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Properties
| Property Name | Value |
|---|
| Product | gtp-binding protein sar1 |
| Orig transcript id | gnl|cribi|Naga_100004g84.9104.mrna |
| Orig protein id | gnl|cribi|Naga_100004g84.9104 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:407064..409115 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2448 ID=rna2448|Name=rna2448|organism=Nannochloropsis gaditana|type=mRNA|length=3691bp
CATGCACAATCACAAAATTGGCAGATTGCCGTTGCACCTTCCATCCATGC
TGTCGCCGCGGTGATATATCACAGATCGTGGAGGGGCGCTCTATCATTAG
CCGACACAACCCCCTCTCCACTTCGGAGGGCAACAACAATAGCATTGACC
GGGTGATAAACAGGCTCGCGTTGACCGGGGTACACGATCCAAATGAGGTT
TGGGCATGCATCGTCGGCCGTGTTGCCTCATCAAAGACGGATACCCTGTG
GCCTTGTCGTACTATTCTGGACTTGGTGTGCTTGGGAAACGTTGCAGGTG
CATGGATGGTGCGATATCCGGCTGGGAGTGAGACAGAGGCATGCATCCCA
CGAGCCACGGCTCGCGTCCTTCCCCCCCCCTCCGAGCTCGACAGCCTGGG
CCTTCCCCTCCTGGCGGCGCAGGAGAAGGGACAAAAATCTTGGGTACTCG
CTGCTTGAAGGCGGTGGGAAGCCCTCGACTAGTGTTCTGTTCGCAGAGGC
CGGCATTGAGAGTAATGGAGAGGGCCGGGGGGGCGTGGGTAAGAACCGCA
CGAGCAGGACAAGCGGCGGCCACAGCTCCCACCACGGAAGGCACAGGGGG
GAGTCGCGAAGGCAGGGTGGTGCACGCAAGAGTGGAAGACATGTGAGGCG
TGGGTATGCCCGGCAAGAACCATGTCCTACGGGATCGCCATTGGGAGGCG
ACGAGGACGTTGTACATATCGGAAGAGGGGGCCCTCGTGGCAGCGGGAGG
CACGGGGGGGGGGGCGAGGCCGTGAGCATGGCGATTTCCCACCGTCAGAC
TCGATCGTCCAAGAAGGGTCTGCCATGCACAGAGCTCCTGGGACAGGGGG
TGCCCGGGCGTCGGGAGAGAGCGGTCACGGGCGAGGGCCCGGGACGGATC
AGGGCGGTGCCCCAGACGCTCGGCCGGGGGATACGGGCGGACCTCGTCCT
CGCCCCCAACAGCAAGAGCGGGGGAAGCATGTCTCCCTGGACCGAGGCGC
TGGGTCGGCCTCGCCTCTTTCTCGCGCGCAGTCCTTGCCCCCCTCCCCTT
CCCCGCGGTCCTCCACCTCCCCCCCGGCCGCGTCGCGGCCCGCCCGTCCC
GAGCCTCCTCGAGAGGAGGACGCCGAAGCCCTCTCCGATTTCGCCCGCCT
CTGCAAGGCCCTGAGCATGAGCGCGAAAGACTACCCGGGCACGGACGAGG
GCCTGGCCCTTGTCTTCGGGCCCGACACCCTCGCCCTCTCCTCTCCTCCT
CCCTCGCTCCCGCTGCGACCCGCTGGGAAGGCGAGCGGCTTCGGCGAGCG
CATCTCCAGCCCCGGAAGGACGGCTCGCGCAGGGCCTCCCCCTATCCGCC
TGCCTCTGACCAACGAGGTCACGGAGATGGAGGCCCAGGCTGCGGAGGCC
GCCGCGGGCTCAGGCCCTCCAGCCCCCCCTCGGGGCTATGGAGGGGAGGA
CGGCGGGGGCAAGAAGGAGGCGCCGCGGAGGGTGCCAGCCCGGAGTGTGT
ACGGCGCCTTTTACAAGCACAGGGAGGGGCGGGACCGCGAGGCGCCAGAT
GCGGGGAGGCCCCGGGGCTCCTTGGGGGGGCGTCTCAGCTTGTCCAGCCC
CAGGGTGCAGCAGCAGCGGTGGAAGGAAGGGCGATTGCAGGAGGACAGCG
AAGGGGAGGGGCTCGGGGAAGGAGAAGAGGAGGAGGGGCGGGTGGGCGAG
GAAGTGCTTGCGCCGATGGAGTCGCTGGGGTTGCGGAAGCGGCATCCACC
GGCAAGGACGGCCGCGGCCGGTGATCGCGGAGCACGGCACCGAGGCGGGG
