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Properties
| Property Name | Value |
|---|
| Product | Armadillo-like helical |
| Orig transcript id | gnl|cribi|Naga_100004g128.9229.mrna |
| Orig protein id | gnl|cribi|Naga_100004g128.9229 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:503377..506110 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2488 ID=rna2488|Name=rna2488|organism=Nannochloropsis gaditana|type=mRNA|length=3088bp
TGGCAGACCTTGCATGGTTGTGGAGCGGTTTTGGCAGCGGCAGCAGGTTT
TTTCGACTCCTTCAACAGCCGTGTCGGCCTACGACTATCACGATAAGGAG
AATAGGTGTATATTACCGTATTGAGGTTTTTCCCCTTTTGCTGGCTCGTT
CTTATCGCCTGGTGGAACAACAGGGGATGGCACGAGCGCGGAGTCTGTAT
GACATGGGCGTCTGGTCAATAACCACACGCGATGAATACGTCAGCTTTCT
TCAGTCAAAGAAAAATCTCTCAAAGGCCTCCATTCATAGCTATTGTTGGC
GGCTTGAAACGCTGTTTCGTGCCCTGATGACGGGCAAGCAAAAGCAAGGG
AACTTAGATCGAGGCCAAATAAGACAATTAATCGAACATAATTTGGAGGA
AGCAGAGCGCCTTGTGGCTCAAGACGACCGCCGTAGCCATTGGTGCTTGC
TTAAGGAATTTTTAGAGCTGCCATCTGCTCCTTTATGCGCGGGCGAGAGA
GGAAGAGATGAGCAGCTGTTGGACAGTGTACGGGGAGTGGGAGAGGACGA
GGTACGCTTTCCTGTCCATACTCTTGAGAACGAGGCAAATAAGCACAAAT
CCATTTCACCGAATTCTTTTCGAAAGAGAAATGGAATGATGGCAGCATCA
AAAGGGAAGCACGAAAATAAGGTTTGGGACATGGAGCTCAAGAAGGACTA
CAGGACTTGGCTGAGAGAGCGCGGCGTGAAAGAGAGGACTTGCGGGTCAT
ACTGCACATTCGTGCATAACCTTCTGCGAGCATTAGCAGATGCACGGAAG
CCAGTGCCATATAGGAGCCACCGGCAGCAAACCACCACGATACCTATCAC
ATTACTGCCTACATTCCCACAATCACGCTTGTCACACGAAGAAGGAAAAG
AAGAAAGAAAACGAGAACAACAGGAAGAGCCCTCTGTATTAGCCATGCAA
GACCAGGAGCACCATCAACAGCAAATATCCTATCAGCAGCCTCGTGCTGG
GCAGCGTGAATGTCTACATGAGGGGCTACAAAGCGGTAACGCCATTTTAT
TGCTTGCTTCTCATGAAGACTCGGCAATTGGGGATGCATATTGTTATCGC
GGCGACAGAAGTGGACAGGAGGCTTCCGAAGACAATTTAAGAGTGGCAGA
AGACAACGAAGTAGTCGCAATGGAGGGCGGTGAAGCGGGGATTGTTGCGC
CCCGGCGGGAGGGATTAAACAGAGGGGAGCTGATCGAGCTACTGGATGAG
CAACAAGAAGAGGCGCAACGCATTGTTCGTCAGTCTAAGAAAAACCGCTA
TCTACGGTCATTTCGAGAATTTTTGGGCATGAGTAACCATGACGATCACA
TCGTCAAAAATTCTAGGCAGTGGACAGATCGAGTAGGAGGAGCTTATAAA
AAGTGGATCGGAGCTGGGGGTGCGAATTGTCCACATGCCCGCACTCGAGG
TTACGTTGGTGCAGCTCGAAGTATTCTGCGGGTCATAAAACGGAAAGGAT
GGGTCCAAGAGGCGTTCGGAGGGCCTCCGCTCACCAGCGCTGATATTTGC
