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Properties
| Property Name | Value |
|---|
| Product | protein cbby |
| Orig transcript id | gnl|cribi|Naga_100321g6.7988.mrna |
| Orig protein id | gnl|cribi|Naga_100321g6.7988 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:610650..611803 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna242 ID=rna242|Name=rna242|organism=Nannochloropsis gaditana|type=mRNA|length=6801bp
TGGCCACTCCTACGCATCGTGCGAAAATGATGTTATGCTTTAAATTGGAT
TCCTGACATCAATCCGGCAAAGCGCCAGCGCGCAGGCCCTCGCTTGAGGA
CTCGAGGTCCTTTTCAGCGATGTGGGTGACTGAGACATCGACAGCTTTCT
TGGGCTTTGACTCATGTTGTGGAAAGGCGCGAGCTAACACACCGACGAGG
ATTGAGCAAAATTTGTTTTTCAACACACAGGTCAACGCTATGCCCGCTTT
AGATCAAAATTGCGTCCACTTTTCCGGGCTTTGGATCAGCATGAAGCCAG
GAGAAGCAGCGGAAACAGTTTGCCAATAAAATTACATACGGGCAGATTGG
TGCAGTCCTACCCACGATTCTATAAATTGTCGTTTGTGCTGGATCCTGAC
GACAGTGTCACGTAGCATTTGATATCTTCAGGCCCGCAAAAGAAGCCGGG
GAGGATGGAGGGGATCCGGCAGGTGCTGTTTGATCAGTTGGGGTTACGCT
ATACCTTCCCATCGAGTGAGTCACTGGCACATTCTACTCGCTGCTTACTC
TACGAGGATGAAGGCGGGATCAGCGAGGGCGACAGTGGCTGGGAGGACGG
TCCCTCCATTCCCCAGAGGCATCCGCGGGAGGTGGTGGTGAAGGCCTGCT
CCCGCGGCGCCGAGGACGCCCTGCTTGCGATACTCAGCGGTCTCTACGAC
TCGTGCCGTGTGGTGGAGGCCGCGTCAGCCAGTGCACCTTTGTGGCACCG
CCTGCCGCCTTCGCCCATGTATCCAAAGCATCCAGGCTTGCTGCCCCTTT
TAGCCCTCTGCCGCGGCCGTGACGGAGGCCTGTTCTTTATATCCGAGTAC
TACCCGCAAAACCTGCTGACTTTGCTTCATTTCAGCAGCCAGTCACTATT
GGAGTCGAGTTTACTTGGCCGCAACTCACGGGAAAGTGTGATGGACCTTC
GCTTATTTTTCCTCTTCTATCAATTGATACGCATCTTGGCCTTCTATCAC
AAGCATCCGGGCCGGTCCCTGGGCAACCTGGCGGTCACATCCGTCTACGT
CTCCGACATGATCTGGCTCCGAGTGCTGCCCCCCCCCGCCAACCCCCCCC
CTCGCGCCCTCCCCAGCCCCTCCCTCTGCGCCTCCGCCATCTTCAAACTG
CTCCATACCTCGTCCTCCCGGCCACGACGTGCCCCTGACCCTGCGCTGGA
TGGAGGGGCGGGTGGGGAACCTGGAGTACCTCATGGCCATTAATGCCGCG
GCGGGGCGTTCAATGATTGACGCCATATTCCACCCGGTCTTGCCCTGGGT
GAGTGACCTCAAGGTTCAAAATGGCGGCTGGCGCGACTTGAGTAAAAGCA
AATTTCGACTGAATAAGGGGGATGCCCAGCTGGACTCGGCGTACAGGCAT
TCCACCCCTCCCCACCATATCACTGAGTCCTTGAGCGAGATCACCTACTA
