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Properties
| Property Name | Value |
|---|
| Product | nadh dehydrogenase subunit 11 |
| Orig transcript id | gnl|cribi|Naga_100210g4.8072.mrna |
| Orig protein id | gnl|cribi|Naga_100210g4.8072 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:622145..623929 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna244 ID=rna244|Name=rna244|organism=Nannochloropsis gaditana|type=mRNA|length=1887bp
TTCCACAGGGCGCCGGCTAAGTTGAATCGGCTTCAGCGATAGAACTAACC
CCAGGGCTTTCCGTTCCAGGAATCACGCCATGGTAGCGCCCTTCATTACC
CTTTCCGTCGGATTGGTCGTCGTGGCCATCGTCTATTATGGCCTTGTCCT
ACCTTTGTACCGCGGAATATCCCGTCGACGAATGGGGATTGCCAAGGGCG
CCATAACCGTAGCCTTCTTCCATCCGTATTGTAATGCGGGAGGCGGTGGC
GAGCGAGTACTCTGGATGGCAGTCAAGACGCTGGCTTTGCTCCATGCCAA
GTTGATCAAGTCTTCGCAGCGGCCGTTGCATGTCCTCATATATAGCGGTG
ACATCGGAGTCGACCCAAAGGAAATATTGCAGCGCGCAGAAGATCAATTC
GGTGTCCAACTACGAGACATATCCATGCCTGTTACATTTGTAGACGTTCG
GGGCCGTGAATGGCTGGAGGCAGCCCGCTACCCCATCTTAACGATGGTGG
GGCAGAGCCTCGGCTCCCTCCTCCTGGGCCTGGTCTGCTTATTCGCCTTC
CCACCGGACGTGTTCGTCGATACCACGGGCTGTGCATTTACTTACCCTCT
GACTGCCTTGCTTGGACGTTGCCGGATCGCCGCCTACGTCCACTATCCTA
CAATCAGCACGGACATGCTCAATCTGGTTCGAGAGCAGCGCCCCTCTTAC
AACAATGATCGGGCTGTGGCCGGAAGTGCGCTGAGGTCGCATGTAAAGTT
GATATATTACCGGATATTCGCCATGTTGTACGGGCTCTGCGGCTTCTTCG
TCTCTTTGGTTATGACCAACTCGTCTTGGACGCAGGCGCACATCCGATCG
CTCTGGCGGCTGGGTCGGCAGCGGATCTGGACAGTCTTCCCGCCCTGCGA
CACGTCGGCGCTGCAGGTAAGCCCTAGGGACTATAAGGGTGAATTGACGC
GGTCTCTATATGCGGTGAGACTGGCTATGGCTTCTGTTGCTGGGCGGCCC
AGGCCCTACGCCGTTGTCTCGGGGTCATCAAAGACGGGTCGTCTCACAAA
ACTCGCGCCTCGTTATGATATTGCCTTCCAGGACTTGCCCCTGCGCCCGC
GGGAGCCCATCATCCTCTCAGTGGGACAATTTAGGCCGGAAAAGGACCAC
CCTCTCCAAATTCGCGCCTTTGCCCGCTTCGTGAAACCCGCCGGCATTGA
CGGAGGCCGAGGGGAAAAGGGAAGGATCAAGGAGCGCGTTAAGCTTGTCC
TCTTGGGAAGTTGTCGGGGCTCGGAGGATGAAAGGCGGGTTCAGAGTTTG
CGGAGCCTAGCTGCAGATATGGGAGTAGGTGACAGAGTGCAGTTTGTGGT
GGGAGCACACTTTTCAGAGCTCAAGGAGTGGCTGGGTCGGGCGAGTGTTG
GGCTGCACACGATGTGGAACGAGCATTTCGGGATATGTGTGGTGGAATAT
ATGGCCGCAGGACTAATAGCTGTTGCACACAACAGCGGCGGCCCAAAAGC
TGACATCATTGTCCCATGGAAGGGAAGATCGACGGGCTTTCTGGCGGCCA
CGGAGGAGGAATACGCGCATGCTTTCGCCCGCATATTTGCAATGGATGAG
TTGAAGGAGCTCACTCCTATGCGAACGTCCGCGCGGGAATCCATTGAACG
TTTCTCAGATGAGATTTTCGTGAGAGAGTGGGGGAACCTGATGAGCCCTT
TTCTGGGCTTGCCTGTAGAATAGAATTTATTAGTTATAGCATAGTGTACA
AAAGATAGGGTACCGACAAAGTTAGAATAAAGTAAAGATAAACAAGGTAA
CAGACGGGTTCTGCTTGCATGTCGCTTGGGTTTGTCGCACATGAGGATAA