TTGGCCATTGAAGCCCATAAAGAGGAACTGCAACAGATTTGTGACAAGGC
AGATGATGAATGCCTACAAGCATTTTGCCGTTATTTGCGGCGACCGGAAA
ATAAGGGAGATGGCGAAGAAGAGGAAGAGAAGGACTTCCATTCTTCTCCG
GCAGTCTCATCGCTTGGGATAGGAGCCGAGGACGATGAGGCTGCTGAAGA
TATGGGAGATCATAAAATTGGTACTAATCCCCCTACTGCAGTCAAGGGAC
TCCATGAACTGACATCGACGAAGGCATGTATTCATCGTCCTCTGAAGTCA
GACGCGGGCATCGGGCACATGAATCGTGTTGTTCAATCTTCAGAACACCC
CGCAAGATGCGGGGCTGAAGAGGAGACTGTCGATAATCAGCAGCACGAAT
GGCCGATTTTTAATTCAGTGGGTCACAAAAGAAAGCGACCGGATACAACC
AGGGAGCAAGGGATGGAACACCGTATCAGATCACTAACACTCGACCTAGA
ATGTAAGACACGAGAACGCAACGCGGCACTCGCGCGCATACATGCGCTAG
AGCTAGAGATACAGCATTTGCGAGATCGCTTTTTGAGTACATCAACTCCG
CCTGTCTCGGCTGTACAAGAAGGACCTACCGAATGTCAGCAACAACATAC
ACGTGGTGTGGAGATGATTTTAAACCATCCCGGGGTCACAGAACAGGAAA
ATATAGGCGCACCGGGAGCTGCAATCACACACAGTGTACCAGGCCATACT
TGTGGAGAACGTGAGGGAGGCATTTGTGCAGATGATAGAGTGGTAGAAAC
GAACGCAAAGGATGAAGCTGTGTCCTTCAGGAACAAGATGGGACGAGAAG
GTGAGAGAGCAGAGGGTGATCCCGGCTTTTTGTTGCTTGAAGCTGATGCA
CATTCTAATTGGCAACGTCGAGACCAGTATGATCAGCTTCAGCGCCGACA
GTCAGTTGCGCTACCACGCGCTGGGGTTGACTTGACCGATGGAAAACCCC
AGGAAGAGGACAAGAGGCAGCGCTGCGTCTTCCGACACCACGTTCAGCAC
ATCGAAGTACATGATCAACGGAACGCTTGCGACCATCAGGACATGCACCT
AGATGATGGAGAGGATCAGGACCATCATTTACGCATCGTGGGAGAACGAG
AAACGGAAAATCTTCAGCATCTTCATGACGCTTCATTTGCATGCTCCCTC
GGCCTTCGTGAGATGGGAGAAGGGAAAGGAGATGGGGTGGAGAGCCGGGA
CTGTGTGGGTCATAATTCTCGCATGCACACCATTGCCACGCTGGGTCTTG
CATCCGACATTACGGAAAGGGCAGGTGTGGAAGAAAATCACACCATTCGT
CAGGGATGGTAGAATGCCCATGAAATCTAGAGCAGTCGTACACAGATATG
ACACGCGATAAGTTTGAAGGATCATCGCGAATCAAAGTAGGCCCACGCAC
ATTGTTCTGTCGAAAATTAGAGAATATTTTTCTGACGTTGTGCGCTAAGT
ACGATAAAGAATCAAGAGTCAAAGCATAAGTGTTATAA back to topprotein sequence of rna2488 >rna2488-protein ID=rna2488-protein|Name=rna2488|organism=Nannochloropsis gaditana|type=polypeptide|length=716bp
MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTD
VDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVET
VIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANI
TRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRR
SLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKV
IDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAE
LLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVAR
YVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILR
GILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDE
SWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQ
LRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPW
EVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSA
DRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHA
AMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDG
GLIPSLLLSQPEVVSI back to topmRNA from alignment at CM002459.1:503377..506110- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2488 ID=rna2488|Name=rna2488|organism=Nannochloropsis gaditana|type=mRNA|length=2734bp|location=Sequence derived from alignment at CM002459.1:503377..506110- (Nannochloropsis gaditana)
CATCCTCTAGCGCCCCGCCGCGTCGCTCATGTTCGTAAGCGCCTTACACG
CCATGTCCTAGCCTGCCTCGGCTCTTTGCTAGCCGAGCTCAGCAGGACGT
CGCATGACTGTCGCGTCGACTTGTCGGTTCATTTGTTTTTCCTCACCGGT
GCGCTTATTAACGATTAATGTCGCGATGATGCCGTTGCTGTCATGATCTG
ATAAGTGATGCGGAACCACGCAGGTCTTCGGTACTTTACGCGTCTTTTCA
GTGCCCAAGCAAAAGCTCTGAGTCGGAAAAAGTCACATGCTCAAGGAAGT
TAAAAAATGGAGTTGACCTTTGAATTATCTCTTTCCAGAATTCCTCCCCC
CCCCGACAAAAGATAGGAAAAGATGGACTTTTCGTCGTCCTTGAAAGCCG
CAAGCTGCCTGGTAAAGCGGCTTCGACAAGAAACCACGGGTTCAGAGCTG
TCGACCCTGCTGCCCGTCGCTCAACTGTTATCATCCAAACTTATAGCGAA
ACCAAATTTTGTTTTGACGGACGTGGACGAACCTCTGCGGATCTTAATGA
CTTTGGGACAGGAGGCACGGTGGGAATGCTTGTGCGTGGCATTACTGGTC
TTCAACGACGCCATAGCACACACGGCTCCTGCCCCTGCCGTCTCGCCAGT
GCTCCGCAATGCAGTTGAGACGGTGATCGCACTTCATTTGGAGCATGATG
AGCCCAGGGTGAGGCGCCTGGTCGCCAAGACGCTCGGTTTGCTCTGCACC
CTCCCATCCGTGGGGACGGACGCCTATACGCGCTTTGCTGGGCAATTGTG
GGCCAGTGTGGATGCGAATATCACGCGGCGTATTACCGAGACGCGGCGGG
CAAAGCTGGGTGTAACAAAAAACATTGTTATGGACGATGTAAGCGGCTGG
CGTTCACTGGAAACCTCTCTTATGGCTTTGCGTGAGGTGGTTGAAGCTTG
TGGGCCTGAACTGATTCGGCGTAGTTTGCTCACTCCGGAATGGCTCAACA
AGACGGTTTTTACAGCAGCTGAGCACTCAAATCGTTATGTCAGAGAGGCG
GCTATGGACATGGCTCGGGTGGTGGTCGATCGTTGTGTATGTATCAGCGA
CAGCGCTTCTTGTGGGAAAGTCATAGATTTTAATAGGCTGGCTGCTGTCG
TAGCAGGTGGCTTGGCAGATGCCTGGCCGCAAGTAGTGTATGCGGCTGTC