CATCTACATGGCACGACGCACGCCATTGGCGGTGCTCCGTCGTGTCGTTC
GCGCCGACTTTGTGCCACAACACTACCCCTCGAACATAGCGCGCATGTTC
GACTGGACACCGGACGAGTGCATCCCCGAGTTTTTCGTGGACGCCAGCGT
CTTCGCCTCCCTGCATCGCGCCATAGGCATGGCCGACGTGTCGTTTCCGC
CCTGGTGCCCCGACGCCTCGGCTTTCATCGCCTACCACCGGGCCTTGCTC
GAGAGCGAGGAGGTCTCCGCCCGCATGCATCTGTGGATCGATCTGACCTT
CGGCCACTGCCTAGAAGGCGCAGCCGCGGTCCACAACAAGAACGTGCCGT
TGCGGTCGGGGGAGGCCGGGACCGGCCAGCGGGTCCTTGGCCACGACTAC
AAAAATCCTGGATTCGTTCAGATCTTTCGCGAGCCCCATCCTCAGCGGCG
TAGTCTCCGACGCGGCCTGAACGTCCTCCAGGCAGCGGTTTTGCAGGCAG
CCGCATGTAGGGGGCGGGAGTCCGAGGAAAGGGGGGGGCATGCGTCCTAT
GTGATGGCGGTCCAGGGCGTGGAGGTCACAGGGGACGAGACAGACATGCT
TCGGAGGGCGCCGACCGTCCCCGTCGAGGACAGGAACTTGCAGCAAATCC
GGGATTGCGTGGCGTCGCCGGACGTGGTCCAGGCTGTAGGTAGTTTTGCG
CAGAAAGCCAAGGCGCGGTTGGAGCCCGCATACTCACTGACCGGACCCCC
GCCTCTCCCGTTCTCGTCTTTCTCCCACTCGACGCCTGTCTCATGCTCGC
CCCTCCAACCTCGATCGCCGACAGCCCCTTCTCAAGCTCCCACACAGCTC
GAGCAGCAACGCGACGATATGTTCGCAGCAGGTTGCATTTTAGCGGAGCT
GTGCCTGGGCAAGCCCGTCATGTCGATTCAAGATGTGGCCAGTCTCCGAC
AAAACTCGCTGTCGGAGGGGGCCATGGGGGGCGGGGACGCTGCGGCGGGG
GGAGAGGGGCGGGAAAGGGACGACGCACGGGGGGGCGGCTGGGCTGGGCT
CCAAGGCGAAACCTACCATCTTCCTTATCACGTGCGGGCGCTGCTCCACT
CCCTCCTCCAGCGCGACCCGACGCGGCGACCGCGGGCCGTCGATTTGCTG
CGCACGGAAGAAGGGGTGGACAGCGACGAGGAGGAGGAGGATGGCCAGCC
CGCAACCAGAGAGGTTGGCGTGGGGGTTCCCGGTGCCAGACTGCTTGATG
GCCCTTTCCCCCCCTACTTCCAAGACATGTACCGGTATTTGTCGACAGTC
TACCTCCATCAAAGCGACGGGGACTTCGAGTCGATCTCGGTAACGCTTTC
GCTCGCGCAGCAGCTGACGGAGCTGCCCCTCCCTGCCTTCGCCTTGATCC
TGCCCTACATGCTGAGAGTGCTGGATGACCCGGCCCCCTTCGAGGCGTAC
GAAGACCGTTCCCAGCATTTTCCTGCCAATGGCCATGCTTCTGCGAGCAC
AGACGAGAGGGGCACGGGAAACGCGCCCGAGGAGGGAGATGGGGGGGAGT
GGCCGAGCGGCCAGCAGCCTGTGATCCCGCACGAGCACGTGGAGGTGCCT
GTGATCCTGCGCCTCAACCCTTTCTTGGAACTGCTCGGCCAGAAACTGGG
CATCCGTCACACACAGCGACTCCTCCTCCCTCGCGTGGCCTCCTTCATGG
GCCGGCTTAGGAACCACCGGCTCCTGCGCGCGCTCTTCGTCTCCCCGGTC
TGGTCCCTCCTCATCCGCTTGGGAGGCACTGGGGGCTTCCTAACGCACTG
CCTGCCTTTCATGCTCAAGAGCCTGGGGCCGGAAACGCCCCTAGAGGTGC