AGGGAGACGGTGGGGAGGGAACGGAGGGCAGGGCGCCATGGCAGGGGCGG
GAAGAAAGCGGGGAGAAATGGGGGAGAAGCGGCGAGTTGGGAGGGGAGGC
AGCAGCGGACGAGGACGAGGAAGCGAGCGACGAAGAGGACTTGGCGCTGG
CGGGGCCGGGGCCGGGGGGCGGGGGCCTGAAGGGCAGGAGGAGGGGCAGC
GGCCCGGCGCCCGTGGACCCGGCGAGGACGGAGGAGAAGGTTCTGCGCGA
CTGTCGGGTGGTGTCGAGCCACATCAAAGACGCCAAGCTTACGGAGTACA
TCAAGGACAAGAAGAAAGCGCGCTCGAGCCGGGACCGGTTCCTGGCGGAT
ACGGGGCTGGTGCGTTCCGAGGTCCACCCCCCCCAGCGGTTCATCGAGGT
GTATTACAACAGCTGGGCGGACGACTTCTACACGGCCATCACCACATCCT
CGGCCGCCTTCGGCCCTCGGTGGTGGTTTCGGGAGGCGCTGGGGCAGGAG
CCGCAGGAAGTGATGGCGTGGGTGAGAGAGTGGGAGGCTCAGGCCCGGAA
GCACCAGGTCCTGAGCGAGGGAGTGGGGGAGGTGCTGAAAGAGGCGATGG
CGGTGGGAGGGGCGGAAGAGGGCAACCCAACCGTGGAGATGGAGCGATTC
TTGGCGCTGAAGGCACGATTGAGGGAGCGGAGGGAGCCCAAGATCATCGT
CATCGGCGACGTGCACGGCTGTGTGGAGGAGCTCCGGGCGTTGATCAAGA
AGGTGGAGTACAGCCCCGGGGACCTGCTCGTCTTCCTGGGGGACATGGTC
GCCAAGGGACCGGACTCCATCCCCGTGATCCGCCTGGCCAGAGAGGTGGG
CGCGCTCTCCGTGCGGGGGAACCACGAGAACGAGGTCATCCGCTGGAGTC
GGGCCTTGGCCCTAGGGGCGCAGAGCAACTTCAAGTCGGAGCACTACTTG
ATTGCGATGGGGCTGGAGGACGCGGACGTGGAGTGGCTGCGGAACTTGCC
CTGGTACATCTCCTGCTCGGACCTCCAGCTCCTCTTCGTCCACGCCGGCT
TCGTCGCCGATCAGCGGCTCAGCAAGCAACATCCTCGCTTCATGATCAAC
ATGCGATCCATCCTGGCGGACGGGACGGTCAGTGCCCGCTACTACCAGGA
CTACCCATGGGCGAGGACGTGGCAGGGGCCGCAGACGGTCCTGTTCGGGC
ACGACGCGCGCAGGGGCATGCAAGAGTACGAGCAGGCGCTGGGTCTGGAT
ACCGGGTGCGTGTATGGAGGCAACCTGACGGCCTGTATCTTGCCGGGCAA
GGAGCTAGTACAGGTACCTGCGGCGGAGCCGTACATAGTGAATCGGTACG
ATCGCATTATGAAGCGTGCCCGGGTGTTGCAGAAAGAGGGCGTGGGGGGA
CGGCGGTGGACTGATGGCGAGGAGATGGACCTGGAGGAAATAGCAGCCGG
GGAAGGCATGGAAGGGGATGAAGACGGAGGCACGGAAGGAGAACAGGGGG
GGCGTGGGAGAAGACAGTAGGAGTCGGTCGAAAGAGGGCGTGGACGACCA
GTGTAAGTACTGCCAACATGTATCACAAGAGGATGCAGCCTGGGCTTCGG
GAGGGCGAAGGAGAGCCGGCGTTGTGTCCCTCGGTGGCGTTCGGAAGGGC
GCACGGGGGATAACACGGTCATGCTTCGACTCGTAGGGGCTCTATTGGCT
CCAGGCTGGCCTCATACGCTAGTGGTGCGATCAGTAGACCACTAGGTCAC
CGAACAGGCAAAAGGTCATGCTAACTGCGGCAGCAAGAGCAGTAGCAGCA
ACGGGAGGCAGTCTCCCAACATGAAAGCAACGCTCGACACGACACACGAA
TAAAAAGTGTCACGAAAAACACACCAGCGAGTAACTCCCGC back to topprotein sequence of rna2448 >rna2448-protein ID=rna2448-protein|Name=rna2448|organism=Nannochloropsis gaditana|type=polypeptide|length=192bp
MFLLDWVYSALASLGLYHKSAKILFLGLDNAGKTTLLHMLKENRVQVHQP
TIHPNTDELIIGKIRFKTFDLGGHETARRLWKDYLTTVDGVVFIVDALDQ
ERFPEAKRELDSLLTSDELAHVPFLVLGNKIDVPRAVSEEQLRYALGMQN
TYGKDSSGGEKQPGVRPIELYMCSVIKRMGYADGFKWLAQFL back to topmRNA from alignment at CM002459.1:407064..409115- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2448 ID=rna2448|Name=rna2448|organism=Nannochloropsis gaditana|type=mRNA|length=2052bp|location=Sequence derived from alignment at CM002459.1:407064..409115- (Nannochloropsis gaditana)
GGTGGCCAATAAGTTGCGGGCGCCGCCTCACATCCATCATTTAAATCAAT
TCAATGTTTCGCCAGTTGTAGTGTTGTGAGACCTCGCGCGTGCAGGCACA
GGTGGTGTCCTAAGAAGGCTTCGCGGCAACCCCTCCTCGTCGGGAGTAAC
GGACACGAGCCCTCTGCTTCCAGCGTACCCATCCCGCGCTGTCCACGACG
CAGTAATGTTTTAAGCCGGCACCACTCTCCAATTGTGCTTTTCACTGCCT
TTCATGGGTTCACATCGTCCAGAAACCACGTGGGACTCGGTGAACTTGAT
CGGCAGGAGCCACCGGAATGGTCGATAATACTCAGTAGCTGACGAGCGAA
GCAACGAATTCCACAAGAAGGATCGACTCAAGCTGTAAACATTTTTTTCC
CCACGCATGCACACAGGGACGACAGCGCGGGCCGATACAGGGCAGTTTAC
GAGCTCCGAGCCGTCAAGTCGGGCCCAATCACATAAGGAGCAGGAACGGG
AGCTGCAGCCATGTTCCTCCTTGACTGGGTGTATAGTGCGCTCGCCTCAT
TAGGTAAGCGCGTCCGGTAGCATTTCATTTGACCAAAGAAATACTGTCTT
TCTCAGTAAGGACACGACATGAAGCATGCATTTGCCTCGTATTCATCCGA
GAGGCTGACGGGTCGGATGAATACGAGGCGACCCAGTCTGCCTCGGTTTT
GGTCGCGGTCATCCCAGTCCCTTGCTGCCTTTTCAATCATACGTATTCGT
TTGGTCGCGTGCATTGCGCTCCTTACCCTCATTTCTGTGACATTGCGAGA
AAGTTTTTAATTTGAGTTAAGTGCTTCCCGCCCCTTCTGTTCATCTGGCA
GGCCTTTATCACAAGAGCGCCAAGATTTTGTTCTTGGGCTTGGACAATGC
CGGGAAGACGACGTTGCTGCACATGCTTAAAGAAAACAGGGTTCAAGTCC
ATCAGCCCACTATTCACCCGAACACGGACGAGCTCATTATTGGTAAAATT
CGATTTAAGACGTTTGACTTGGGCGGACACGAGACGGCGCGCCGGCTATG
GAAGGACTACCTTACCACCGTGGATGGTGTGGTGTTTATAGTAGACGCTT
TGGACCAGGAGCGTTTCCCCGAGGCCAAGCGTGAGCTAGATGTAAGTAGT
CGATTTTGAGAGCGTCTCATGATACTCGGTTCCTCATATGTCTTCCTCCT
GTTTCTTCCTTCCTGGGTCGAACGTCGACAGAGCCTCCTCACGAGCGACG
AGCTCGCTCACGTCCCTTTCTTGGTGCTCGGAAACAAGATCGACGTCCCT
CGCGCCGTCTCAGAGGAGCAGCTTCGATATGCGCTTGGCATGCAGAATAC
GTACGGAAAAGATTCTTCAGGCGGGGAGAAGCAGCCGGGCGTACGGCCTA
TCGAGCTGTACATGTGCTCTGTGATCAAGCGGATGGGGTACGCGGACGGC
TTCAAGTGGCTGGCGCAGTTCCTGTAAATTTATGGGCATAAGGGACGGCA
GGTGGGCAGGCGTGGCAAATGATAGGGAGAGGATTCAGTGGGCGACTCGC
TGTCGGTCGGTCGAGGCGAACGGACGGAGCAAGTGGGGGCCGGAGCCGGT
TTGGAGTGCTTGGAAAGTGGGGGGGAGAAGATAGGGTGGAGAGCAGGTCG
CAGAGGACGAGCGGCGGGGAATGAGACCCTTGCAAGGTCTTCAGGCGTGC
ACACTGACCGCCCTGTCTCCAGTGGGATGTTTGGTGGAGGCGCACAACCC
GTCGCGCGGGTATGTATGGAACCTTGGTCCTCTGCCGTACTTCCAGTCGC
TCTCTTTTCCTGTCAGGGCAGGAGTTTTGTCTTATCGAGAGGTGGGAACA
GGAAGGGAGGGGTTGGCTTGATAGTGGAGGGATATTGGGGCACGTTGTTA
GGCGAGGCAGGCTGAGTGCAGAAGGGGGAAGAGGAGGGGAGGCCGAAGGG
ACAGGGTGAGATGTAAGACAGGACAAGGCAGGCCTGGATTGAAGATAACG
CCGAAACAACAAGATGAAATGGAGAGCAGCGGGAGTTACTCGCTGGTGTG
TT back to topCoding sequence (CDS) from alignment at CM002459.1:407064..409115- >rna2448 ID=rna2448|Name=rna2448|organism=Nannochloropsis gaditana|type=CDS|length=1737bp|location=Sequence derived from alignment at CM002459.1:407064..409115- (Nannochloropsis gaditana)
AGCCTCCTCACGAGCGACGAGCTCGCTCACGTCCCTTTCTTGGTGCTCGG
AAACAAGATCGACGTCCCTCGCGCCGTCTCAGAGGAGCAGCTTCGATATG
CGCTTGGCATGCAGAATACGTACGGAAAAGATTCTTCAGGCGGGGAGAAG
CAGCCGGGCGTACGGCCTATCGAGCTGTACATGTGCTCTGTGATCAAGCG
GATGGGGTACGCGGACGGCTTCAAGTGGCTGGCGCAGTTCCTGTAAGCCT
TTATCACAAGAGCGCCAAGATTTTGTTCTTGGGCTTGGACAATGCCGGGA
AGACGACGTTGCTGCACATGCTTAAAGAAAACAGGGTTCAAGTCCATCAG
CCCACTATTCACCCGAACACGGACGAGCTCATTATTGGTAAAATTCGATT
TAAGACGTTTGACTTGGGCGGACACGAGACGGCGCGCCGGCTATGGAAGG
ACTACCTTACCACCGTGGATGGTGTGGTGTTTATAGTAGACGCTTTGGAC
CAGGAGCGTTTCCCCGAGGCCAAGCGTGAGCTAGATATGTTCCTCCTTGA
CTGGGTGTATAGTGCGCTCGCCTCATTAGAGCCTCCTCACGAGCGACGAG
CTCGCTCACGTCCCTTTCTTGGTGCTCGGAAACAAGATCGACGTCCCTCG
CGCCGTCTCAGAGGAGCAGCTTCGATATGCGCTTGGCATGCAGAATACGT
ACGGAAAAGATTCTTCAGGCGGGGAGAAGCAGCCGGGCGTACGGCCTATC
GAGCTGTACATGTGCTCTGTGATCAAGCGGATGGGGTACGCGGACGGCTT
CAAGTGGCTGGCGCAGTTCCTGTAAGCCTTTATCACAAGAGCGCCAAGAT
TTTGTTCTTGGGCTTGGACAATGCCGGGAAGACGACGTTGCTGCACATGC
TTAAAGAAAACAGGGTTCAAGTCCATCAGCCCACTATTCACCCGAACACG
GACGAGCTCATTATTGGTAAAATTCGATTTAAGACGTTTGACTTGGGCGG
ACACGAGACGGCGCGCCGGCTATGGAAGGACTACCTTACCACCGTGGATG
GTGTGGTGTTTATAGTAGACGCTTTGGACCAGGAGCGTTTCCCCGAGGCC
AAGCGTGAGCTAGATATGTTCCTCCTTGACTGGGTGTATAGTGCGCTCGC
CTCATTAGAGCCTCCTCACGAGCGACGAGCTCGCTCACGTCCCTTTCTTG
GTGCTCGGAAACAAGATCGACGTCCCTCGCGCCGTCTCAGAGGAGCAGCT
TCGATATGCGCTTGGCATGCAGAATACGTACGGAAAAGATTCTTCAGGCG
GGGAGAAGCAGCCGGGCGTACGGCCTATCGAGCTGTACATGTGCTCTGTG
ATCAAGCGGATGGGGTACGCGGACGGCTTCAAGTGGCTGGCGCAGTTCCT
GTAAGCCTTTATCACAAGAGCGCCAAGATTTTGTTCTTGGGCTTGGACAA
TGCCGGGAAGACGACGTTGCTGCACATGCTTAAAGAAAACAGGGTTCAAG
TCCATCAGCCCACTATTCACCCGAACACGGACGAGCTCATTATTGGTAAA
ATTCGATTTAAGACGTTTGACTTGGGCGGACACGAGACGGCGCGCCGGCT
ATGGAAGGACTACCTTACCACCGTGGATGGTGTGGTGTTTATAGTAGACG
CTTTGGACCAGGAGCGTTTCCCCGAGGCCAAGCGTGAGCTAGATATGTTC
CTCCTTGACTGGGTGTATAGTGCGCTCGCCTCATTAG back to top
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