ATTGCGACTCGTAGTCTTCTGTTAACGGCTACAAACCATGTTGGTGTGGA
TGCCGAAGATCTTTTCGCCGAGCTCCTTCCTCCACTTTGTCAGTGCCGCT
ACTATACACCTGAGGGTGTTCAGGTACAAGCTCAGGAGACCTGGACTCAA
TTGTTTGCAGCCGCAAACAAAAGGAAGGATGACGCAGGCAGCGCTGGAAG
CGGGCGGGAGGCTGTCGCGCGATATGTGAAGGAAATGGTTGATTGCCATT
GTCGGGCACTTCAGCATGGACGCAGCCATTTCACACAGGTCGCCGCGTGT
TATGCCCTGAAGGAGCTAATGGAAAAGATCGATGAAAAGGTAACTTCACC
TTTCGCCAATCAAATATTGCGGGGGATCCTGCCCTGTTTACGGGCTTCGC
ACTGGGAGCTTCGCTCGGCAGGATACGTCGCCTTTGCTCAACTTTCACAA
AAATTTCCCGTGATTGTCATGTCACGACGAGAAGATGCTGTTAACGTCTG
TTTTGTTGGATTAGAAGATGAATCGTGGTCCATTCGCGAAGAGTCTGCAT
GGGCACTAGCCGCCATGACTCGATATGGGGAAAAAACAAAAATGCAGCAA
TGCCTTATCACCCGTCTTGAAGCCACACTGGATGCCGCTCGCCGTCAACC
TGTGGAGACCGAAGAAGAGCAGCTGCGACGCTTCAATGATGCCCAGGCTC
ACACGGGCGGGCCTGTATTCGGTTGTTGTGGAGGCCTCTTACATCCTCGT
GCAACTCCGTCGGGGGTCAATTTGCAGACCGACGTAGATATGTCTGCGTA
TCGTTACGCAGCTCAGCCCTGGGAAGTGTCTGAAGGCGCTTTGTACATCT
TTGTTGAACTATGCTCAAAAGATCTCCTACCACAGATTGACGCCGTATAC
GGAAGCACATTTGCAGACAGATATTTGCCTGTCCTAGCGGAGTTAGGCGG
TCTGCGTCATTTCTACAGCGCCGATCGTTTGCGTCAGAGCCTCTGGCGAA
TGCTACCTCGAGTGACAGAGCGCTTGGGCAAGCCGACCTTGAGGCGGTAC
TTAGATCTCTTCACACCCGCGCTTTTCAGTGCCCTCGCCTCGCCCGCGGC
CAGTCCCTTGACACGGCATGCGGCTATGGTATGCATAGCTGAGCTTTGCC
GACAAATGGGCCCCTCGTTTTTTGTGGGTCGGCTATCAGAGGCTGAACGC
CAGCTCTATTTTCGTCACGTTCCTCGTTGGTCTTCACCCCACGGCATTGC
TCGGGCATCGCGATCGGATGGTGGCCTAATTCCATCCCTCCTGCTTTCTC
AACCTGAAGTTGTCAGCATATAGGTGCGCGACCTCTTTCTCATTTGTCCT
GTACTGCATTGCTCGAATAATAACTTGAAGATAAAGAGTTTGACTCTTGG
GATACGTCCTTGAAACTGTTTAGCTCAAGCAATGTCTTACAGGCTAAGAA
TAAATTTCGAAGACAAAGGATGCGTTATAACACTTATGCTTTGACTCTTG
ATTCTTTATCGTACTTAGCGCACAACGTCAGAAA back to topCoding sequence (CDS) from alignment at CM002459.1:503377..506110- >rna2488 ID=rna2488|Name=rna2488|organism=Nannochloropsis gaditana|type=CDS|length=2151bp|location=Sequence derived from alignment at CM002459.1:503377..506110- (Nannochloropsis gaditana)
ATGGACTTTTCGTCGTCCTTGAAAGCCGCAAGCTGCCTGGTAAAGCGGCT
TCGACAAGAAACCACGGGTTCAGAGCTGTCGACCCTGCTGCCCGTCGCTC
AACTGTTATCATCCAAACTTATAGCGAAACCAAATTTTGTTTTGACGGAC
GTGGACGAACCTCTGCGGATCTTAATGACTTTGGGACAGGAGGCACGGTG
