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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100004g78.9078.mrna |
| Orig protein id | gnl|cribi|Naga_100004g78.9078 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:397849..399031 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2443 ID=rna2443|Name=rna2443|organism=Nannochloropsis gaditana|type=mRNA|length=4107bp
TACCCACAGACCTCATTCCGGACCTAAATCATCTTAATTATCAGAATATT
CATTTTATGGGCAAAATGCATATTTGCAACCATCCATCCAGGCAGCTTCT
TCCCCGAGCCCGTCGTCTCCTTAACTGCCATTCCCGTCTCTTCATACTGC
ACACAGAAACGAAATGTCCTCCGCGAACGAATACCTATTTTTTGCTACGC
AAAGGAGTGAGCTTGCTGAAAATGTTTCCTCGGCGACAATGGTATAGGGC
GCAATATCAAGCCCTCACATCATGGAATTCTTGCATGCGAGATCTAGTGC
TAGTGAAATCACGGACCGCAGCAATCTCGTCAATTTCTAATTTGAGGTTT
ACCGCTCAGGGGCCATCTCCACCGACTAATGTGCCACCGACACCGCGTCG
AGATGCAGGCAGCGACCCATACGCATGGATGGAAAGTCCGAGGAGTCAAG
AAATGCTCGTGTACTTGAATGCCGAAAACGAATATGCACACAAAGCTATG
CAGTCGACGCATCGGTTGCAGGACAAGTTATTCCGCGAGATGTATACCTT
CTTTCAGTCCAATCGGGCGAAACATCTACAATTTCCTGAAAACGGAGGAG
ATGGATACCTGTACTACTCCAGACGGTCCCGAGGGCACAATTTCCCCGTC
TATTACCGACGTCGTCACGGCCAGCCAGATGGAGACGACGGGTTCGAGAC
CGTCCTGCTGGACCAAAATATCATGCCAGATTTCTTTCAACGCCAGCTTC
TGGGGGACCTGAAAGTGGTTTCACTCGGAGGAGACGGAGGCTCGTGCCTG
GTGGCCTTCACCCTGCTCTCTCCAGACGCCATGAATCGGGGGGGGAATCT
ATATATCAGGGTGGTTGACACCGACACCAGAGTCCGACCCTCTGGTCCCC
CCTTCTCCTTCTACTCATCGCCTTCGACCTCGTCCTGGTGGACTGCCAAT
GGGGAGGCGTGGACGGGTATCGGGGGCTTCGAGTGGGGCCCTCGGGAAGG
AGGGGGAGATCGAGCAAGACGCACACTATACTATACCAAAGTAGATTCTT
ACGGTCGACCGCACCAGGTGTGGGCAGTGCAATTAACCGAGGAGGGTGAC
AAGCTTCACGGCGCGCCACGTTTGCTGCACTCGTTGAGGAGGGAACAAAA
GGCTGTCTTCTTATCTTTGGCGGCGACGAAGGATAAAATGTTTGTGACCG
TTTCCGCTAACTCGAAGAGCTCCTCCGAGGTGCACTTACTGCCCGGCCCT
GGCGGGAGAGAAAGTTGTGCGCTGCTGGAGCCGCGGCTGTTTCGAAAGAG
ACAATCGGGGGTCCAGTATTTTGTGGATCATGGCGGAGGTTTCTTCTTTG
TTGTGACCAATGCGAGGGTGACGGGCGCAGGAAAAGGGAATGACGCGGCA
TCGCGAACGGAGCCTGGTGAATACCGTCTTATGCTCTGCCCCACGGCCGA
CACGAGCCAATGGACGCCCTGCTCTTTCGCTGAGACGACTGAAGCTTGTG
GCGATGTCGTTATGGGCCGCGGCGGTAGTCAAGACAAGGGGGGCAGCATT
GAGGACATGGATCTCTTCCACGACCACTGCGTCCTGTACGGGCGCGTCGG
GGGTGTACCGGCCCTTTACGCCCTTGACCGTCTCCACACGACCCCGTCCT
CGTTACCCTCCCCCCCGTTCTCTTCCTTCCACCGCCTCTCTCTCCCTTCC
GAGGCTGAGACCGGCCGGCTTGAGCCGGGCCTCAATCAAGACTACCGCGC
GCACGCCCTGCGTTTTTCCCTCTCGTCGCCCATAATTCCAGACGTGACGT
ATGAATACGACCTGAAGACACGATACCTGCGGGAGTACCATCGAGAGATT
