EWM28298.1, cds2480 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|585110643|gb|EWM28298.1| (Armadillo-like helical [Nannochloropsis gaditana]) HSP 1 Score: 1469.14 bits (3802), Expect = 0.000e+0 Identity = 716/716 (100.00%), Postives = 716/716 (100.00%), Query Frame = 0 Query: 1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI 716 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI Sbjct: 1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI 716
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|553196531|ref|XP_005856366.1| (hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526] >gi|422292691|gb|EKU19993.1| hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 983.4 bits (2541), Expect = 0.000e+0 Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0 Query: 1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL 482 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANK KDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL Sbjct: 1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKGKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL 482
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|298710158|emb|CBJ31868.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 323.939 bits (829), Expect = 3.022e-97 Identity = 227/687 (33.04%), Postives = 345/687 (50.22%), Query Frame = 0 Query: 1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDV-DEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLL------CTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDF-NRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQL 678 MDFSS+ A L +R TT L L A+ L + D D +L LG E WE + V L+ + + A +SP ++ HLEH EPRVR LVA TLG L + G AY F +L ++ N R TET + +N+ +DD SGW++LETS +AL+E V+A G I L E + V A H NR+VREA+ + R ++D C +S S + + + A A G+ D W QV YAA +A RSLL + D E + LLP +C RYY +GV++ +QETW GRE V +Y +++ D +C A + +H + +AC+++ E+ EK+ + + +++L+ +L C W +R A VA + + +P E F + D WS+R++SA AL A+ + YGE+ + + + L A++Q E+ E+ R+ NDA+AHTG VF C G L P+ G + D R ++PWE S+GA+Y+ ELC + P++ G TF + LA++ L HF AD LR+++W+ LP + E +GK +R+LD+F LF L+ S L RHAA C+ +L + +GPS F GRL++++R++ Sbjct: 1 MDFSSTHAALRSLKRR---PTTSDALKNL---AEKLEGPFAGDGKGLGDDTQDVEQDVLELLGTE-EWEGVSVGFLLAKSLVDNKGQA--LSPSFLRSLLAHCDQHLEHAEPRVRSLVASTLGALTRADDESSSGCTGLAAYEFFRKRLSGAISKNF-ERTTETITDVISGAENVAVDDTSGWKALETSFLALKEFVDAVGRPFIDGGHLNDETVGYIVSGATVHINRHVREASYQIIRSILDACGTLSGSNAPQQGDKLAHTFAEACAVGMQDNWSQVRYAASVANRSLLKALSP---ADREQFYPRLLPRMCLNRYYLADGVKLFSQETWRMFMGE------------EGREMVGKYAQDVTDYYCMASELD-NHCVRESACHSIAEMAEKVAPQYLATHVDRLLKALLVCFFDESWPVRDAACVASGRFAGAYPEECRPSLEKLYERWFRHVGDPIWSVRDDSATALGAVCKAYGEEAYDK--VSAWVTENLPRAKQQGAESAEQHRRKHNDAKAHTGNQVFSC--GSLAPKLRKGGCS-----DCQVTR-PSEPWEFSDGAVYLVRELCFAN--PEV----GVTFFEE----LADVARLTHFVQADCLRETIWKQLPAMGEAVGKNVFKRHLDVFLKPLFDTLSRITTSQLARHAAASCVRQLSKFIGPSIFRGRLTDSQREI 641
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|675210303|ref|XP_008914036.1| (hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310] >gi|568085813|gb|ETN00715.1| hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310]) HSP 1 Score: 239.58 bits (610), Expect = 2.285e-65 Identity = 202/676 (29.88%), Postives = 311/676 (46.01%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L L V + F Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+LF L L S LT+ AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLTKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|567947880|gb|ETK73649.1| (hypothetical protein L915_19421 [Phytophthora parasitica]) HSP 1 Score: 238.81 bits (608), Expect = 4.232e-65 Identity = 201/677 (29.69%), Postives = 309/677 (45.64%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L D + F Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP V E LGK +RYL+LF L L S L + AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHEFTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMVCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|567976568|gb|ETL27089.1| (hypothetical protein L916_19319 [Phytophthora parasitica] >gi|568006050|gb|ETL80323.1| hypothetical protein L917_19152 [Phytophthora parasitica] >gi|568035945|gb|ETM33568.1| hypothetical protein L914_19194 [Phytophthora