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Properties
| Property Name | Value |
|---|
| Product | lipid droplet surface protein |
| Orig transcript id | gnl|cribi|Naga_100004g99.9135.mrna |
| Orig protein id | gnl|cribi|Naga_100004g99.9135 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:439352..441278 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2461 ID=rna2461|Name=rna2461|organism=Nannochloropsis gaditana|type=mRNA|length=2387bp
ACGGGCGGGCTAGCGATGTGAATCGCTATTATCCCAGATAATCCTAGTTG
TATTAAACATGGCTTCAAAGAGACCATATCACCACCAGCGCGCCCCTTCA
GGCAGATCATATCGCAGACGTAGAGCATGACGTTAGAATGGACTGGCGGT
TTTGGCAACGTGAGACGAGCAGGAGAGATTGCTGTCGAAGTATTTGTCTG
TCGAGTAGAGTATCGTCTCTTAACCTTCTTCCGAACGGACATCGCGGGAC
AAATTTTCTTAAACTCCCTGAAAGTTCTCAACCAGCGTCAAATTGTTGTG
GTGCTTTCTGGTGATGCTGCTTTGGAGAAATGACAGTATCACGCCCTCCG
CATGGGGGCATGAGTCGATCAGATTGATGTGAGACGCTTTGTTTAACTGA
CTGTCGCACAGCCCTAGTGGTGGTATACAGCAGCGATATCTTCAATCTTT
TTACGTTTTCCTCTGTATTTGCACAGGACTCCACATGGCTTCATTTTCTC
CACCACGTTCTGTCACGCCAGACGGCAGTCCTCCACCTGCCTCGTCCAGC
CTCGCCTCGCATTCGGGGGGCTCAGGCTACCGACAACTCCGCCATCTCTC
ACAAAGCACAACAGAAATGTCTGCCTCTGGACCTCCGCAAGAAAAGACAA
GCACGCGGATCGCGATCCTCATCTTTTTCAAGGGTCTCTTTGGTGCCGGA
GTGCTCGCCATCCCCGGAGCCTTCGGCAGTACAGGGGTCCCCCTGGGGCT
CCTCATTTTCTTGGCCGTCTGCACTCTGTGCCTTGGTACCATGCTGATGC
TTCTACGATGCAAGGTGAGCATCAGTCCATGCACCCACGCGCTAATTACT
GGATTTGTCTCCGTCGTTCCGCCGTCCTGTCGATCAGTATCATCTCCTCG
GACCAACATCTCTCCCCACTCTCCCCTCACTCTATTCACTCGCCCCTTGG
ATTCCCTCAGGACTTGCTTCGAGAGGAGCAGGGCATAGTCGTTGAGAACT
ATGAGGAGCTGGCCGGCGCGGTCTTCGGACCTCGGGCCTTCCGCTTCTGC
CAGACCCTGATGGCCACTCTGACCCTCATCTACACCTCCGGCTTCGTCAT
CGTCATCAGCAGCAGCCTCTACGACGTGATGCCAGCCGTCCCCCGGGCCA
TGTGGTGCGCCATCGTCTTCCCCATCCTCACCCTGCTCTCCTGGGTCCCG
TTCATGGAAGACCTCTGGTTCGTGTCCCTGCTGGGTCTGGGCACCTACCT
CTTCGGCGTGGTGGGCTCCACCCTCTTCGTGGCGGCCAGAGACTTCGACC
CCCCGCCCGCCCCCATGGCCTGGCACTGGGAGGGTGCCGCGCATTTCTAC
GGCGTCGCTGTCTACTCCCTGGAAGGTATCAACCTGACGTTGCCGGTGTC