GGAATGCTTGTGCGTGGCATTACTGGTCTTCAACGACGCCATAGCACACA
CGGCTCCTGCCCCTGCCGTCTCGCCAGTGCTCCGCAATGCAGTTGAGACG
GTGATCGCACTTCATTTGGAGCATGATGAGCCCAGGGTGAGGCGCCTGGT
CGCCAAGACGCTCGGTTTGCTCTGCACCCTCCCATCCGTGGGGACGGACG
CCTATACGCGCTTTGCTGGGCAATTGTGGGCCAGTGTGGATGCGAATATC
ACGCGGCGTATTACCGAGACGCGGCGGGCAAAGCTGGGTGTAACAAAAAA
CATTGTTATGGACGATGTAAGCGGCTGGCGTTCACTGGAAACCTCTCTTA
TGGCTTTGCGTGAGGTGGTTGAAGCTTGTGGGCCTGAACTGATTCGGCGT
AGTTTGCTCACTCCGGAATGGCTCAACAAGACGGTTTTTACAGCAGCTGA
GCACTCAAATCGTTATGTCAGAGAGGCGGCTATGGACATGGCTCGGGTGG
TGGTCGATCGTTGTGTATGTATCAGCGACAGCGCTTCTTGTGGGAAAGTC
ATAGATTTTAATAGGCTGGCTGCTGTCGTAGCAGGTGGCTTGGCAGATGC
CTGGCCGCAAGTAGTGTATGCGGCTGTCATTGCGACTCGTAGTCTTCTGT
TAACGGCTACAAACCATGTTGGTGTGGATGCCGAAGATCTTTTCGCCGAG
CTCCTTCCTCCACTTTGTCAGTGCCGCTACTATACACCTGAGGGTGTTCA
GGTACAAGCTCAGGAGACCTGGACTCAATTGTTTGCAGCCGCAAACAAAA
GGAAGGATGACGCAGGCAGCGCTGGAAGCGGGCGGGAGGCTGTCGCGCGA
TATGTGAAGGAAATGGTTGATTGCCATTGTCGGGCACTTCAGCATGGACG
CAGCCATTTCACACAGGTCGCCGCGTGTTATGCCCTGAAGGAGCTAATGG
AAAAGATCGATGAAAAGGTAACTTCACCTTTCGCCAATCAAATATTGCGG
GGGATCCTGCCCTGTTTACGGGCTTCGCACTGGGAGCTTCGCTCGGCAGG
ATACGTCGCCTTTGCTCAACTTTCACAAAAATTTCCCGTGATTGTCATGT
CACGACGAGAAGATGCTGTTAACGTCTGTTTTGTTGGATTAGAAGATGAA
TCGTGGTCCATTCGCGAAGAGTCTGCATGGGCACTAGCCGCCATGACTCG
ATATGGGGAAAAAACAAAAATGCAGCAATGCCTTATCACCCGTCTTGAAG
CCACACTGGATGCCGCTCGCCGTCAACCTGTGGAGACCGAAGAAGAGCAG
CTGCGACGCTTCAATGATGCCCAGGCTCACACGGGCGGGCCTGTATTCGG
TTGTTGTGGAGGCCTCTTACATCCTCGTGCAACTCCGTCGGGGGTCAATT
TGCAGACCGACGTAGATATGTCTGCGTATCGTTACGCAGCTCAGCCCTGG
GAAGTGTCTGAAGGCGCTTTGTACATCTTTGTTGAACTATGCTCAAAAGA
TCTCCTACCACAGATTGACGCCGTATACGGAAGCACATTTGCAGACAGAT
ATTTGCCTGTCCTAGCGGAGTTAGGCGGTCTGCGTCATTTCTACAGCGCC
GATCGTTTGCGTCAGAGCCTCTGGCGAATGCTACCTCGAGTGACAGAGCG
CTTGGGCAAGCCGACCTTGAGGCGGTACTTAGATCTCTTCACACCCGCGC
TTTTCAGTGCCCTCGCCTCGCCCGCGGCCAGTCCCTTGACACGGCATGCG
GCTATGGTATGCATAGCTGAGCTTTGCCGACAAATGGGCCCCTCGTTTTT
TGTGGGTCGGCTATCAGAGGCTGAACGCCAGCTCTATTTTCGTCACGTTC
CTCGTTGGTCTTCACCCCACGGCATTGCTCGGGCATCGCGATCGGATGGT
GGCCTAATTCCATCCCTCCTGCTTTCTCAACCTGAAGTTGTCAGCATATA
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