EWM30434.1, cds242 (CDS) Nannochloropsis gaditana

Overview
NameEWM30434.1
Unique Namecds242
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:611482..611772 -
Alignment locationCM002455.1:610792..611373 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30434.1
Productprotein cbby
Orig transcript idgnl|cribi|Naga_100321g6.7988.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:611482..611772 -
CM002455.1supercontigCM002455.1:610792..611373 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR023214HAD-like_dom
Homology
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|585113096|gb|EWM30434.1| (protein cbby [Nannochloropsis gaditana])

HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query:    1 MAFSFRCLLLHKLVFILLLSTARAFMRSPVLGSRTPRRGNVRMMAGDSNANWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEALGLS 290
            MAFSFRCLLLHKLVFILLLSTARAFMRSPVLGSRTPRRGNVRMMAGDSNANWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEALGLS
Sbjct:    1 MAFSFRCLLLHKLVFILLLSTARAFMRSPVLGSRTPRRGNVRMMAGDSNANWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEALGLS 290          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|298710702|emb|CBJ32126.1| (haloacid dehalogenase-like hydrolase family protein [Ectocarpus siliculosus])

HSP 1 Score: 322.013 bits (824), Expect = 4.232e-107
Identity = 158/236 (66.95%), Postives = 183/236 (77.54%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD-EAGGGVSFKDLEAL 287
            AL+FDCDGVLADTERDGHRP FN AFK K +DC W V LYG LL VGGGKERMTAHW++VGWP    +  +R  LV+ELH+LKT LF   + +G++PLR GV+R+VD AI   VPL VCSTSNDKAV  L++ LMG+ER+   QIFAGD+V KKKP PDIY LAK+ MGLD  R VVIEDSHIGLTAAKAAGM CLVTKSSYT +EDF AAD+V EELG+D EA   V+   L A+
Sbjct:   56 ALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAI 291          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|224004798|ref|XP_002296050.1| (possibly a phosphatase from the CbbY protein family [Thalassiosira pseudonana CCMP1335] >gi|209586082|gb|ACI64767.1| possibly a phosphatase from the CbbY protein family [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 300.827 bits (769), Expect = 4.845e-99
Identity = 157/272 (57.72%), Postives = 190/272 (69.85%), Query Frame = 0
Query:   16 ILLLSTARAFMRSPVLGSRTPRRGNVRMMAGDSNANWALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            ++LLS  +A   +P      P   ++R     SN   A+LFDCDGVLADTERDGHR  FN AF+   ID +W    YG LLEVGGGKERMTAHWN+VGWP     D  R + V  LH+ KT++FM+ I+EG +PLRPGVLR+VD AI  GV L VCSTSN+KAV  L+  LMG ER S FQIFAGD+V KKKP PD+YL+A + MGLD    V+IEDSHIG+ AA A+G+ CLVTKSSYTA EDF  A ++VEELG D+A  GV+   L +L
Sbjct:    7 LVLLSATQAASFAPTHSRVQPVSTSLR---ATSNLE-AILFDCDGVLADTERDGHRLAFNRAFQLNSIDESWSEQRYGKLLEVGGGKERMTAHWNEVGWPDAIPEDG-RAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELG-DDAATGVTLDTLASL 272          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|873238701|emb|CEL95598.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 300.827 bits (769), Expect = 1.250e-98
Identity = 149/235 (63.40%), Postives = 179/235 (76.17%), Query Frame = 0
Query:   52 WALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKV--GWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDL 284
            + +LFDCDGVLADTERD HRP FN AF+EKG D  W V LYG+LLEVGGGKERMTA+WN+   GWP GY +  ++  LV+ELH+ KT +F + I +G++PLRPGV R+VD AIAAG PL VCSTS+DKAV  L+ VL+G +R   F+IFAGD+V KKKP PDIYLLA +QM LD  + +VIEDS IGL AAKAAGM+C+VTKSSYT NEDF  AD V+ ELG D     VS  +L
Sbjct:   69 FPILFDCDGVLADTERDAHRPAFNQAFREKGFDDVWGVDLYGHLLEVGGGKERMTAYWNEKEGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYTQNEDFSGADMVIAELG-DPPHQCVSLDEL 302          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|676378451|ref|XP_009032504.1| (hypothetical protein AURANDRAFT_52151 [Aureococcus anophagefferens] >gi|323457009|gb|EGB12875.1| hypothetical protein AURANDRAFT_52151 [Aureococcus anophagefferens])