CGCGTCTATGAAAAGCTTGCGGAAGCCTCCCTTGGTCATGACCGTGGGGG
TCTGTCTCTTTGCAGGCATCACCGCCTTCTATGCGTCCTTCGCCTACGCC
GCGGGGCTTGGGAGCTGTGACATCATCATCCAGTGCCTGGGCCCGGGCCC
CTTCGTGAACGTCATCAGGGTCGCCTTGGCGCTCTCGCTTTTGGCCACGC
ACCCGGTCTACCTAATCGTAGCGTCGGAGATTTTTGAGAGGGCTCTCCTC
GGAGATCCCTCCGTGCCGGTCCCAGAGGCCTTGGACGGGGCCCAGGAGAC
GGAGGAGGCGGGGCTGGAGGACGAGACAGAGGGAGCGGGGACGGCCATGA
CGGGGGCAATGCTCCCCGTTGTCTGCAGGAGTGGGAGCCACCAGAACAGT
AGTTGGGTCGACCACAGTGAGGACGGTCGAAGTCACGCCAAGGCCACGTC
TCCGCAACGCCTGGAGGTATCGGTACAGGGAGAGGACAATGGTAGAGAAG
ACGGCCTGCACGAGAGGGAAAGCATGGGGGCTTCTACTCAGAGTAACAGC
CGCACCTCAGCTTCCCTCCCCTTGCCTGCTTCCATCTCTTCCTTCGCATC
CCGTCGCTTGGCCACCCGGCAAGCGCAGGCCCGGCTCATCCGTGCAGTGG
AGGTGTTTCTGACCTGCATGGTTGGCGCGCTTATCCCCAATTTGGGCGTC
TTCACGTCGCTCGTCGGCGCCACTTTTGTGACGATCATTGGCTTCATTTT
TCCGGCTGCGATGTGGCTGGAATTGCAAAGAGAGGACACGCACGCCTCCT
TTTGGGCCAAAGCGAGGGTTTATGGAATAGCAGGGCTGGTCATCGCCGCG
GGGTTAGCGGCCATGGTGGTTGGGACGGTCGAGGGTCTCAGGAACTTGTC
TTCCTGAGCAATGAGGGGGAAGGGAGAGTAGTGGCCACCGAAAGCATGTT
GACATATTAAATAGCGCAAATTCCTGAAAATATCAGA back to topprotein sequence of rna2461 >rna2461-protein ID=rna2461-protein|Name=rna2461|organism=Nannochloropsis gaditana|type=polypeptide|length=287bp
MSPLTGRLQSANPQQASMPRSTMGRLRVRLNRARNLKGPEILGMSNCLVV
FTYEGKREESSVKVNDIAPAWHEEVTFDKVPYPPSSKISITIVYRSGKTD
EVLGVACPGSNLWTTGNAPPQDRWLPIATKEGIYAGELNFHIHWTKTEVQ
YRPAVRLLQRGVLKTQEFTRPLEPALERAMALTSGIGSTVSRKIEGMGRT
QKRVTGAVLAAVLASGGFFLVVPAILFLPVTLILLGGFFFCSFLALPVLT
SFMWVLVCTKPVQSKVIGPLVERLLRYETVKKVLTSE back to topmRNA from alignment at CM002459.1:439352..441278+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2461 ID=rna2461|Name=rna2461|organism=Nannochloropsis gaditana|type=mRNA|length=1927bp|location=Sequence derived from alignment at CM002459.1:439352..441278+ (Nannochloropsis gaditana)
ACAGAAATTTATTTTATCAATTGTTCCGACTCCGGCCCTcactcctcgtc
cttcacAGGTCAATGAGTCCTCTTACCGGCAGACTCCAATCCGCCAACCC
TCAGCAAGCCAGCATGCCGAGGAGTACGATGGGTCGTCTGCGAGTCCGTC
TCAACCGTGCGCGCAACCTCAAGGTGTGTACTTGGCTGACGCTTTGCAGA
TGCACTCAatgaggggggaaattgagtagacgaaggaaggacaCGTGGAC
GCACTTTTTGACAGCTTGTGAAATTCTCTACGTGATTGTATTCTTCTTCT
TACAAAAGTGCTTATTCAACTGGCAAAATTTTAAAGGCGATCATATTCAA
CTTGTCACGACGGAAGCCGTTCCCTTGGAGAACCTCTTCTGTTCGTCAAA
TCATGCACTTCATTAGCGAGCATGGTGTCTTAAAAGAGTCACTCTACTTG
CTATTTCTGACAAAATCAAAACAATAACAGGGTCCTGAAATCCTAGGCAT
GAGTAACTGCCTGGTCGTTTTCACATATGAAGGAAAACGGGAAGAGAGCT
CTGTTAAGGTCGGTGTTAAGAGGATGGCATGAGGACAGGACAAGGCATAT
TGTATGAAAAGATTAACTGTGAATTTAAATGCCTATATACCTGTCATTCA
TGACCCAGGTGAATGACATCGCCCCTGCCTGGCATGAGGAAGTGACCTTC
GACAAAGTGCCTTACCCCCCTTCGTCCAAGATATCCATTACCATTGTCTA
TCGCTCCGGGAAGACGGACGAAGTCTTGGGCGTGGCATGCCCCGGATCCA
ATTTATGGACGACCGGCAATGCGCCCCCCCAAGATCGCTGGCTACCTATT
GCAACGAAAGAGGGCATTTATGCCGGTGAATTGAACTTCCACATTCACTG
GACGAAGACGGAAGTCCAGTACCGCCCCGCTGTCCGCCTCCTACAGGTGC
GTAAGAAGATAGCGCTGTTTCCCACGCATCATGCGATTTAAGTCAAATga
acaggaaggggggcggaaaTAGTGCGGACGTCGGCTCTAACACTTGAGAT
AGAGTTATAAGAtatcgggggagggggatggagagggaggtaatGCGGAC
AGAGTAAGAGTCAGCGTACCGGTGCAAGTAGCCCGCGAGCCTCCTTTGTT
CCTTTTCTACCTTTTCATACGTGTAATATATTTATGCAACTACGACAGCG
GGGAGTCCTGAAGACTCAGGAATTTACGCGCCCTTTAGAGCCTGCGTTGG
AGAGAGCGATGGCGTTGACAAGTGGGATTGGTTCCACCGTCTCTCGAAAG
ATAGAGGGCATGGGCCGGACTCAGAAGAGGGTAACAGGCGCCGTGCTGGC
AGCGGTCCTGGCCTCAGGGGGTTTCTTCCTTGTGGTGCCGGCGATCCTGT
TCCTCCCAGTCACCCTCATCTTGCTAGGGGGGttcttcttctgctcctTT
TTGGCGCTGCCTGTCCTGACGAGTTTTATGTGGGTGTTGGTGTGCACCAA
GCCTGTGCAGTCCAAGGTGATAGGGCCGCTGGTCGAGAGGCTGCTCCGAT
ACGAGACGGTTAAGAAGGTACTGACCAGTGAGTGAGGGGTGTACGACCCG
GAAGAGGTGCGGAGAAAATGTGGAGTATTGTACGGACAGAACGACACAGC
GCCTTGCGCGGATTATGCGTGGAGGGGCACGTTTGCTGCAAAAATGTtcg
tgggaagaggaggtgggcctGTAGCTCTCCTCGCACCCTTTCTCACCGTT
TCCTGGGGGCTTTGGCGCTACAAAGTGACATATTTTCATTTCGTACTTTG
GTGTTGAAGACCGGAGTGACTTGCTCGCTGTGGAGGACCAAAGTTGTGTG
AGCTCAAGACGGCTACGAATTTCACGTCAAGCAGATGCCATAAATTTTTG
AATTAAAAACGTGTGACGGCAGATTCC back to topCoding sequence (CDS) from alignment at CM002459.1:439352..441278+ >rna2461 ID=rna2461|Name=rna2461|organism=Nannochloropsis gaditana|type=CDS|length=3456bp|location=Sequence derived from alignment at CM002459.1:439352..441278+ (Nannochloropsis gaditana)
ATGAGTCCTCTTACCGGCAGACTCCAATCCGCCAACCCTCAGCAAGCCAG
CATGCCGAGGAGTACGATGGGTCGTCTGCGAGTCCGTCTCAACCGTGCGC
GCAACCTCAAGGGTCCTGAAATCCTAGGCATGAGTAACTGCCTGGTCGTT
TTCACATATGAAGGAAAACGGGAAGAGAGCTCTGTTAAGGTGAATGACAT
CGCCCCTGCCTGGCATGAGGAAGTGACCTTCGACAAAGTGCCTTACCCCC
CTTCGTCCAAGATATCCATTACCATTGTCTATCGCTCCGGGAAGACGGAC
GAAGTCTTGGGCGTGGCATGCCCCGGATCCAATTTATGGACGACCGGCAA
TGCGCCCCCCCAAGATCGCTGGCTACCTATTGCAACGAAAGAGGGCATTT
ATGCCGGTGAATTGAACTTCCACATTCACTGGACGAAGACGGAAGTCCAG
TACCGCCCCGCTGTCCGCCTCCTACAGCGGGGAGTCCTGAAGACTCAGGA
ATTTACGCGCCCTTTAGAGCCTGCGTTGGAGAGAGCGATGGCGTTGACAA
GTGGGATTGGTTCCACCGTCTCTCGAAAGATAGAGGGCATGGGCCGGACT
CAGAAGAGGGTAACAGGCGCCGTGCTGGCAGCGGTCCTGGCCTCAGGGGG
TTTCTTCCTTGTGGTGCCGGCGATCCTGTTCCTCCCAGTCACCCTCATCT
TGCTAGGGGGGttcttcttctgctcctTTTTGGCGCTGCCTGTCCTGACG
AGTTTTATGTGGGTGTTGGTGTGCACCAAGCCTGTGCAGTCCAAGGTGAT
AGGGCCGCTGGTCGAGAGGCTGCTCCGATACGAGACGGTTAAGAAGGTAC
TGACCAGTGAGTGAATGAGTCCTCTTACCGGCAGACTCCAATCCGCCAAC
CCTCAGCAAGCCAGCATGCCGAGGAGTACGATGGGTCGTCTGCGAGTCCG
TCTCAACCGTGCGCGCAACCTCAAGGGTCCTGAAATCCTAGGCATGAGTA
ACTGCCTGGTCGTTTTCACATATGAAGGAAAACGGGAAGAGAGCTCTGTT
AAGGTGAATGACATCGCCCCTGCCTGGCATGAGGAAGTGACCTTCGACAA
AGTGCCTTACCCCCCTTCGTCCAAGATATCCATTACCATTGTCTATCGCT
CCGGGAAGACGGACGAAGTCTTGGGCGTGGCATGCCCCGGATCCAATTTA
TGGACGACCGGCAATGCGCCCCCCCAAGATCGCTGGCTACCTATTGCAAC
GAAAGAGGGCATTTATGCCGGTGAATTGAACTTCCACATTCACTGGACGA
AGACGGAAGTCCAGTACCGCCCCGCTGTCCGCCTCCTACAGCGGGGAGTC
CTGAAGACTCAGGAATTTACGCGCCCTTTAGAGCCTGCGTTGGAGAGAGC
GATGGCGTTGACAAGTGGGATTGGTTCCACCGTCTCTCGAAAGATAGAGG
GCATGGGCCGGACTCAGAAGAGGGTAACAGGCGCCGTGCTGGCAGCGGTC
CTGGCCTCAGGGGGTTTCTTCCTTGTGGTGCCGGCGATCCTGTTCCTCCC
AGTCACCCTCATCTTGCTAGGGGGGttcttcttctgctcctTTTTGGCGC
TGCCTGTCCTGACGAGTTTTATGTGGGTGTTGGTGTGCACCAAGCCTGTG
CAGTCCAAGGTGATAGGGCCGCTGGTCGAGAGGCTGCTCCGATACGAGAC
GGTTAAGAAGGTACTGACCAGTGAGTGAATGAGTCCTCTTACCGGCAGAC
TCCAATCCGCCAACCCTCAGCAAGCCAGCATGCCGAGGAGTACGATGGGT
CGTCTGCGAGTCCGTCTCAACCGTGCGCGCAACCTCAAGGGTCCTGAAAT
CCTAGGCATGAGTAACTGCCTGGTCGTTTTCACATATGAAGGAAAACGGG
AAGAGAGCTCTGTTAAGGTGAATGACATCGCCCCTGCCTGGCATGAGGAA
GTGACCTTCGACAAAGTGCCTTACCCCCCTTCGTCCAAGATATCCATTAC
CATTGTCTATCGCTCCGGGAAGACGGACGAAGTCTTGGGCGTGGCATGCC
CCGGATCCAATTTATGGACGACCGGCAATGCGCCCCCCCAAGATCGCTGG
CTACCTATTGCAACGAAAGAGGGCATTTATGCCGGTGAATTGAACTTCCA
CATTCACTGGACGAAGACGGAAGTCCAGTACCGCCCCGCTGTCCGCCTCC
TACAGCGGGGAGTCCTGAAGACTCAGGAATTTACGCGCCCTTTAGAGCCT
GCGTTGGAGAGAGCGATGGCGTTGACAAGTGGGATTGGTTCCACCGTCTC
TCGAAAGATAGAGGGCATGGGCCGGACTCAGAAGAGGGTAACAGGCGCCG
TGCTGGCAGCGGTCCTGGCCTCAGGGGGTTTCTTCCTTGTGGTGCCGGCG
ATCCTGTTCCTCCCAGTCACCCTCATCTTGCTAGGGGGGttcttcttctg
ctcctTTTTGGCGCTGCCTGTCCTGACGAGTTTTATGTGGGTGTTGGTGT
GCACCAAGCCTGTGCAGTCCAAGGTGATAGGGCCGCTGGTCGAGAGGCTG
CTCCGATACGAGACGGTTAAGAAGGTACTGACCAGTGAGTGAATGAGTCC
TCTTACCGGCAGACTCCAATCCGCCAACCCTCAGCAAGCCAGCATGCCGA
GGAGTACGATGGGTCGTCTGCGAGTCCGTCTCAACCGTGCGCGCAACCTC
AAGGGTCCTGAAATCCTAGGCATGAGTAACTGCCTGGTCGTTTTCACATA
TGAAGGAAAACGGGAAGAGAGCTCTGTTAAGGTGAATGACATCGCCCCTG
CCTGGCATGAGGAAGTGACCTTCGACAAAGTGCCTTACCCCCCTTCGTCC
AAGATATCCATTACCATTGTCTATCGCTCCGGGAAGACGGACGAAGTCTT
GGGCGTGGCATGCCCCGGATCCAATTTATGGACGACCGGCAATGCGCCCC
CCCAAGATCGCTGGCTACCTATTGCAACGAAAGAGGGCATTTATGCCGGT
GAATTGAACTTCCACATTCACTGGACGAAGACGGAAGTCCAGTACCGCCC
CGCTGTCCGCCTCCTACAGCGGGGAGTCCTGAAGACTCAGGAATTTACGC
GCCCTTTAGAGCCTGCGTTGGAGAGAGCGATGGCGTTGACAAGTGGGATT
GGTTCCACCGTCTCTCGAAAGATAGAGGGCATGGGCCGGACTCAGAAGAG
GGTAACAGGCGCCGTGCTGGCAGCGGTCCTGGCCTCAGGGGGTTTCTTCC
TTGTGGTGCCGGCGATCCTGTTCCTCCCAGTCACCCTCATCTTGCTAGGG
GGGttcttcttctgctcctTTTTGGCGCTGCCTGTCCTGACGAGTTTTAT
GTGGGTGTTGGTGTGCACCAAGCCTGTGCAGTCCAAGGTGATAGGGCCGC
TGGTCGAGAGGCTGCTCCGATACGAGACGGTTAAGAAGGTACTGACCAGT
GAGTGA back to top
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