ATCCCGATAGAGACTTTCTATTACTTATTAGAACCCC back to topprotein sequence of rna244 >rna244-protein ID=rna244-protein|Name=rna244|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MSNLTRLFVNDIEVFVPPNTTVLEAAEKVGVQVPRFCYHPALSIAGNCRM
CLVEIERTPKPVASCAMPVMKDMKVFTNSPLVKKAREAVLEFLLLNHPLD
CPICDQGGECDLQDQTMLYASDRSRFYEFKRGVEDKNLGPFIKTIMTRCI
HCTRCVRFADEIAGVGDMGTTNRGRDTEIGTYIGKAFESEVSGNVIDLCP
VGALTGKTYSFPLSTSSAASTALAARATARPLSMPQRPALTPGLNTAPLK
PSYPPASQGAAMGVMSRRALSCSFTSVFHLQKAGMAPQDFQKVTSLFKRS
VILPMAALISGAAVASVGASV back to topmRNA from alignment at CM002455.1:622145..623929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna244 ID=rna244|Name=rna244|organism=Nannochloropsis gaditana|type=mRNA|length=1785bp|location=Sequence derived from alignment at CM002455.1:622145..623929+ (Nannochloropsis gaditana)
AAGTCTCTTCGCTCATCCTacgcctcgcctcccccgaccccccgctcccc
ttATGCCGCTGCCCCTCCGCTGCTCCATGCTCACATCCACGCGTATCAAT
ATCTTGTGGCTTTTTCCATTCCATATGTAGGCATCGGTCCGAGGACTTGG
AGTCTGTAATTTgcacaaggaagggaaaggctgGGAGTAACAACATTTGC
CCTCTCGCTCAACGTGCGACTCTGCCTTCGACTCAGACCTTCTAGTTAGG
CTCCCAATTTAAAGGCAGCAGCCTCTGTTGTACGACCACAAATATGAGCA
ACCTAACGCGGCTATTTGTCAATGATATAGAGGTATTTGTCCCTCCCAAT
ACTacggtgctggaggcggctGAGAAAGTAGGCGTGCAGGTACGTCATGT
CGGGGAGACGAGTCTGAGATTGCCCTAACATCCATGTTGTAAAATTGCGT
ATCCCTTGATGGTTTTCATGAGTGCTTACAACACTGTATAAATGTCCTTG
TATGGACGGGTATGCTGCGACGAACGTATTGTGCTTCCCAAGGTTGcgac
cttcctccacggacGGGAGCGAGAGCGTGAGGTGCCTGTCAGACACTCTC
GACAACTTCGACGATATATTGCGGACTACGGCTGCTTTCATGCTTCTTGT
TCGTTTCGCTTGCAATGCACACTTCGCCCACGCACTCTCAATGCCTCTCG
TTTTCGGCGCAGGTGCCTCGGTTCTGCTACCACCCGGCCCTCTCGATTGC
CGGCAACTGCCGCATGTGCCTGGTCGAGATCGAGCGCACGCCAAAGCCCG
TGGCTTCTTGCGCGATGCCCGTCATGAAGGACATGAAAGTCTTCACGAAC
AGCCCCCTTGTCAAgaaggcccgggaggccGTCCTCGAGTTCCTGCTCTT
GAACCACCCCCTGGACTGCCCCATTTGCGATCAGGGCGGGGAGTGCGACC
TCCAGGACCAGACGATGCTCTATGCCTCGGACCGCTCGCGCTTCTACGAG
TTTAAacggggcgtggaggacaagaatCTGGGTCCTTTCATCAAGACGAT
CATGACCCGCTGCATCCATTGCACCCGCTGCGTCCGATTCGCGGACGAGA
tcgcgggcgtgggggacaTGGGGACGACCAACCGCGGGCGTGACACGGAG
ATCGGCACCTACATCGGGAAGGCCTTTGAGTCGGAGGTGTCTGGAAATGT
GATTGATCTCTGCCCGGTGGGGGCTCTCACGGGCAAGACctactccttcc
ccctctccacctcctctgccgcctccaccgcgctggccgcccgcgccacc
gcCCGGCCCTTGTCCATGCCGCAACGCCCAGCTCTCACACCTGGACTAAA
CACTGCTCCTTTGAAGCCGTCCTaccccccggcctcgcaAGGCGCGGCGA
TGGGTGTCATGTCCCGTCGCGCGCTTTCCTGCTCTTTCACCTCTGTATTC
CATTTGCAGAAGGCTGGCATGGCGCCTCAGGATTTTCAGAAGGTGACAAG
CCTTTTCAAGCGGTCGGTCATACTTCCCATGGCTGCCTTGATTTCAGGTG
CTGCCGTGGCCTCCGTGGGTGCTAGTGTCTGAATAATAAATAGGAGGGCC
TGGGTGGAAGAGACCCATGCCTCTCTGTGTGAAGGCAgtggggaggtggt
gcggaggGCTGGGGAAGGCGCTGGAATGATAACGGACACCGCGGCCGTTT
CTTTTTAGGAACTGAGAATGCGTGAAATTAGAGACTTATGCCCGAAGAAG
GAAATATTAAGAATGATACACAACCGTAGGCGCGA back to topCoding sequence (CDS) from alignment at CM002455.1:622145..623929+ >rna244 ID=rna244|Name=rna244|organism=Nannochloropsis gaditana|type=CDS|length=1932bp|location=Sequence derived from alignment at CM002455.1:622145..623929+ (Nannochloropsis gaditana)
ATGAGCAACCTAACGCGGCTATTTGTCAATGATATAGAGGTATTTGTCCC
TCCCAATACTacggtgctggaggcggctGAGAAAGTAGGCGTGCAGGTGC
CTCGGTTCTGCTACCACCCGGCCCTCTCGATTGCCGGCAACTGCCGCATG
TGCCTGGTCGAGATCGAGCGCACGCCAAAGCCCGTGGCTTCTTGCGCGAT
GCCCGTCATGAAGGACATGAAAGTCTTCACGAACAGCCCCCTTGTCAAga
aggcccgggaggccGTCCTCGAGTTCCTGCTCTTGAACCACCCCCTGGAC
TGCCCCATTTGCGATCAGGGCGGGGAGTGCGACCTCCAGGACCAGACGAT
GCTCTATGCCTCGGACCGCTCGCGCTTCTACGAGTTTAAacggggcgtgg
aggacaagaatCTGGGTCCTTTCATCAAGACGATCATGACCCGCTGCATC
CATTGCACCCGCTGCGTCCGATTCGCGGACGAGAtcgcgggcgtggggga
caTGGGGACGACCAACCGCGGGCGTGACACGGAGATCGGCACCTACATCG
GGAAGGCCTTTGAGTCGGAGGTGTCTGGAAATGTGATTGATCTCTGCCCG
GTGGGGGCTCTCACGGGCAAGACctactccttccccctctccacctcctc
tgccgcctccaccgcgctggccgcccgcgccaccgcCCGGCCCTTGTCCA
TGCCGCAACGCCCAGCTCTCACACCTGGACTAAACACTGCTCCTTTGAAG
CCGTCCTaccccccggcctcgcaAGGCGCGGCGATGGGTGTCATGTCCCG
TCGCGCGCTTTCCTGCTCTTTCACCTCTGTATTCCATTTGCAGAAGGCTG
GCATGGCGCCTCAGGATTTTCAGAAGGTGACAAGCCTTTTCAAGCGGTCG
GTCATACTTCCCATGGCTGCCTTGATTTCAGGTGCTGCCGTGGCCTCCGT
GGGTGCTAGTGTCTGAATGAGCAACCTAACGCGGCTATTTGTCAATGATA
TAGAGGTATTTGTCCCTCCCAATACTacggtgctggaggcggctGAGAAA
GTAGGCGTGCAGGTGCCTCGGTTCTGCTACCACCCGGCCCTCTCGATTGC
CGGCAACTGCCGCATGTGCCTGGTCGAGATCGAGCGCACGCCAAAGCCCG
TGGCTTCTTGCGCGATGCCCGTCATGAAGGACATGAAAGTCTTCACGAAC
AGCCCCCTTGTCAAgaaggcccgggaggccGTCCTCGAGTTCCTGCTCTT
GAACCACCCCCTGGACTGCCCCATTTGCGATCAGGGCGGGGAGTGCGACC
TCCAGGACCAGACGATGCTCTATGCCTCGGACCGCTCGCGCTTCTACGAG
TTTAAacggggcgtggaggacaagaatCTGGGTCCTTTCATCAAGACGAT
CATGACCCGCTGCATCCATTGCACCCGCTGCGTCCGATTCGCGGACGAGA
tcgcgggcgtgggggacaTGGGGACGACCAACCGCGGGCGTGACACGGAG
ATCGGCACCTACATCGGGAAGGCCTTTGAGTCGGAGGTGTCTGGAAATGT
GATTGATCTCTGCCCGGTGGGGGCTCTCACGGGCAAGACctactccttcc
ccctctccacctcctctgccgcctccaccgcgctggccgcccgcgccacc
gcCCGGCCCTTGTCCATGCCGCAACGCCCAGCTCTCACACCTGGACTAAA
CACTGCTCCTTTGAAGCCGTCCTaccccccggcctcgcaAGGCGCGGCGA
TGGGTGTCATGTCCCGTCGCGCGCTTTCCTGCTCTTTCACCTCTGTATTC
CATTTGCAGAAGGCTGGCATGGCGCCTCAGGATTTTCAGAAGGTGACAAG
CCTTTTCAAGCGGTCGGTCATACTTCCCATGGCTGCCTTGATTTCAGGTG
CTGCCGTGGCCTCCGTGGGTGCTAGTGTCTGA back to top
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