parasitica] >gi|570314128|gb|ETO62076.1| hypothetical protein F444_19970 [Phytophthora parasitica P1976] >gi|570937907|gb|ETP03164.1| hypothetical protein F441_19838 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 237.654 bits (605), Expect = 1.029e-64 Identity = 201/676 (29.73%), Postives = 310/676 (45.86%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L L V + F Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+LF L L S L + AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|566010417|gb|ETI33328.1| (hypothetical protein F443_19978 [Phytophthora parasitica P1569]) HSP 1 Score: 237.654 bits (605), Expect = 1.197e-64 Identity = 200/677 (29.54%), Postives = 309/677 (45.64%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L D + F Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+LF L L S L + AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHEFTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|570968215|gb|ETP31334.1| (hypothetical protein F442_19782 [Phytophthora parasitica P10297]) HSP 1 Score: 237.654 bits (605), Expect = 1.351e-64 Identity = 201/676 (29.73%), Postives = 310/676 (45.86%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L L V + F Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+LF L L S L + AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|970641270|gb|KUF83451.1| (hypothetical protein AM587_10010391 [Phytophthora nicotianae] >gi|970659597|gb|KUF97223.1| rRNA-processing protein FCF1 [Phytophthora nicotianae]) HSP 1 Score: 235.343 bits (599), Expect = 9.360e-64 Identity = 199/677 (29.39%), Postives = 308/677 (45.49%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + P PA ++P+ + V+ I H+E+ EPRVR VAK LG+L D + Q+ SV +N++R ET +L V+ N + +DDVSGW++LE+SL AL+ +++ G + ++ LTP+ L + H NR+VR +D V +SD A G + + L + G+ D W QV YAA I+ R+ L+ G DA LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL K+D P +++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG++ + +I +E L A++QP T++E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+LF L L S L + AA C+A++ +Q+GPS F+GRL Sbjct: 74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHELTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|1214690442|gb|OWZ05671.1| (hypothetical protein PHMEG_00022195 [Phytophthora megakarya]) HSP 1 Score: 233.802 bits (595), Expect = 1.904e-63 Identity = 201/671 (29.96%), Postives = 306/671 (45.60%), Query Frame = 0 Query: 62 GQEARWECLCVALLVFNDAIAH------------------------TAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIVM-------------------DDVSGWRSLETSLMALREVVEACGPELIRRS-----LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAV----VAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDL-FTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672 G+E RWE + V L+V D ++ + +P L V+ + H+E+ EPRVR VAK LG+L L V + F Q+ S+++N++R ET +L V+ N +M DDVSGW++LE+SL AL+ +++ G E ++ LTP L + H NR+VR +D V +SD A G ++ V + G+ D W QV YAA I+ R+ L+ G A LLP LC RYY E VQ +QE+W + GRE VA+Y E+VD + SH + +AC + EL KID P ++++ +L C +R A +A AQL FP ++ ++ L D+ WS+RE++A AL + R YG+ + IT E L A++QP T+ E + H F CC L P+ + +R +PWE ++GA+Y+ ELCS + P + A +YLP +A++ LRHF L++++W+ LP + E LGK +RYL+L F P +F+ S + L + AA C+A++ +Q+GPS F+GRL Sbjct: 61 GKE-RWEPIAVFLVVVRDLLSRHLKLADLDANTDFSLPSVELSLYVSTISPFSDAFLTQTVKQAVHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTQE----FTPQIVESIESNLSRSPDFEETGFEELDDNVSNNGMMTPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGEEFLKIERDEFVYLTPRILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFFEAHTSVSDVLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEQ-GRAA--YLPVLLPRLCLNRYYIAERVQRYSQESWRMIVG------------DQGRELVAKYANEIVDYYVEM----TSHCVRESACQCIAELGMKIDATAIRPHVGRLMQALLICFYDVSNLVRDAACLASAQLVLGFPEECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQDALDRVVKIT--EEYLPLAKKQPAMTQLEYDALMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHADGAIYMVRELCS--VAPDV--------AVKYLPQVADIAILRHFPQTATLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQGS---NRLAKFAARDCVAQISKQIGPSIFLGRLD 672 The following BLAST results are available for this feature:
BLAST of EWM28298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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