CTACCCAGTCGCCCCCCCCTCCGTGTACAGGGCAACTCCGGGTCGGGGGC
GCAGGAGGGGCAGGAGGCGTATGAATGCCAGCGACAATGGGTCAAGAACG
ATGACGACCACATGCTCATACCCTTAACGGTCGCCAGACGTCGCGGCCTG
AAGGGACCCTTGCCCACTTTGCTTCTGGCCTACGGTGCCTATGGAGTCTC
GCTCGACTTGAGCTTCCGCCCTGAGGTCCTTGCTTTGCTGAATCGCGGGT
GGGCCGTGGCCTACGCGCACGTGCGTGGAGGAGGCGAGCTCGGGCGGTGG
TGGCACACGCAAGGCAAGGGGCGGCGGAAAATGAACTCTGTGACGGACTA
TCTGTGGTGCGCCGAATGGCTGGTGCGAAGCGGAAGGTCGCGTCCCGGGT
GGCTGGTTGGCCATGGGTCCAGTGCCGGCGCCTTGGTCGTGGCCGGTGCC
GTACATCGACAACCCTCGTTGTTCGGGGCGATGGTCCTGAAGGTGCCCTT
CCTGGACCTAGCACGCACGATGATGGACCCCGCGCTGCCTTTGACAGTCC
ATGAGTACGAGGAGTGGACGGACGGGACAGACCCTAGGAGAGAGCCGGCG
CTCCAGGCGATGCTGCAGGCGTTGTCCCCGTACGATAGCCTGGGGTTGCT
CTCAACGCCCTATGCGGATTGGCGGCCAGAGAGTTCCCGCGGAGTCGCCG
ACAGCCCTGGTTCTGAGAAAGATTCATGCGATTTGCGGTCGTTCGAGTGT
AACAGCCTGCCGCCCACGCTCCTGCTCGCCTCCTTGGCCGATGCCCGCGT
GAATTACTGGGAGGCTGCGAAGTATGCTGCCAAAGCCCGGCATGTGTGCG
GGATGGAGACAGAGGTGCTCCTGCGCATGGAGGGTGACCGAGCCCACGAG
GGGCCGATAGCCCAGACGGAAATGCTGCAGGAAGCCGCTTTCGAGGCTGC
TTTCATGATCACAAGAGTGGGCCTGACGGAAGGAAGAGAAGATGTGATGC
AAAGGGGAACGGCTCAAAACGAAAGACGAAAAGGAACTGTGTGGAGAAGA
AGGGCGGGATATGAGATTTCTCGGCGTATGGGTCCTGTTCCACCGCTAGT
GTTTTGGTGACCGATGACTCTTTGACATTGTACAGCCTTGTTTTTACACG
AAAGAACTTGTGCACGAGAATTTTGTTATCTTCGCATCCATGTCGCGCCC
AAAAAGGGCCTGCAAAGAGTACTAGAACGAGGCTGGGGCCACAAAGCAAA
GGCGCTCGCCTGACTCGGGGTGGTCAAAGCATAGTACTTCTGCATGCAAA
TGGAGGCGGGCGTCGACATGTCTGCGTGTTGCGCCTTCGGGAGAGACGAT
GGGCGCTTTATTTTTCTCCTCGATTTCATAAACACAGCCAATATTTTCTT
GAAAAGGCTTCAGGAATGGCAGCATTTCGGACGGCTTCAGTCTGTCTTGC
AGTGAGTATATGCTGTCGCCAACTATAGGGTGACCTAGAGCCGCCATGTG
GACCCGCAGTTGGTGGGTCCTCCCTGTCAGCGGCGTTAGCTCCACCCTAC
ATACCTCCTTATCTCCCATTCTCTGTGTGCCTAGCACGCGAAAGAGGGTC
CGGCAATCCTTTCCATCCTGTGCGTCTATCATCTGCTTGGGACGTGTCTC
TCTATCCGGGCGGATGGGCAAAAATATCTCTCCCTGGTCCTGTGGCCATT
GCAAATTACTGTCGACTAAAGCGATATATCTTTTGGTAACTCTCTTCTCT
CGAAATTGTGTGCTAAGGCTTCTTGCAGCTTCAAGAGTGCGGGCTAGAAC
ACAGACTCCTGAAGTTTCGCAATCCAAGCGATGTACTGTCTTGATCACTT
GAAAGACATGGAGCAAGCGCGTCTGAACAGAATCAGCGCGTTGGCCCTCC
CTTGCCTCAAAAGCCCGATTTAAGCATTCGTACAGCACTACTAAATCTTC
ACGCTCCGCCTTCAAGGTACGAAGGCCCCAGTCTAGAAATGTTTGCCGTT
TACGAGGTACTGAGGATTTGTGTGCCATCAGGCTGGCGAAATATTGCGCA
AGATGGGAGTCCGCAGGCATGTTCATGGATTGTTCCAGAGAAATACGATC
CTGTGTAAGCATATCCATCCAAAGTTCCTGGTGCGTACGTTCACGTTTCT
TGCTCATAAATTGCTCAGTGCTTGATCTTATATCGTTCGTGTCTTGAGCA
