EWM28298.1, cds2480 (CDS) Nannochloropsis gaditana

Overview
NameEWM28298.1
Unique Namecds2480
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:503588..505738 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28298.1
ProductArmadillo-like helical
Orig transcript idgnl|cribi|Naga_100004g128.9229.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:503588..505738 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
Homology
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|585110643|gb|EWM28298.1| (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 1469.14 bits (3802), Expect = 0.000e+0
Identity = 716/716 (100.00%), Postives = 716/716 (100.00%), Query Frame = 0
Query:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI 716
            MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI
Sbjct:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQLYFRHVPRWSSPHGIARASRSDGGLIPSLLLSQPEVVSI 716          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|553196531|ref|XP_005856366.1| (hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526] >gi|422292691|gb|EKU19993.1| hypothetical protein NGA_2093200, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 983.4 bits (2541), Expect = 0.000e+0
Identity = 481/482 (99.79%), Postives = 481/482 (99.79%), Query Frame = 0
Query:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL 482
            MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANK KDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL
Sbjct:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDVDEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKGKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTRYGEKTKMQQCLITRL 482          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|298710158|emb|CBJ31868.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 323.939 bits (829), Expect = 3.022e-97
Identity = 227/687 (33.04%), Postives = 345/687 (50.22%), Query Frame = 0
Query:    1 MDFSSSLKAASCLVKRLRQETTGSELSTLLPVAQLLSSKLIAKPNFVLTDV-DEPLRILMTLGQEARWECLCVALLVFNDAIAHTAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLL------CTLPSVGTDAYTRFAGQLWASVDANITRRITETRRAKLGVTKNIVMDDVSGWRSLETSLMALREVVEACGPELIRRSLLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDF-NRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLSEAERQL 678
            MDFSS+  A   L +R    TT   L  L   A+ L          +  D  D    +L  LG E  WE + V  L+    + +   A  +SP    ++      HLEH EPRVR LVA TLG L       +    G  AY  F  +L  ++  N   R TET    +   +N+ +DD SGW++LETS +AL+E V+A G   I    L  E +   V  A  H NR+VREA+  + R ++D C  +S S +  +     +  A   A G+ D W QV YAA +A RSLL   +     D E  +  LLP +C  RYY  +GV++ +QETW                   GRE V +Y +++ D +C A +   +H  + +AC+++ E+ EK+  +  +   +++L+ +L C     W +R A  VA  + +  +P       E      F  + D  WS+R++SA AL A+ + YGE+   +  +   +   L  A++Q  E+ E+  R+ NDA+AHTG  VF C  G L P+    G +     D    R  ++PWE S+GA+Y+  ELC  +  P++    G TF +     LA++  L HF  AD LR+++W+ LP + E +GK   +R+LD+F   LF  L+    S L RHAA  C+ +L + +GPS F GRL++++R++
Sbjct:    1 MDFSSTHAALRSLKRR---PTTSDALKNL---AEKLEGPFAGDGKGLGDDTQDVEQDVLELLGTE-EWEGVSVGFLLAKSLVDNKGQA--LSPSFLRSLLAHCDQHLEHAEPRVRSLVASTLGALTRADDESSSGCTGLAAYEFFRKRLSGAISKNF-ERTTETITDVISGAENVAVDDTSGWKALETSFLALKEFVDAVGRPFIDGGHLNDETVGYIVSGATVHINRHVREASYQIIRSILDACGTLSGSNAPQQGDKLAHTFAEACAVGMQDNWSQVRYAASVANRSLLKALSP---ADREQFYPRLLPRMCLNRYYLADGVKLFSQETWRMFMGE------------EGREMVGKYAQDVTDYYCMASELD-NHCVRESACHSIAEMAEKVAPQYLATHVDRLLKALLVCFFDESWPVRDAACVASGRFAGAYPEECRPSLEKLYERWFRHVGDPIWSVRDDSATALGAVCKAYGEEAYDK--VSAWVTENLPRAKQQGAESAEQHRRKHNDAKAHTGNQVFSC--GSLAPKLRKGGCS-----DCQVTR-PSEPWEFSDGAVYLVRELCFAN--PEV----GVTFFEE----LADVARLTHFVQADCLRETIWKQLPAMGEAVGKNVFKRHLDVFLKPLFDTLSRITTSQLARHAAASCVRQLSKFIGPSIFRGRLTDSQREI 641          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|675210303|ref|XP_008914036.1| (hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310] >gi|568085813|gb|ETN00715.1| hypothetical protein PPTG_17908 [Phytophthora parasitica INRA-310])

HSP 1 Score: 239.58 bits (610), Expect = 2.285e-65
Identity = 202/676 (29.88%), Postives = 311/676 (46.01%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L    L  V  +    F  Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+LF   L   L     S LT+ AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLTKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|567947880|gb|ETK73649.1| (hypothetical protein L915_19421 [Phytophthora parasitica])

