organism=Nannochloropsis gaditana|type=CDS|length=7218bp|location=Sequence derived from alignment at CM002459.1:539987..541795+ (Nannochloropsis gaditana) ATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCCTGCTGTGAAGCAGTC AGCATATTTAGCCCCTGCTCTTCCAACATTTTGGCGGATAGAAAGTATTT TCACGGCATATGCGACCAAAAAcctatcctcctccccccgccttgaccGG CTACGTgaaaaattgaaagaggaggatgctgCGCACGCTGGGACTTGTCC CACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTAAAGCCACCTTTCCCG TTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCAGAGTGGTTGAAGGCA GTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAACACGGTACGAAA GCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCTGCCCGAACATCGGGG AGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACTGCGACCATCATGATA ATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTGTGCTGTAAAGACAAG TCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAGAACATGTGGCCCGAG CCATCGCAGAATGGGGTCTGGATTATGTTGTGTTAACAAGTGTTGACCGA GATGATTTGGTAGATCAAGGATCAGAGCACTTCGCGAAAACAGTCAGAGG ATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTTTGACTCCCGATT TTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTGTCGGGTTTGGAT GTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCAGCGACGGGTGCG AGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCCTGGAGCATGCCA AAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTCATgctgggcgtg ggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGACTTGCGCACAGC CGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGCCCACGAAGAGAC ACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTTCAGGCTTGGCAA GCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTCCGGGCCTCTAGT CCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGGGTGTCCTCAAGC AGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAACGTGGCAGGGATG TAAATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCCTGCTGTGAAGCA GTCAGCATATTTAGCCCCTGCTCTTCCAACATTTTGGCGGATAGAAAGTA TTTTCACGGCATATGCGACCAAAAAcctatcctcctccccccgccttgac cGGCTACGTgaaaaattgaaagaggaggatgctgCGCACGCTGGGACTTG TCCCACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTAAAGCCACCTTTC CCGTTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCAGAGTGGTTGAAG GCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAACACGGTACG AAAGCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCTGCCCGAACATCG GGGAGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACTGCGACCATCATG ATAATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTGTGCTGTAAAGAC AAGTCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAGAACATGTGGCCC GAGCCATCGCAGAATGGGGTCTGGATTATGTTGTGTTAACAAGTGTTGAC CGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCGCGAAAACAGTCAG AGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTTTGACTCCCG ATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTGTCGGGTTTG GATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCAGCGACGGGT GCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCCTGGAGCATG CCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTCATgctgggc gtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGACTTGCGCAC AGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGCCCACGAAGA GACACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTTCAGGCTTGG CAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTCCGGGCCTCT AGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGGGTGTCCTCA AGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAACGTGGCAGGG ATGTAAATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCCTGCTGTGAA GCAGTCAGCATATTTAGCCCCTGCTCTTCCAACATTTTGGCGGATAGAAA GTATTTTCACGGCATATGCGACCAAAAAcctatcctcctccccccgcctt gaccGGCTACGTgaaaaattgaaagaggaggatgctgCGCACGCTGGGAC TTGTCCCACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTAAAGCCACCT TTCCCGTTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCAGAGTGGTTG AAGGCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAACACGGT ACGAAAGCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCTGCCCGAACA TCGGGGAGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACTGCGACCATC ATGATAATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTGTGCTGTAAA GACAAGTCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAGAACATGTGG CCCGAGCCATCGCAGAATGGGGTCTGGATTATGTTGTGTTAACAAGTGTT GACCGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCGCGAAAACAGT CAGAGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTTTGACTC CCGATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTGTCGGGT TTGGATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCAGCGACG GGTGCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCCTGGAGC ATGCCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTCATgctg ggcgtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGACTTGCG CACAGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGCCCACGA AGAGACACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTTCAGGCT TGGCAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTCCGGGCC TCTAGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGGGTGTCC TCAAGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAACGTGGCA GGGATGTAAATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCCTGCTGT GAAGCAGTCAGCATATTTAGCCCCTGCTCTTCCAACATTTTGGCGGATAG AAAGTATTTTCACGGCATATGCGACCAAAAAcctatcctcctccccccgc cttgaccGGCTACGTgaaaaattgaaagaggaggatgctgCGCACGCTGG GACTTGTCCCACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTAAAGCCA CCTTTCCCGTTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCAGAGTGG TTGAAGGCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAACAC GGTACGAAAGCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCTGCCCGA ACATCGGGGAGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACTGCGACC ATCATGATAATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTGTGCTGT AAAGACAAGTCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAGAACATG TGGCCCGAGCCATCGCAGAATGGGGTCTGGATTATGTTGTGTTAACAAGT GTTGACCGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCGCGAAAAC AGTCAGAGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTTTGA CTCCCGATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTGTCG GGTTTGGATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCAGCG ACGGGTGCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCCTGG AGCATGCCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTCATg ctgggcgtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGACTT GCGCACAGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGCCCA CGAAGAGACACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTTCAG GCTTGGCAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTCCGG GCCTCTAGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGGGTG TCCTCAAGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAACGTG GCAGGGATGTAAATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCCTGC TGTGAAGCAGTCAGCATATTTAGCCCCTGCTCTTCCAACATTTTGGCGGA TAGAAAGTATTTTCACGGCATATGCGACCAAAAAcctatcctcctccccc cgccttgaccGGCTACGTgaaaaattgaaagaggaggatgctgCGCACGC TGGGACTTGTCCCACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTAAAG CCACCTTTCCCGTTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCAGAG TGGTTGAAGGCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAAGAA CACGGTACGAAAGCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCTGCC CGAACATCGGGGAGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACTGCG ACCATCATGATAATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTGTGC TGTAAAGACAAGTCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAGAAC ATGTGGCCCGAGCCATCGCAGAATGGGGTCTGGATTATGTTGTGTTAACA AGTGTTGACCGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCGCGAA AACAGTCAGAGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAATGTT TGACTCCCGATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCCCTG TCGGGTTTGGATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACTCCA GCGACGGGTGCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCGTCC TGGAGCATGCCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCTCTC ATgctgggcgtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCGGGA CTTGCGCACAGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGAGGC CCACGAAGAGACACATGCCTGTGCAAGCCTACATCACACCAGCTCAATTT CAGGCTTGGCAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGCCTC CGGGCCTCTAGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCAAGG GTGTCCTCAAGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAGAAC GTGGCAGGGATGTAAATGCGGGCTCTAGTGCGGGCCCCCCGCATATCGCC TGCTGTGAAGCAGTCAGCATATTTAGCCCCTGCTCTTCCAACATTTTGGC GGATAGAAAGTATTTTCACGGCATATGCGACCAAAAAcctatcctcctcc ccccgccttgaccGGCTACGTgaaaaattgaaagaggaggatgctgCGCA CGCTGGGACTTGTCCCACCCATGGTGCTTTGCCTGATAAGGAGGTGCCTA AAGCCACCTTTCCCGTTGCACGACGTCGTAAGCGCTCGGAGCCGAAACCA GAGTGGTTGAAGGCAGTGCCCGCTGAAGGCGAGAATTATCTCCGATTGAA GAACACGGTACGAAAGCTGAAGTTGGCCACTGTGTGCGAAGAGGCTCGCT GCCCGAACATCGGGGAGTGCTGGGGGGGTGGCAAGGACGGCACGGCCACT GCGACCATCATGATAATGGGCGACACCTGCACGCGAGGCTGCAGCTTTTG TGCTGTAAAGACAAGTCGGACGCCGGCGCCGTTGGATCCATTGGAGCCAG AACATGTGGCCCGAGCCATCGCAGAATGGGGTCTGGATTATGTTGTGTTA ACAAGTGTTGACCGAGATGATTTGGTAGATCAAGGATCAGAGCACTTCGC GAAAACAGTCAGAGGATTAAAGGCACGGAAGCCGACGCTCCTCGTGGAAT GTTTGACTCCCGATTTTAGAGGCCAAGCAAGTCTCATCGAACGCGTAGCC CTGTCGGGTTTGGATGTGTACGCGCACAATCTTGAGACGGTGGAGCGACT CCAGCGACGGGTGCGAGACCACCGGGCCGGCTACTCGCAATCACTTTTCG TCCTGGAGCATGCCAAAAAGCGTGCACCGAAGCTTCTGACCAAAACATCT CTCATgctgggcgtgggcgagAGGCCGGAGGACGTGCGAGCCACGCTGCG GGACTTGCGCACAGCCGGCGTGGACGTGGTTACTTTCGGCCAGTATTTGA GGCCCACGAAGAGACACATGCCTGTGCAAGCCTACATCACACCAGCTCAA TTTCAGGCTTGGCAAGCGGAGGCAGAAGCTCTAAACTTCAAGTATGTGGC CTCCGGGCCTCTAGTCCGCTCTAGCTACAAGGCGGGGGAGTTTTTCCTCA AGGGTGTCCTCAAGCAGCGTTTAGCGGAAGGCGGGCTTGGGGAGCAACAG AACGTGGCAGGGATGTAA back to top
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