GCGCCTCGAGTTGATGAGCTTCCTGATCCATTGGGGTTTATGGTTTCTTC
TTTCACC back to topprotein sequence of rna2443 >rna2443-protein ID=rna2443-protein|Name=rna2443|organism=Nannochloropsis gaditana|type=polypeptide|length=243bp
MADRKACGWRTAVGGVAVALAIVNQACAFVRPAFLHASTNVIHSVARDQV
REKGVRTVRTRGLSSAQLQDGMHGTGSRFLSIQQLKGDELMPRIIPVAGV
YPGITADELMAPTSTPSPSYGRWAYEFSDPDGPQVGTVAFPASTLVHACV
DPVVVIATNDALGIDLAGEHDIEAMVLVDRGDRFFQTNKFYAFAAPDGSV
VMRWFEQVPAGWVLLGRVHYVTLPYTEKTGRFKSGWMEVDEDD back to topmRNA from alignment at CM002459.1:397849..399031+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2443 ID=rna2443|Name=rna2443|organism=Nannochloropsis gaditana|type=mRNA|length=1183bp|location=Sequence derived from alignment at CM002459.1:397849..399031+ (Nannochloropsis gaditana)
CATAGTATCTTATTTTTCTTATTGGCACAGTTTCAGGAGATTTGTAAAAG
GCATCGTTGCAGTGGTGCCTCATGGCCGATCGAAAAGCGTGTGGGTGGCG
AacggcggtgggaggagTTGCTGTTGCCCTTGCCATCGTCAATCAGGCGT
GTGCCTTCGTCCGACCTGCCTTTCTACATGCAAGTACCAATGTCATACAC
TCGGTGGCAAGAGACCAAGTcagagagaagggggtgagGACTGTACGGAC
GCGAGGGCTGTCCTCAGCTCAATTGCAGGTACGAACGAAGGCGACCTAAA
CTTGTTCAGCCAGTGTCCTTAAACCAGTGTTCGGAGGCCATTTGCACATT
TTTAGCGAGTACAATACAGCTGAGAAAGTCATCAATATCCCACTATAATC
TATATGACACTAGGATGGGATGCATGGGACTGGTTCACGTTTTCTTTCTA
TCCAGCAACTCAAGGGGGACGAGCTCATGCCTCGAATCATTCCTGTTGCG
GGCGTTTATCCCGGAATTACCGCGGACGAATTGATGGCGCccacttccac
cccttccccctcctatGGTCGCTGGGCCTATGAGTTCTCTGACCCGGACG
GCCCACAAGTGGGCACTGTggcctttcccgcctctACTCTGGTGCATGCC
TGCGTGGATCCTGTTGTGGTAATTGCCACCAACGACGCCCTGGGCATCGA
CCTGGCGGGGGAACACGATATCGAGGCGATGgtgcttgtggaccgagggg
aCAGGTATGTGGTAATGCAGTGAAAAGGCTTGTGCACGGCAGTTCGGGGG
TAATTCGATGAGGCAATGGAGAGACCGGCCACCCGCCTGGACTGCATCCT
CGCTCCCacgcctctcccctttcttccaacCAGATTTTTCCAGACAAACA
AATTCTATGCATTTGCCGCCCCGGACGGCTCCGTGGTCATGCGTTGGTTC
GAGCAGGTCCCGGCGGGCTGGGTGCTGCTCGGAAGGGTCCATTACGTGAC
CTTGCCGTACACGGAGAAGACAGGAAGATTCAAAAGCGggtggatggagg
tggatgaggatgattaaggggaggatggagggtaCTGAGGGCAACGGATA
TTCTGCACTGAGTGAGCGAGGGCCACAAAGATCAACATTAGCAAGCCGCT
CGCGGGCAAATAGTCTTACACAACTGGCTATTC back to topCoding sequence (CDS) from alignment at CM002459.1:397849..399031+ >rna2443 ID=rna2443|Name=rna2443|organism=Nannochloropsis gaditana|type=CDS|length=2196bp|location=Sequence derived from alignment at CM002459.1:397849..399031+ (Nannochloropsis gaditana)
ATGGCCGATCGAAAAGCGTGTGGGTGGCGAacggcggtgggaggagTTGC
TGTTGCCCTTGCCATCGTCAATCAGGCGTGTGCCTTCGTCCGACCTGCCT
TTCTACATGCAAGTACCAATGTCATACACTCGGTGGCAAGAGACCAAGTc
agagagaagggggtgagGACTGTACGGACGCGAGGGCTGTCCTCAGCTCA
ATTGCAGGATGGGATGCATGGGACTGGTTCACGTTTTCTTTCTATCCAGC
AACTCAAGGGGGACGAGCTCATGCCTCGAATCATTCCTGTTGCGGGCGTT
TATCCCGGAATTACCGCGGACGAATTGATGGCGCccacttccaccccttc
cccctcctatGGTCGCTGGGCCTATGAGTTCTCTGACCCGGACGGCCCAC
AAGTGGGCACTGTggcctttcccgcctctACTCTGGTGCATGCCTGCGTG
GATCCTGTTGTGGTAATTGCCACCAACGACGCCCTGGGCATCGACCTGGC
GGGGGAACACGATATCGAGGCGATGgtgcttgtggaccgaggggaCAGAT
TTTTCCAGACAAACAAATTCTATGCATTTGCCGCCCCGGACGGCTCCGTG
GTCATGCGTTGGTTCGAGCAGGTCCCGGCGGGCTGGGTGCTGCTCGGAAG
GGTCCATTACGTGACCTTGCCGTACACGGAGAAGACAGGAAGATTCAAAA
GCGggtggatggaggtggatgaggatgattaaATGGCCGATCGAAAAGCG
TGTGGGTGGCGAacggcggtgggaggagTTGCTGTTGCCCTTGCCATCGT
CAATCAGGCGTGTGCCTTCGTCCGACCTGCCTTTCTACATGCAAGTACCA
ATGTCATACACTCGGTGGCAAGAGACCAAGTcagagagaagggggtgagG
ACTGTACGGACGCGAGGGCTGTCCTCAGCTCAATTGCAGGATGGGATGCA
TGGGACTGGTTCACGTTTTCTTTCTATCCAGCAACTCAAGGGGGACGAGC
TCATGCCTCGAATCATTCCTGTTGCGGGCGTTTATCCCGGAATTACCGCG
GACGAATTGATGGCGCccacttccaccccttccccctcctatGGTCGCTG
GGCCTATGAGTTCTCTGACCCGGACGGCCCACAAGTGGGCACTGTggcct
ttcccgcctctACTCTGGTGCATGCCTGCGTGGATCCTGTTGTGGTAATT
GCCACCAACGACGCCCTGGGCATCGACCTGGCGGGGGAACACGATATCGA
GGCGATGgtgcttgtggaccgaggggaCAGATTTTTCCAGACAAACAAAT
TCTATGCATTTGCCGCCCCGGACGGCTCCGTGGTCATGCGTTGGTTCGAG
CAGGTCCCGGCGGGCTGGGTGCTGCTCGGAAGGGTCCATTACGTGACCTT
GCCGTACACGGAGAAGACAGGAAGATTCAAAAGCGggtggatggaggtgg
atgaggatgattaaATGGCCGATCGAAAAGCGTGTGGGTGGCGAacggcg
gtgggaggagTTGCTGTTGCCCTTGCCATCGTCAATCAGGCGTGTGCCTT
CGTCCGACCTGCCTTTCTACATGCAAGTACCAATGTCATACACTCGGTGG
CAAGAGACCAAGTcagagagaagggggtgagGACTGTACGGACGCGAGGG
CTGTCCTCAGCTCAATTGCAGGATGGGATGCATGGGACTGGTTCACGTTT
TCTTTCTATCCAGCAACTCAAGGGGGACGAGCTCATGCCTCGAATCATTC
CTGTTGCGGGCGTTTATCCCGGAATTACCGCGGACGAATTGATGGCGCcc
acttccaccccttccccctcctatGGTCGCTGGGCCTATGAGTTCTCTGA
CCCGGACGGCCCACAAGTGGGCACTGTggcctttcccgcctctACTCTGG
TGCATGCCTGCGTGGATCCTGTTGTGGTAATTGCCACCAACGACGCCCTG
GGCATCGACCTGGCGGGGGAACACGATATCGAGGCGATGgtgcttgtgga
ccgaggggaCAGATTTTTCCAGACAAACAAATTCTATGCATTTGCCGCCC
CGGACGGCTCCGTGGTCATGCGTTGGTTCGAGCAGGTCCCGGCGGGCTGG
GTGCTGCTCGGAAGGGTCCATTACGTGACCTTGCCGTACACGGAGAAGAC
AGGAAGATTCAAAAGCGggtggatggaggtggatgaggatgattaa back to top
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