AGCAAGCGGCGTACGTGGCCGTCTTCAATTTGGGCGCCCCCGACATGCTA
GGCCCTGGTCTGATGGCGCGCTACGTCATCCCCACGCTGCTCTCCGGCGT
GGGGGCGATCAGGCAAGGGGAGGGCGCAGGCGTTGAAGGGGCAGAAAGCG
GGACGGAGGCCGCGAGCCGGGCAGCATCCGCGTGGGACGAGGACCTGTAC
CAAGCGAGGGCCTTGGTGAACATCTGCAGGGAGATCGACGACGATGTGCT
CGTCTCCATGGTCGCGGAGCGGCTCCTGATGGAAATCATCCCCACCTTAG
CCCAGGAGCTCGTGCCGCAGCCCTCCCAGGCCGCTTCACTGGCCCTTTTG
GAGACCGTCTCCGTGCTGACAGGCCTCCTCCCGAGCCTCCAGCCCAGCAG
CGCTATTTTCCACTACTGTCAGCAGCCCTCCGTGCCCGTGCAGCAGCTTC
TCCTCGCCATCCCCCTTCCTCCTCCCCCGGCGTTCCCCACCCCTTCCCCA
GCATCCAGCCTCCCGGGACCCTCCTTCCCCTCGACCTCCCCCCGCGTGGC
ACCAGCCCTGGCCCCGCACAGCCCACGGCACCATTTGCACGTGCAGCTCG
GACGCTTAGTGGTGGCACTGTCGACCTGCGTGGGCGCTGTCGCTACGCAG
GACTACCTCCTCCCAGCCATCAACACCTTTCTGGGAGGATTCTCCGACAT
GTACGACCAGGCACTCTTCTTCATCGAGGAAGCCGGCGGGGAGCTGCAGG
AGGGAGGCACTGTTAGCGCCGAGGGAGCGGTGTGCGCGATAGAGGAGACG
CGAATGGCCGCCTTCGACGTGGTGGAGGATCTCTGGCGCCACCTGGAGGC
GATGTACGATGAGAAGGTGCTCCGCCAACTCGTCCCGAACGGCTACAAGC
TCGTGGCTGTATGGTTCCACCGGCTGAATGGGCCTGCACGGGCGGACAGG
GAGGCGGCAGGAGGGTCGAGGGTCACGGTGTTGCGGAATGAGGGGGCGAG
ACGAGGCAGGGGCGGAGGAGGGAGGGCGTGGAGGCGCGAGGGGGGAGACG
TAGGCGAGCGCTTCGCAGATATGGTCATTGAAAAGGGGCTGTCTGGTCTG
CTCTGGATAGCAAACAAGAGTCGGAAAGGCTTTCAGCGAGCGGGAGGGGA
GGGCCATCGGCAGGCAGCTTCCGGGATGGAGGTTCCAGGGGAGGCGGGGC
CCGAAATGCTCAAAGACAGGATCCCCACGGCGGTGTCGAAGGTCTTGCGG
GAGGAAAGCGAGGAGGACCCGCGTGGGAGTCCGGTCAGGAGGGAGCTGGA
GGAGGGGGAGGAGGGGGAGGAGGGGGAGGAGGGGGAGTGCCTGCAGATGC
GGCGAGTCTCGACCGCGGGGAAGGACGTCCTCCTCCCCATCTCCCCAGGC
TCCGCGTTGTCCTCGACGGCCAGCCCCCTGTCGCTCTCTCCGGTTCGGGG
GCAGGGCCGGGCCTCGCACAAGCTGGCGTCGTCTGACGAGGAGGAGGAGG
AAGAGGGGGAGGAGGAAGAGGGGGAGGGTCACGAGGATGACGCGGAGCTT
GGCCTCTGGGGCGCGGCCTCCTCGCCCTCACGCTCCTTCCACGTGGACGG
GTCCATCCCTCACGGCTTTCCTCTCGTCGCGAACGGGAACCGGGGAGCAG
ATGCGCGGTCCGGTCGCCGAGAGCGTTCGGGCAGTGTGACCAGGAGCAGC
GTCGGTCCCTCCCTTGTCTCCGGCATCCCTTTTTTGAAGAAAAAAAAGGA
CGCGTCTGCCTCGCTCGTCTCCACGTCCGGCTCTCCCTCCCGATTGACCG
GGGGTAGGAGCGCCAAGCGCGAGGCCTGGTCGTCGAGCGTGAGCAAGGAC
CATGTATGGCTCCTGGGCCCCTTGATAGACCCTCCCAGACTGGAGGCTCC
CGAGGCTGTGGCCGACGCCGGGAGTTCCTGGCCCATCCATCTGTGCGTGC
AGACGACTTTACAGGCCTACAAGAGCGGCAGTAGTGTCCGGTCGCTGGCT
GTGGACCCGGGCGAGACGCTTCTTCTCTCAGGATCCCGCCGCGGTGTCGT
CAAGGTATTCTCATTACGGGAGCACCCTGTGGCGCTTTCCCAGATGGGGG
GGGGGGGGGCTGAAAGCCATTCCGAGAGCATTTTTTCTCTGGCTTTCATG
AACGGATCGGATCAGGCAGTCTCCTTGGACGGTTCGCTGTTGATATGGGA
CGTGAACACGGGAGCGGTTCTGGCACGCAAGGAGAAGTACGCCCCGGAGA
TCGGTGGTATGCCCCTGTCCTACATGGCGGTGGACGTGCTGCCTGCGGGA
GGGGGTGTGGGTGTGGGCGACAGCCGGAGCACGGGGACCCAGCAGCAGCA
CCAGCTCTTGGCCGCCACTCAGACGACGCTCTACCATTTGGATCTCCGGG
ATCGGGCATCGGCCTCCTCCGCCTCCATGGTGCTTACACAAGCGAGCGAG
TGGGGCGTCAGCTCGTCCTGTTTTCAAGACCGCGGGATTGGCGCCGCCCT
CCAATGCGTGTGCGCGCACGACGATGCCCACTGGATCTGCGCGGGCTCGA
GCAACGGTCAGCTCTGTGTGCTCGACCGGCGGACGGGGGAAATTGCACAA
GCCTGGCAAGCCCACGAGGGCCCTATCCTCCGCGTCTTCCCCTGGGGCCG
CGACAAGGTCTTGAGTGTCTCCTTGGACCAGACGGCGGTGCTGTGGGACA
TCCGCCACACCATTCCCCGCGACATCTGTTGCCTCAGGGGCCTTCCAGAC
TCCCAGTCCGGCATGACCCTGCTTGTCCACGAGTTCCGGCGCTCTTCCGC
GTCCGCCACGGCCCCGCTAATCTCTGGCTTGGGGGTCACGGGAACCAAGC
GCCCGCACGTGCTCATGTCTTTCGGTGGCCACAAGGGCGTGGTTGCGCGA
ATGCCCCGGCCAGGCATGGATGTGGCGGCCAAAGCCCGTTATTTCCTCTC
GCCCAACGGCCTTAAACTTCGAGCGAAGATAAATGTTCAGTCTGCAGCGA
TGCTTCCTCTTCGGAAACTCCTGTTGGTTGGGTGCGACGACGGCAATATA
AGGGTCTGTACATAGGGCATACAGGTTGATGTGGCGTAAGCACAGAATAT
GGCTTTGTACAGTGAAACAATGTATATTTTCGAAAGTCGAAAAAGAAATT
GCTAAGTGTTGAGTGATCCGAATTTTTGCATTTCTTGTCAGACGGGCTCG
CAACTGTCACGAGAGCCCTAGGGCCTCCAGATCCTTAAACGAGACACCGC
CGCCGGCCTCATCCTTCCCAAGCTCCTCCACTACTCGATCAGCTGCCCTA
AAGTCCTCGTTGGCAGTGTAGGAGCTCTTCGTGACCAGGCACTTCATTCC
CGCGGCCTTGGCTGCCGTCAGACCAATGTGAGAGTCCTCGATCACTACGG
TGCGACGGGCGTCGAGGCCCATTTGTTCCTTCGCAAGGAGGTAAATGTCA
GGCCAGGGCTTTTTTTTCGGTACAACATCACCGGCAAAGATTTGAAAGTG
A back to topprotein sequence of rna242 >rna242-protein ID=rna242-protein|Name=rna242|organism=Nannochloropsis gaditana|type=polypeptide|length=290bp
MAFSFRCLLLHKLVFILLLSTARAFMRSPVLGSRTPRRGNVRMMAGDSNA
NWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGG
GKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPL
RPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAG
DVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVT
KSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEALGLS back to topmRNA from alignment at CM002455.1:610650..611803- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna242 ID=rna242|Name=rna242|organism=Nannochloropsis gaditana|type=mRNA|length=1154bp|location=Sequence derived from alignment at CM002455.1:610650..611803- (Nannochloropsis gaditana)
TTCTAACACCAAGTGTACAGGAATATCCACCATGGCGTTCTCCTTCCGCT
GCCTTCTGCTCCACAAATTGGTCTTCATCCTTCTGTTGTCTACTGCAAGG
GCGTTCATGCGATCCCCTGTGCTAGGCTCGAGAACTCCACGTCGTGGAAA
TGTGCGGATGATGGCAGGCGACTCCAACGCCAACTGGGCGCTTCTTTTTG
ATTGCGATGGTGTCCTGGCTGACACTGAGCGTGACGGCCATCGTCCATGT
TTCAACCTTGCGTTTAAAGAAAAGGGAATTGACTGTACGTGGGACGTTGT
TTTGTATGGGAATTTGTTGGAGGTAAGTTCATGTGCGCTATATGTCGTCT
TCTCAAAGAATATTGAAAAACAATGCTGATTTAGTGGGTAGGACGCCGAG
CTAAGTCTCTTTTTTGTTTATTATTGCCAGGTCGGTGGTGGGAAGGAACG
CATGACTGCGCATTGGAACAAAGTTGGATGGCCGTCGGGATATGACAGTG
ATGCCAAGCGCCAGGATTTAGTGCGAGAGCTGCACATGTTGAAGACAAAT
CTCTTCATGAATTACATTGAGGAAGGAAAATTACCACTGCGCCCGGGAGT
GCTGCGCGTTGTGGACGCTGCCATCGCCGCCGGCGTGCCCCTCGGTGTAT
GTTCGACTTCCAACGACAAGGCAGTCCGCACCTTGATTCGAGTCTTGATG
GGCGAAGAGCGAATGTCTCACTTTCAAATCTTTGCCGGTGATGTTGTACC
GAAAAAAAAGCCCTGGCCTGACATTTACCTCCTTGCGAAGGAACAAATGG
GCCTCGACGCCCGTCGCACCGTAGTGATCGAGGACTCTCACATTGGTCTG
ACGGCAGCCAAGGCCGCGGGAATGAAGTGCCTGGTCACGAAGAGCTCCTA
CACTGCCAACGAGGACTTTAGGGCAGCTGATCGAGTAGTGGAGGAGCTTG
GGAAGGATGAGGCCGGCGGCGGTGTCTCGTTTAAGGATCTGGAGGCCCTA
GGGCTCTCGTGACAGTTGCGAGCCCGTCTGACAAGAAATGCAAAAATTCG
GATCACTCAACACTTAGCAATTTCTTTTTCGACTTTCGAAAATATACATT
GTTTCACTGTACAAAGCCATATTCTGTGCTTACGCCACATCAACCTGTAT
GCCC back to topCoding sequence (CDS) from alignment at CM002455.1:610650..611803- >rna242 ID=rna242|Name=rna242|organism=Nannochloropsis gaditana|type=CDS|length=1746bp|location=Sequence derived from alignment at CM002455.1:610650..611803- (Nannochloropsis gaditana)
GTCGGTGGTGGGAAGGAACGCATGACTGCGCATTGGAACAAAGTTGGATG
GCCGTCGGGATATGACAGTGATGCCAAGCGCCAGGATTTAGTGCGAGAGC
TGCACATGTTGAAGACAAATCTCTTCATGAATTACATTGAGGAAGGAAAA
TTACCACTGCGCCCGGGAGTGCTGCGCGTTGTGGACGCTGCCATCGCCGC
CGGCGTGCCCCTCGGTGTATGTTCGACTTCCAACGACAAGGCAGTCCGCA
CCTTGATTCGAGTCTTGATGGGCGAAGAGCGAATGTCTCACTTTCAAATC
TTTGCCGGTGATGTTGTACCGAAAAAAAAGCCCTGGCCTGACATTTACCT
CCTTGCGAAGGAACAAATGGGCCTCGACGCCCGTCGCACCGTAGTGATCG
AGGACTCTCACATTGGTCTGACGGCAGCCAAGGCCGCGGGAATGAAGTGC
CTGGTCACGAAGAGCTCCTACACTGCCAACGAGGACTTTAGGGCAGCTGA
TCGAGTAGTGGAGGAGCTTGGGAAGGATGAGGCCGGCGGCGGTGTCTCGT
TTAAGGATCTGGAGGCCCTAGGGCTCTCGTGAATGGCGTTCTCCTTCCGC
TGCCTTCTGCTCCACAAATTGGTCTTCATCCTTCTGTTGTCTACTGCAAG
GGCGTTCATGCGATCCCCTGTGCTAGGCTCGAGAACTCCACGTCGTGGAA
ATGTGCGGATGATGGCAGGCGACTCCAACGCCAACTGGGCGCTTCTTTTT
GATTGCGATGGTGTCCTGGCTGACACTGAGCGTGACGGCCATCGTCCATG
TTTCAACCTTGCGTTTAAAGAAAAGGGAATTGACTGTACGTGGGACGTTG
TTTTGTATGGGAATTTGTTGGAGGTCGGTGGTGGGAAGGAACGCATGACT
GCGCATTGGAACAAAGTTGGATGGCCGTCGGGATATGACAGTGATGCCAA
GCGCCAGGATTTAGTGCGAGAGCTGCACATGTTGAAGACAAATCTCTTCA
TGAATTACATTGAGGAAGGAAAATTACCACTGCGCCCGGGAGTGCTGCGC
GTTGTGGACGCTGCCATCGCCGCCGGCGTGCCCCTCGGTGTATGTTCGAC
TTCCAACGACAAGGCAGTCCGCACCTTGATTCGAGTCTTGATGGGCGAAG
AGCGAATGTCTCACTTTCAAATCTTTGCCGGTGATGTTGTACCGAAAAAA
AAGCCCTGGCCTGACATTTACCTCCTTGCGAAGGAACAAATGGGCCTCGA
CGCCCGTCGCACCGTAGTGATCGAGGACTCTCACATTGGTCTGACGGCAG
CCAAGGCCGCGGGAATGAAGTGCCTGGTCACGAAGAGCTCCTACACTGCC
AACGAGGACTTTAGGGCAGCTGATCGAGTAGTGGAGGAGCTTGGGAAGGA
TGAGGCCGGCGGCGGTGTCTCGTTTAAGGATCTGGAGGCCCTAGGGCTCT
CGTGAATGGCGTTCTCCTTCCGCTGCCTTCTGCTCCACAAATTGGTCTTC
ATCCTTCTGTTGTCTACTGCAAGGGCGTTCATGCGATCCCCTGTGCTAGG
CTCGAGAACTCCACGTCGTGGAAATGTGCGGATGATGGCAGGCGACTCCA
ACGCCAACTGGGCGCTTCTTTTTGATTGCGATGGTGTCCTGGCTGACACT
GAGCGTGACGGCCATCGTCCATGTTTCAACCTTGCGTTTAAAGAAAAGGG
AATTGACTGTACGTGGGACGTTGTTTTGTATGGGAATTTGTTGGAG back to top
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