HSP 1 Score: 296.204 bits (757), Expect = 3.308e-97
Identity = 148/235 (62.98%), Postives = 170/235 (72.34%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            ALLFDCDGVLADTE DGHR  FN AFKEKG    W V  YG LLE GGGKERMTAHW+  GWP+GY     R+ LV+ELH+ KT +F   IE G +PLR GVLR++D A+A GVP+GVCSTS+++AVR L+RVLMG ER    QIFAGDVV  KKP PD+YLLA   MGL+  R VVIEDS IGL AAKAAGMKC++TKSSY   EDF  AD VV++L      GGV     +AL
Sbjct:   42 ALLFDCDGVLADTEPDGHRVAFNAAFKEKGFADDWSVDKYGQLLETGGGKERMTAHWDAAGWPAGYAGGDDRRALVKELHLRKTAIFNELIEAGSIPLRAGVLRLIDEALADGVPVGVCSTSSEQAVRNLVRVLMGRERYDALQIFAGDVVANKKPAPDVYLLAATTMGLEPARCVVIEDSSIGLAAAKAAGMKCIITKSSYADREDFTIADEVVDDLD----AGGVDLGKAKAL 272          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|1210518848|dbj|GAX22287.1| (hypothetical protein FisN_22Hh077 [Fistulifera solaris])

HSP 1 Score: 296.204 bits (757), Expect = 4.281e-97
Identity = 145/235 (61.70%), Postives = 180/235 (76.60%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            A+L+D DGVLADTERDGHR  FN AF+E  +   WDV  YG LLEVGGGKERMTAHWN+VGWP+   S+  RQ+ V+ELH+ KT++FM+ I EG++PLRPGVLRV+DAAIA  + L VCSTSN+KAV  L++ LMG ER + F+IFAGD+V +KKP PD+Y +A EQMGLD  R V++EDS IGL AA AAG+ C+VTKSSYTA EDF  A  +V+ELG D+   GV+ + L  L
Sbjct:   44 AILWDMDGVLADTERDGHRLAFNQAFQENNLQTEWDVERYGVLLEVGGGKERMTAHWNEVGWPANL-SEESRQEKVKELHLRKTDIFMDMINEGRIPLRPGVLRVIDAAIAENIRLAVCSTSNEKAVTNLVQTLMGPERAAQFRIFAGDMVQRKKPAPDVYNMAVEQMGLDKSRCVIVEDSGIGLKAALAAGIPCIVTKSSYTAGEDFTGAAMIVDELG-DDPRTGVTLETLAGL 276          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|971509972|dbj|GAQ88252.1| (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Klebsormidium nitens])

HSP 1 Score: 288.5 bits (737), Expect = 1.014e-94
Identity = 143/236 (60.59%), Postives = 170/236 (72.03%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAK-RQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            ALLFDCDGVL DTERDGHR  FN  FKEKG+   WDV  YG LLE+GGGKERMT H+N+VGWPS   SD + R+D V   H  KT +FM  +E G +PLRPGV R+VD A AAGVP+ VCSTSN+KAV  ++RV++GEER +  +IFAGDVVPKKKP P IY LA +++ +D  R VV+EDS IGL+AAKAAGM C+VTKS YT  EDF  AD V E +G D        +DL  L
Sbjct:    4 ALLFDCDGVLVDTERDGHRIAFNETFKEKGLQEDWDVQTYGKLLEIGGGKERMTHHFNEVGWPSQIPSDEQGRKDFVAGTHKRKTEIFMKMVESGAMPLRPGVARLVDEAFAAGVPVAVCSTSNEKAVSAIVRVMLGEERAAKIRIFAGDVVPKKKPNPAIYNLAAKELNVDPTRCVVVEDSFIGLSAAKAAGMTCVVTKSVYTQAEDFTKADAVYESIG-DTPSENFGLQDLAKL 238          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|219120567|ref|XP_002181019.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407735|gb|EEC47671.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 288.115 bits (736), Expect = 1.552e-94
Identity = 139/235 (59.15%), Postives = 171/235 (72.77%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            A+L+D DGVLADTERDGHRP FN AF E  +D  WDV LYG LLE GGGKERMTAHWN VGWP     +  R + V+ELHM KT++FM+ I    +PLRPGVLR++D AIA  + L VCSTSN+KAVR L+  LMG +R   F+IFAGD+V  KKP PD+Y +A ++MGLD  R V++EDS IG  AAKAAG+ C+VTKSSYTA EDF  A+ +++ELG D    GV+ +  E L
Sbjct:   10 AILWDMDGVLADTERDGHRPAFNQAFAENKLDTVWDVDLYGKLLETGGGKERMTAHWNNVGWPESIPENV-RSEKVKELHMRKTDIFMDMINAKSIPLRPGVLRIIDEAIAGDIQLAVCSTSNEKAVRNLVHTLMGADRAKRFRIFAGDMVENKKPAPDVYNMAVDEMGLDKSRCVIVEDSGIGWGAAKAAGIACIVTKSSYTAQEDFTGANLILQELG-DNPATGVTLETFEGL 242          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|1210529871|dbj|GAX11404.1| (hypothetical protein FisN_22Lh077 [Fistulifera solaris])