HSP 1 Score: 238.81 bits (608), Expect = 4.232e-65
Identity = 201/677 (29.69%), Postives = 309/677 (45.64%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L        D +     F  Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP V E LGK   +RYL+LF   L   L     S L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHEFTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMVCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|567976568|gb|ETL27089.1| (hypothetical protein L916_19319 [Phytophthora parasitica] >gi|568006050|gb|ETL80323.1| hypothetical protein L917_19152 [Phytophthora parasitica] >gi|568035945|gb|ETM33568.1| hypothetical protein L914_19194 [Phytophthora parasitica] >gi|570314128|gb|ETO62076.1| hypothetical protein F444_19970 [Phytophthora parasitica P1976] >gi|570937907|gb|ETP03164.1| hypothetical protein F441_19838 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 237.654 bits (605), Expect = 1.029e-64
Identity = 201/676 (29.73%), Postives = 310/676 (45.86%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L    L  V  +    F  Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+LF   L   L     S L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|566010417|gb|ETI33328.1| (hypothetical protein F443_19978 [Phytophthora parasitica P1569])

HSP 1 Score: 237.654 bits (605), Expect = 1.197e-64
Identity = 200/677 (29.54%), Postives = 309/677 (45.64%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L        D +     F  Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+LF   L   L     S L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHEFTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|570968215|gb|ETP31334.1| (hypothetical protein F442_19782 [Phytophthora parasitica P10297])

HSP 1 Score: 237.654 bits (605), Expect = 1.351e-64
Identity = 201/676 (29.73%), Postives = 310/676 (45.86%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L    L  V  +    F  Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+LF   L   L     S L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTHE----FTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|970641270|gb|KUF83451.1| (hypothetical protein AM587_10010391 [Phytophthora nicotianae] >gi|970659597|gb|KUF97223.1| rRNA-processing protein FCF1 [Phytophthora nicotianae])

HSP 1 Score: 235.343 bits (599), Expect = 9.360e-64
Identity = 199/677 (29.39%), Postives = 308/677 (45.49%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH-------------TAPAPA-------VSPV----LRNAVETVIALHLEHDEPRVRRLVAKTLGLLCTLPSVGTDAY---TRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIV-------------------MDDVSGWRSLETSLMALREVVEACGPELIRRS----------LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCG-----KVIDFNRLAAVVAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDLFTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++              + P PA       ++P+    +   V+  I  H+E+ EPRVR  VAK LG+L        D +        Q+  SV +N++R     ET   +L   V+ N +                   +DDVSGW++LE+SL AL+ +++  G + ++             LTP+ L      +  H NR+VR   +D   V       +SD A  G     +    + L   +  G+ D W QV YAA I+ R+ L+      G DA      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  K+D     P  +++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG++   +  +I  +E  L  A++QP  T++E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS               A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+LF   L   L     S L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   74 GKE-RWEPVAVFLVVVRDLLSRHLELPDLDANTDFSVPTPALPLYVSTIAPLSDAFVTQTVKQTIHQHMEYYEPRVRMAVAKLLGVLAKW-----DLHWVTHELTPQIVDSVVSNLSRSPDFEETGFDELDDNVSNNGMITPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGVDFLKEKTTDTGDKEFVYLTPQILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFLETHQSTVSDTLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEK-GRDA--YLPILLPRLCLNRYYIAERVQKYSQESWRMIMG------------DQGRELVAKYATEIVDYYVEM----TSHCVRESACQCIAELGMKVDPTAIRPHVSRLMQALLICFYDVSNLVRDAACLASAQLVLGFPDECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQEALDR--VIKVMEEYLPLAKKQPAMTQQEYDEIMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHTDGAIYMVRELCS----------VAPEHAVKYLPQVADIAILRHFPQTAVLQETIWKQLPMMCEALGKKVFKRYLELFFDPLVFTLQ--GTSRLAKFAARDCVAQISKQIGPSIFLGRLD 691          
BLAST of EWM28298.1 vs. NCBI_GenBank
Match: gi|1214690442|gb|OWZ05671.1| (hypothetical protein PHMEG_00022195 [Phytophthora megakarya])

HSP 1 Score: 233.802 bits (595), Expect = 1.904e-63
Identity = 201/671 (29.96%), Postives = 306/671 (45.60%), Query Frame = 0
Query:   62 GQEARWECLCVALLVFNDAIAH------------------------TAPAPAVSPVLRNAVETVIALHLEHDEPRVRRLVAKTLGLLCT--LPSVGTDAYTRFAGQLWASVDANITRR--ITETRRAKL--GVTKNIVM-------------------DDVSGWRSLETSLMALREVVEACGPELIRRS-----LLTPEWLNKTVFTAAEHSNRYVREAAMDMARVVVDRCVCISDSASCGKVIDFNRLAAV----VAGGLADAWPQVVYAAVIATRSLLLTATNHVGVDAEDLFAELLPPLCQCRYYTPEGVQVQAQETWTQLFAAANKRKDDAGSAGSGREAVARYVKEMVDCHCRALQHGRSHFTQVAACYALKELMEKIDEKVTSPFANQILRGILPCLRASHWELRSAGYVAFAQLSQKFPVIVMSRREDAVNVCFVGLEDESWSIREESAWALAAMTR-YGEKTKMQQCLITRLEATLDAARRQPVETEEEQLRRFNDAQAHTGGPVFGCCGGLLHPRATPSGVNLQTDVDMSAYRYAAQPWEVSEGALYIFVELCSKDLLPQIDAVYGSTFADRYLPVLAELGGLRHFYSADRLRQSLWRMLPRVTERLGKPTLRRYLDL-FTPALFSALASPAASPLTRHAAMVCIAELCRQMGPSFFVGRLS 672
            G+E RWE + V L+V  D ++                         +  +P     L   V+  +  H+E+ EPRVR  VAK LG+L    L  V  +    F  Q+  S+++N++R     ET   +L   V+ N +M                   DDVSGW++LE+SL AL+ +++  G E ++        LTP  L      +  H NR+VR   +D   V       +SD A  G       ++ V    +  G+ D W QV YAA I+ R+ L+      G  A      LLP LC  RYY  E VQ  +QE+W  +                GRE VA+Y  E+VD +        SH  + +AC  + EL  KID     P   ++++ +L C       +R A  +A AQL   FP       ++  ++    L D+ WS+RE++A AL  + R YG+    +   IT  E  L  A++QP  T+ E        + H     F CC   L P+            +   +R   +PWE ++GA+Y+  ELCS  + P +        A +YLP +A++  LRHF     L++++W+ LP + E LGK   +RYL+L F P +F+   S   + L + AA  C+A++ +Q+GPS F+GRL 
Sbjct:   61 GKE-RWEPIAVFLVVVRDLLSRHLKLADLDANTDFSLPSVELSLYVSTISPFSDAFLTQTVKQAVHQHMEYYEPRVRMAVAKLLGVLAKWDLHWVTQE----FTPQIVESIESNLSRSPDFEETGFEELDDNVSNNGMMTPPQSPEGTPRTPSTPYRLDDVSGWKALESSLCALKYIIKGSGEEFLKIERDEFVYLTPRILELVATKSCFHINRHVRVVGLDTITV-------LSDIAPVGFFEAHTSVSDVLNKCIKRGMEDNWCQVRYAASISARTFLMKLQEQ-GRAA--YLPVLLPRLCLNRYYIAERVQRYSQESWRMIVG------------DQGRELVAKYANEIVDYYVEM----TSHCVRESACQCIAELGMKIDATAIRPHVGRLMQALLICFYDVSNLVRDAACLASAQLVLGFPEECRPFLDELYHLWIDHLSDDIWSVREDAAIALGNVIRAYGQDALDRVVKIT--EEYLPLAKKQPAMTQLEYDALMRSEKKHLSKQAFSCCS--LEPKL----------FERHEHR-DKEPWEHADGAIYMVRELCS--VAPDV--------AVKYLPQVADIAILRHFPQTATLQETIWKQLPLMCEALGKKVFKRYLELFFDPLVFTLQGS---NRLAKFAARDCVAQISKQIGPSIFLGRLD 672          
The following BLAST results are available for this feature:
BLAST of EWM28298.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110643|gb|EWM28298.1|0.000e+0100.00Armadillo-like helical [Nannochloropsis gaditana][more]
gi|553196531|ref|XP_005856366.1|0.000e+099.79hypothetical protein NGA_2093200, partial [Nannoch... [more]
gi|298710158|emb|CBJ31868.1|3.022e-9733.04conserved unknown protein [Ectocarpus siliculosus][more]
gi|675210303|ref|XP_008914036.1|2.285e-6529.88hypothetical protein PPTG_17908 [Phytophthora para... [more]
gi|567947880|gb|ETK73649.1|4.232e-6529.69hypothetical protein L915_19421 [Phytophthora para... [more]
gi|567976568|gb|ETL27089.1|1.029e-6429.73hypothetical protein L916_19319 [Phytophthora para... [more]
gi|566010417|gb|ETI33328.1|1.197e-6429.54hypothetical protein F443_19978 [Phytophthora para... [more]
gi|570968215|gb|ETP31334.1|1.351e-6429.73hypothetical protein F442_19782 [Phytophthora para... [more]
gi|970641270|gb|KUF83451.1|9.360e-6429.39hypothetical protein AM587_10010391 [Phytophthora ... [more]
gi|1214690442|gb|OWZ05671.1|1.904e-6329.96hypothetical protein PHMEG_00022195 [Phytophthora ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2488rna2488Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications