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Properties
| Property Name | Value |
|---|
| Product | 10 kda chaperonin |
| Orig transcript id | gnl|cribi|Naga_100004g110.9241.mrna |
| Orig protein id | gnl|cribi|Naga_100004g110.9241 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:465962..466943 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2469 ID=rna2469|Name=rna2469|organism=Nannochloropsis gaditana|type=mRNA|length=5883bp
ATGGTCTCCACGGCACATCAACTTCGAGCCATCCTATGGAAAAATATCCT
GCTGAAGCGCCGGCACTGGATTTCTACATTTTGTGAGGTTGCCATCCCTG
TTTTGTTCATCGGTCTGTTGGTCTGGATCAAAACTATTTGCACAAAACGT
GACGCGCCGAACGTGGCCTACGCCTGTGGCCAAACGAAAGGCTTCGATTT
TTACGCGCCCAGTCTGTCCGCGAACCTCACCGGCGTCCCTCTTCTGCAGT
GCCTACAACCACCCGACACGTGTGTAGAGCCAGGGTACTACCGAGGTGAG
CTAACGGAGCTTGATCCCCGCCTGCCACCCTTTTACATGGAGTACGGGTA
CACCCCCTCGGGCAAGGGCTATCCCTTTTACGCCCTGACCGTCGGCGATG
ACAGCCAGCTGTACGAGCAAGTCAACTCTTTGTTAGCTTTGCAGAATATT
TCTGCCCTCGCAAACAACCCTTCCCCCACGCTGGACGAGGTCACTCAGGC
GTACTTCCGCTCCAAGGCTGTCCTCGTTGTGTGCCCCGCCACCGCGTCCT
CGCCTTCCCTGGTGGCGGCTACTCAGTCTCTCTACACACACTTGCTTGCC
ACTTTGACGTGGGTGGGTCCACATGAAGAAGCGATTGTTCTCCTTCCCTC
TCAGGCGGCCCTAGAAGCCAACGTGACGGCCCAGGGTTACGAAGACAGTG
TGAAGGTGGCCGCCGCCATCGTGGTCAATGAGGTGGATCCGCGGGGCCCT
CGGTGGGACTATTCGGTCCGCGTTAACTTCACACAGACGTTTGAGACGGT
GCAGGAGACAGTGGGATGCTTGCATGCCAAGTGCGCCTTCCAATACACGG
TCCCCACCACCCAGTTCCTGGTCAACCCCTTTGTCAAACCCGCCAAGGCA
GAGTTCCTCTTTGGCTACACCTACACGGCATTTTCGACGCTACAAAAAGC
GGTGGATGATTTCATTTTAAACGAGGCTTCTAGACGCGGACCCATCGAGA
CGACTATCTCGCTTGGGCTCTTCCCGGAGCCCGCCTTTCACTCGGACGAT
TTCCTCACCGTGATCGCGGCCTCGCTGGCCCTCTTCTTCGTCCTCGCCTT
CCTTTATCCAGTCTCACGCTTCCTGCGTGCCCTTGTCCTTGAGAAGGAGA
CGAAGATCAAGGAAACTATGAAGATTATGGGCCTGTCCGCTTGGGCTGCG
AACCTCTCTTGGGTGCTGACGATGGTCGCCCAATCCACGGTGACCGTCTC
CCTCATGACGCTTCTAGGCGCGCGCACAGCCTTCAGCTACTCCAACTCAT
TTCTCATCTTTCTCTTCCTGCTGGTGTTCTCTTTGGCCTTGGTCATGTTC
GTCTTCCTCGTCTCCACATTCTTCAGCAAGGCCAAGACGGCAGCCACCGC
AGGAACGGTCATCTTCTTCGCCTCCTTTTTCCCCTACTACGCTCTGACGG
GGCCCGGCGTCGCAGGCATCAGAACGAAAGCTGCTGCGTGTCTCCTCGCT
CCAACCTGTCTTGGCCTGGGCGCAGATGTCCTGGCGGCCTTCGAGGGGGG
GCTTATGGGCCTGCAATGGGACAATATCTTCCTCCAACCCGCGGAGACCA
ATTTTTCCTACGCTGCGGCGGTGGGGATGCTGCTCCTAGACGCCGTATTA
TACGGTCTGCTTGCCGCTTACCTCGAGGCTGTTCTTCCATCTGAGTTTGG
TACTCAATTACCCTTTTACTTCCCGTTCCTTCCATCCTATTGGCGAGGGC
GAATGGACGAGGAACCTCGTGGTCGGCACCGAGGCCGGCGAATCTTTGGA
GGGATGCTCGACAGCAATGCCCCGAGTGAGAGGGGAGAACCGCTCTTGAC
GCTGACAGAAGATGATTTCCTCAGTAGAGGTGGTATGGGAGATGAGCAAG
AGGGTATCGATGAGGAGAATGCTCCTTTAGTTGAAGCCGTAGAACCAGCT
TTACGCGGACAAGCAGCGGAGGGACGAAGCTTAGAGATTCAGAGCCTGAG
AAAGGTTTTTGCGACTACCTCAGGCAATCGAGTGGCGGTTGACAGACTGG
ACATGGCAATCTACGAAGGGCAAATAACCGTGCTGCTCGGGCACAATGGT
GCGGGCAAGTCTACAACAATAAGCATGCTCACTGGGCTAGTGCCGCCCAC
AGCGGGAGATGCGCGGGTCAGAGGCCTGTCTTTGAACCATGATATGGCTC
GCATCCGTCAGAACATGGGGATTTGTCCTCAACATGACACCCTCTGGCCG
GAATTGACTGTCGCAGAACACCTCGAAGTATATGGGGTTCTTAAGGGCGT
GCGGCCGGGGCGGACGCTAAAAGATGCCGTGGAGAGGATGATTCAGGAGG
TTGGGCTCCAGGACAAGGCTCAAGTGGAGTCCAGTCAGCTTTCTGGAGGC
ATGAAGCGAAAGCTTAGCTTGGGAATGGCTTTGATTGGAGATTCGAAAGT
TGTTCTGCTGGACGAGCCGACATCTGGCGTTGATACCTTCTCGCGACGGC
AGATCTGGGGCGTGCTAGAACGGAACAAACGCGGGCGCGTCATGCTTCTG
TCCACGCATTTTATGGATGAGGCCGACATGTTGGGTGACCGTATCGCCGT
CATGGCGGACGGCCGGCTCAAGGCCCTAGGCTCCAGCCTTTTCCTAAAAT
CCAGGTACGGGGTAGGATACACCCTTGTAATAGTAAAAAAAGAGCACGCT
ACGCCCTCGGCACCCATCGTGGAGGCAGTTCGTGGAGCTGTTCCTGCAGC
CGAGGTGATAAGCGATGCGGGCGCTGAACTCGCCTTCCGTCTTCCATTTA
GCGCCAGTCCTGTTTTTCCAGGCTTATTTAGAGATATTGATGCGCGCAAA
GACCACGGGGAACTGCAGATTTCTACCTACGGGATTTCTGTCACAACGCT
ATTCGAAGTCTTCCTGCGGATTGGAGAAGACAGGGTCTCGACTCGCAGTA
AACCTTGTGCGCCTGTAGCATCATCTTATCTTCCTGTGCACGGGTTGGAT
TCCGCAGAGGGGAGTGCTAGCGACACAGGCAATTCTCCGGCGATTGCGAC
CAAAGTGGACAACAGGAACGTCTCTTTCGAACGTCACGTGAAAGCTCTCC
TGGCTAAAAGGTACATTTACGCAGCGAGGGACCGAAAATCCCAATGTTGT
TTGCTCGTTTTGCCTGCTATCCTTATTCTTTTCGGGCTCAGTCTCATAAA
ACTTCTGGGTAACCCCTTGATTCAAGACAGTCTGGTTCTTTCTCCCAACA
TGCTGAATGCGGACCTTGTCCCGGAGGCTCGCAATCCATTCCCTGTACTC
GCACATTCTCCTGCTTCTCGCGCTATTATGAGCGAATTCGATTATGATCG
CGGACTTTATGCATCGTACATCGACGTGGCTTCTGATAGCAGCGATGACG
CAGTCGATGAGGATCCCTTCTACACCTGTGCCGTGGGTGCCAAGGATGTC
CTAAGAATGAGCAGGTACTTGGCTAACACGGCCATTGCCCGCACCACGGG
TCCTGCATCGCGCTACGGCGCTTTAACTTTTGCGAATTCGACTGATCCAA
CACACTATACGTATAATATATTGCTGAACGCCTCCGCCTTGCACGGGGCA
GGTGTGTACATGAACCTTGCATCGAATGCCATCCTACGGAATTTGGTAGG
GTCTCCGGCAACGACTGCAGACGACCAGCCTCTTATCATCATCCGAAATC
ATCCTTTGCCGTTGACACATGAAGAGCAGCGAGCTTCATTTTTGATCGAA
GCGAACACAGCCAGTACGTTTGTTTTGATTGGGCTATCCTTCATCAGTGC
GAGTATCGCGATTTTCATCGTCAAAGAGGCTGAGTCGAAGGCAAAACATC
AGCAGATAATAAGCGGAATTTCACTTCTGGCCTACTGGCTGGCCAACTTT
GCATGGGACGTGCTCTCTTGGCTCCCGTCCTTGGGGATAACCCTCGCATT
AATGTACGCGTTCGGAGTCAAGTCCTACACGACAGGTCAAGCTGGAGGCG
CTTTCGTGCTCCTTTTCATCGCGTTTGCACCAGCTGCGACGGCATTTACC
TACGTTTGGACCTTCTGCTTTTCTAGTCATAGCGCCGCGCAGACCGTGGT
CCTCTTTATCAATTTTTTAACCGGGCTCGTTCTTTCCATCGTATCATTCG
TTCTGTCCCTGATCGACAGCACGCGAGCCATCAATCTCAAACTTCGCTAT
GTCTTCAGGCTCTTTCCACCGTTTTGTTTTGGAGATGGCCTTCTCCAGCT
AGCATTATGCGTAGATGATGTGTGTCCCAAAATCACAGCCGCAGGCATTT
CTATCACAGAGCCTTTGACACCACTGCACTGGGATGTTACTTTGGCAAAC
ATTATCTTTATGTTGGTGGAAGCATTATTATACTTCCTCATCACACTCAT
CATCGAGCACGCCCGCGCTCAACCTTGGATCGCCGCTCTGGCTGCGTGGC
GACCCAAGTCGTGGGTACTGGGGCGAAAAACAAAGCTTGGACCTACTAGG
AGACATACCCGTAAAAGCACTGGGAAAGGGGCACAAGGGGTTGCAACTGA
CGTCGAAGGTGGCGAGGAGGACGACTACGACGACGAAGACGTGAAGGCAG
AGGCTGAGCGTGTTTTATGCGGAGAAAGCAGACGTGTTAATGATGTGATT
CGGCTTGAGGCACTCCGCAAGGTTTTTCAGACTGCACGAGGCCCGAAGGT
TGCAGTCCGCGGCCTGAGTTTCGGGATTCCCAAGGGCGAGACATTTGGTT
TCTTGGGCATCAATGGGGCGGGCAAGACCACGACCCTTTCCATGCTGTCC
GGCGAATTCCCACCGACGTCGGGCGCCGCCTACGTGGCTGGGTACAGCAT
CACGACCGAGCAACCAAAATTGCGCAAAAATATTGGCTTTTGTCCACAAT
TCTCAGCATTGATCGATGTCCTTACCACACGGGAACATCTTACGCTGTTT
GCGCGCATCAAGGGGCTGCCGGAACCAAGTATCCCGGCCTTGGCCGTTGC
CAAGATGAAAGAGATGGATCTGCTAGATTTTGCTGACAAGGCCGCTGGGT
CTCTTTCCGGCGGGAACCAGCGCAAGGTGAGCATGGCCATAGCCACCATC
GGCGATCCCAGTGTCATTTTTGCCGACGAGCCGTCGACGGGGATGGACCC
TGCTAGTCGGCGCAAGGTCTGGGACGTCCTGTCCGCCATTCGGAGCAAGC
AGAGCTCCATTGTCCTCACCACGCACTCTATGGAAGAGGCAGAAGCGCTT
TGCACAAGAATAGCAATCATGGTTGCGGGTAAACTTCGCTGTCTTGGTAC
GCCGCAGCACCTCAAGTCCAAATTTGGGGAAGGCTTCGAGCTGGAAGTGA
AGGTGAGAGCTTCAACTCCGGCGGAGCTGGCTGGCGTGGTGCAAGACCGC
CTGGGTAGCCGCCGCTCTTTCACTCTGCCAGATGTTAAGGACGCTTGTAG
GGCATGGGGCCGGCCTGATTGGGCGACGCTTGTGTGTGAGACGGGTTCCG
GAGCGACAATATGGGCGATAGTCCGGGACGGGGCCGAAGTCCCTGCCCTG
ACTCTGGCCGAGTGGCTGTTGGCAGAAGAAAGTGCCGAACGCTTGTGCAA
ATTCCTGAAAGAACAATTCGGGAGAGGGGTGCGACTCATCGAGCGCGCCT
CGTGGCTGACATCTCGCTTCAGCCTGCCAGCACGAGCGAGCTCGAGTGAG
GAGGGGGGGGGAGGAAGAGGGTGTACGGGACCCCTGTCACTTGCTGACAT
GTTCGAACGGCTGGAGTCAGGCAAGGCAATGTGCAGCATCATCGAGTACG
CCTTGGGCGAGACTCAGATTGAGGTCATCTTCAACCGTTTGTGCGCACAA
GGTCAGGGTGGAGACCAGTCAATGGCCTCTTGA back to topprotein sequence of rna2469 >rna2469-protein ID=rna2469-protein|Name=rna2469|organism=Nannochloropsis gaditana|type=polypeptide|length=161bp
MERCMRTRPHVSGVARVHKNRTHGITSSSCFFKRVQFQVVSPSRKNHVLA
RPPPLHPLPSQTDMSLRKLIPLADRILVQRILPKTQTAGGVFLPETKLDK
PNEGKVIAVGAGGRKADGTLIPPSVKEGDTVLLPEYGGHTVKLGDEEYQL
FRDEDLLGKFT back to topmRNA from alignment at CM002459.1:465962..466943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2469 ID=rna2469|Name=rna2469|organism=Nannochloropsis gaditana|type=mRNA|length=982bp|location=Sequence derived from alignment at CM002459.1:465962..466943- (Nannochloropsis gaditana)
ATGGAGAGATGCATGAGGACGAGGTACGGGGGGAAAAAATCAAGGCCGGC
GAAGCACACCTCTCAGTCCCAAAGGTCAGGATCTCCGAGTCGCTGTCTCG
CGTTCACTCCCAGCTTGAGCCTGCGGCGTGTGCGGCAGCGTGGATCTAAT
TGCAAGGCGCCGGGGGGCCGCATTCTCTCATTTCACCCCTCGAGGCGAGT
CGCAGCGACGCCCTAAAGAACACTCGAGAAGGACCGCGAGGTTCTCGCGG
TCGCTTTGGGGTGGGAGCAGGCCGCATGTGAGCGGTGTTGCACGTGTGCA
CAAAAACCGGACCCACGGTATCACATCGTCCTCATGTTTTTTTAAACGCG
TACAATTTCAAGTTGTTTCACCCAGCAGGAAAAACCACGTACTAGCCAGA
CCTCCCCCACTCCATCCACTACCTAGTCAGACAGACATGGTGAGTGCCAA
GTCCTTGAAATACTGCCAGAGGGCCCAATCCCTCGCACACTTTTCTGGAT
CACGTAATGATTGATTTATTGCTTTTAGTGCTTGGCACTCAGGGCTGGAT
TTTGAAGTTTCGAGAAGGAGGGAAGGAAAGAATGCCCCATCTCATCCTGT
TACAACTTTTGCGGCTGTGTAAGGCTAGCTGGACTGCGTAAGCAATCATA
TTTACATCATTCATTTCCGTTCACCCGTTGTTCACCAGTCCCTCCGCAAG
CTTATTCCTCTCGCCGACCGCATCCTTGTGCAGCGCATCTTGCCAAAGAC
CCAGACAGCTGGCGGGGTCTTCCTCCCGGAGACCAAATTAGACAAGCCGA
ATGAAGGCAAAGTCATTGCGGTTGGTGCAGGTGGACGCAAGGCAGACGGA
ACGCTGATCCCCCCCAGCGTTAAGGAGGGGGACACAGTGCTTCTGCCTGA
GTATGGCGGCCACACAGTGAAATTGGGGGATGAAGAGTACCAGCTGTTTA
GGGACGAGGATCTGCTGGGAAAGTTTACGTAG back to topCoding sequence (CDS) from alignment at CM002459.1:465962..466943- >rna2469 ID=rna2469|Name=rna2469|organism=Nannochloropsis gaditana|type=CDS|length=1458bp|location=Sequence derived from alignment at CM002459.1:465962..466943- (Nannochloropsis gaditana)
TCCCTCCGCAAGCTTATTCCTCTCGCCGACCGCATCCTTGTGCAGCGCAT
CTTGCCAAAGACCCAGACAGCTGGCGGGGTCTTCCTCCCGGAGACCAAAT
TAGACAAGCCGAATGAAGGCAAAGTCATTGCGGTTGGTGCAGGTGGACGC
AAGGCAGACGGAACGCTGATCCCCCCCAGCGTTAAGGAGGGGGACACAGT
GCTTCTGCCTGAGTATGGCGGCCACACAGTGAAATTGGGGGATGAAGAGT
ACCAGCTGTTTAGGGACGAGGATCTGCTGGGAAAGTTTACGTAGGCCGCA
TGTGAGCGGTGTTGCACGTGTGCACAAAAACCGGACCCACGGTATCACAT
CGTCCTCATGTTTTTTTAAACGCGTACAATTTCAAGTTGTTTCACCCAGC
AGGAAAAACCACGTACTAGCCAGACCTCCCCCACTCCATCCACTACCTAG
TCAGACAGACATGATGGAGAGATGCATGAGGACGAGTCCCTCCGCAAGCT
TATTCCTCTCGCCGACCGCATCCTTGTGCAGCGCATCTTGCCAAAGACCC
AGACAGCTGGCGGGGTCTTCCTCCCGGAGACCAAATTAGACAAGCCGAAT
GAAGGCAAAGTCATTGCGGTTGGTGCAGGTGGACGCAAGGCAGACGGAAC
GCTGATCCCCCCCAGCGTTAAGGAGGGGGACACAGTGCTTCTGCCTGAGT
ATGGCGGCCACACAGTGAAATTGGGGGATGAAGAGTACCAGCTGTTTAGG
GACGAGGATCTGCTGGGAAAGTTTACGTAGGCCGCATGTGAGCGGTGTTG
CACGTGTGCACAAAAACCGGACCCACGGTATCACATCGTCCTCATGTTTT
TTTAAACGCGTACAATTTCAAGTTGTTTCACCCAGCAGGAAAAACCACGT
ACTAGCCAGACCTCCCCCACTCCATCCACTACCTAGTCAGACAGACATGA
TGGAGAGATGCATGAGGACGAGTCCCTCCGCAAGCTTATTCCTCTCGCCG
ACCGCATCCTTGTGCAGCGCATCTTGCCAAAGACCCAGACAGCTGGCGGG
GTCTTCCTCCCGGAGACCAAATTAGACAAGCCGAATGAAGGCAAAGTCAT
TGCGGTTGGTGCAGGTGGACGCAAGGCAGACGGAACGCTGATCCCCCCCA
GCGTTAAGGAGGGGGACACAGTGCTTCTGCCTGAGTATGGCGGCCACACA
GTGAAATTGGGGGATGAAGAGTACCAGCTGTTTAGGGACGAGGATCTGCT
GGGAAAGTTTACGTAGGCCGCATGTGAGCGGTGTTGCACGTGTGCACAAA
AACCGGACCCACGGTATCACATCGTCCTCATGTTTTTTTAAACGCGTACA
ATTTCAAGTTGTTTCACCCAGCAGGAAAAACCACGTACTAGCCAGACCTC
CCCCACTCCATCCACTACCTAGTCAGACAGACATGATGGAGAGATGCATG
AGGACGAG back to top
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