HSP 1 Score: 288.886 bits (738), Expect = 2.611e-94
Identity = 143/235 (60.85%), Postives = 177/235 (75.32%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKDEAGGGVSFKDLEAL 287
            A+L+D DGVLADTERDGHR  FN AF E  +   WDV  YG LLEVGGGKERMTAHWN+VGWP+    +  RQ+ V+ELH+ KT++FM+ I EG++PLRPGVLRV+D AIA  + L VCSTSN+KAV  L++ LMG ER +HF+IFAGD+V +KKP PD+Y +A EQM LD  R V++EDS IGL AA AAG+ C+VTKSSYTA EDF  A  +V+ELG D+   GV+ + L  L
Sbjct:   44 AILWDMDGVLADTERDGHRLAFNQAFAENNLKTEWDVERYGVLLEVGGGKERMTAHWNEVGWPA--IPEKSRQEKVKELHLRKTDIFMDMINEGRIPLRPGVLRVIDEAIANNIRLAVCSTSNEKAVTNLVQTLMGPERAAHFRIFAGDMVQRKKPAPDVYNMAVEQMDLDKSRCVIVEDSGIGLKAALAAGIPCIVTKSSYTAGEDFTGAAMIVDELG-DDPRTGVTLETLAGL 275          
BLAST of EWM30434.1 vs. NCBI_GenBank
Match: gi|168052741|ref|XP_001778798.1| (predicted protein [Physcomitrella patens] >gi|162669804|gb|EDQ56384.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 276.559 bits (706), Expect = 6.955e-90
Identity = 131/219 (59.82%), Postives = 166/219 (75.80%), Query Frame = 0
Query:   53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELG 271
            ALLFDCDGVL DTERDGHR  FN AF+EKG+   WDV LYG LLE+GGGKERMT ++N VGWP+  + +A+R+D V  LH  KT+LFM+ +E G+LPLRPGV  ++D A+  GV + VCSTSN++AV  ++RV++G++R +  +IFAGDVVPKKKP P IY LA   + +   + VVIEDSHIG+T+AKAAGM C+VTKS YT NEDF  AD V   +G
Sbjct:   10 ALLFDCDGVLVDTERDGHRISFNKAFEEKGLQVAWDVALYGKLLEIGGGKERMTHYFNGVGWPASVE-EAQRKDFVAGLHKRKTDLFMDLVETGQLPLRPGVASLIDQALDKGVQVAVCSTSNERAVSAIVRVMLGDKRAAAMKIFAGDVVPKKKPDPAIYQLAATTLNVQPEKCVVIEDSHIGVTSAKAAGMVCIVTKSGYTENEDFSEADAVFPCIG 227          
The following BLAST results are available for this feature:
BLAST of EWM30434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113096|gb|EWM30434.1|0.000e+0100.00protein cbby [Nannochloropsis gaditana][more]
gi|298710702|emb|CBJ32126.1|4.232e-10766.95haloacid dehalogenase-like hydrolase family protei... [more]
gi|224004798|ref|XP_002296050.1|4.845e-9957.72possibly a phosphatase from the CbbY protein famil... [more]
gi|873238701|emb|CEL95598.1|1.250e-9863.40unnamed protein product [Vitrella brassicaformis C... [more]
gi|676378451|ref|XP_009032504.1|3.308e-9762.98hypothetical protein AURANDRAFT_52151 [Aureococcus... [more]
gi|1210518848|dbj|GAX22287.1|4.281e-9761.70hypothetical protein FisN_22Hh077 [Fistulifera sol... [more]
gi|971509972|dbj|GAQ88252.1|1.014e-9460.59Haloacid dehalogenase-like hydrolase (HAD) superfa... [more]
gi|219120567|ref|XP_002181019.1|1.552e-9459.15predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1210529871|dbj|GAX11404.1|2.611e-9460.85hypothetical protein FisN_22Lh077 [Fistulifera sol... [more]
gi|168052741|ref|XP_001778798.1|6.955e-9059.82predicted protein [Physcomitrella patens] >gi|1626... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna242rna242Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications