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Properties
| Property Name | Value |
|---|
| Product | cytochrome b5 |
| Orig transcript id | gnl|cribi|Naga_100004g31.9176.mrna |
| Orig protein id | gnl|cribi|Naga_100004g31.9176 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:290905..292023 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2398 ID=rna2398|Name=rna2398|organism=Nannochloropsis gaditana|type=mRNA|length=3437bp
GACGGGGTCGGGGCGACCACTTTACGAAAAGGGCATACTTGTGGACATGC
GAGGACATAGGGACAGTGGTGGTGATGGAAGGGTGGGATTGGGCTCTGTG
CTCGTGGAGTTGGCATTTGGAATGATCTCTTTCGTCTTCTCACTCTTTCT
GCGTTCCATCTGTACACCGTAGCTCATCTAAGCCAGAGAAAGCTGTCCCC
GCGACACGAAATCTGTGCGAGCCTTTCGGCCGCCCTTCCATGGGGACGGA
AAGCCATTCGAAACATACGACTGGACGAAGAGGGCACGATTGTCAGCCGA
CAGAGTCGTTGATGGGTGCCACGCACTCCTCCGCCTCCTCTTCGTCATTC
ACAGCGTTTGCCTCCGGCCTCCCTTCTTCATCGTCCAGCGGACCGAAAGG
CCCGAGGTTGAGGACCCCATCGACCAATCACCCGGCCCCAGATCTCCAAC
CTTCTCCCTCCAAGAGCGACACGCCCGCTCACCCCGACCGGTTGCACGGA
CGCAAGATGACGATCGACGCCATCTTGCTCCAGCAGGCACAACATCGCGA
AGCCTCGAGGGGCAACGGGAAATGTGCCCCCACCATTCTCCCATCGTCTG
CGCCCCACCAGCTTCAATACCTCCAGCGGCGGCAGCCCCGGCCCCCCCTG
GAGGGGCATGCCGAGGAGACCGACGAAGGGAACGAGATGGTGGACGGGAG
CGAGGCGGAAATGGACGAAGGGCGGAGCGAGGATGCGGAGGAGAGCTTAA
CGTCCGGCACGGACGTGGGGGGGGGGGAGGGAGGCGTCAGACGTGCGGAG
CGGAGCTCGAGCCATGCCGGGCATCCCTCTGGATTTTTGTCCCTCCAACA
GTGCGATTTGAACATAGTGAACGGGGAACTTGGCTCTGAACGCAGTGGAG
TCGGTCCTGTACCATCGTCGTCTTCCCTCCCTGCCTCCCTGCCCGCGTCA
GCCTCCACGACCTCGGCCCCCATTTCCTCGTTTCTCCACCGCATACCTGC
TGCCTTCTCCGGGACGAGTAAGGGCCAGGAACCCCTCTCTTCTTCTGCCG
CTCTCATGCAGGGAAGTGGCGTTGCCTACGGGGCCTGCTGGGAGCGTGGC
TCGGGCCCGAGGGAGGAAGGGAGGGAGGGTCCCCGCCCGGGTTCCTTGGC
GGCGAGTCGAGCCGCTGCTGGAGTCCTGGGTGAAGGTGAGCATGGCAGGT
ATTGGAAAGACCAAAGTTCGGGGGACATGCTGCGCGTGGAGACAAGCCGG
CAGGACCCGACGTCCCTCGCACCCAAGACCGGGGCGTCGGAGGGTCGATT
CCATCACCCGCACGGGCAGCCTCCCCTCCACTACCAGCAGCAACAGCCGC
AGAAACAGCCTGAGGGCCGCGCCAGTGCCCCTTCGACCGCCTACGGAATT
CCCCGGCTGGGCAAGACCCTCCTTCAACTCTTGAAAGGCGGTATCAGCCG
GGCCTCGAGCGCCTCCACCGCGTCCACCTCCTCCACCACCCCGACCAGCA
GCAGCCTCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCTGCTCCCTTTTCC
TCCACTCTGTCCCCCCCTGCCAACCCTCCTCCAGCCGCCGCCGCCACCCC
TCCCTCCTCCTCGGTGGCAGGCCCCGCCCTGCCCCTCCTGGGCGCGACCA
CGGCCGAAATCGACCGGCTGACGGGCCACCGCTCCCTGGAAGTGTACGCG
CAAATGCGTCTTGACGAACGTCGGAATCGGCCTTACTACGGCCTGTCTTC
CCTGCCTCCTTCGTGCCCGTTGTCCTTCTCCCCCTCCCCCGACGCCCCTC
TTCCCGCCGCCGCCGTTCAGCTTGCCTCCCACACCCCCTTCCCATCCTCC
TCCTCCCCCGTCCTGGAAGCCCAAGCCTTCCTCCAAAACGGGCACCGATG
CCGTCTGGTGGGATGGTTGGTGGCGGTGGGGGACAAACTCCGCATGCGCC
GGGCGACCGTGCACGTGGCCATCGCTTTCTTGGACCGCCTCTTCGAGCGA
CACGTGCCCCCCAAGGAGAAGTGGCCCATGCTGGGCGTGTCCTGCCTGCA
GGTGGCGGCCAAGTACGAAGAGGCGGAGGAGAACGTCCCGGCCGTGTCTC
AGCTCTCCCGGGCCTCGGGCATTGGCCTCAGCATCCAGACGGTCCAGCGG
TGGGAAGTGGCGGTGCTGGAGGGTCTGGGCTGGCAGCTCACCTGCATCGT
ACCCTTGCACTTCGTCGAGTTCTACATGACCCGCGGTGTCCTCTTCTGGG
GCGACACCGTGGCGGGCGGGAAGCAGCGGCTGGGCCCGTGCCTCCCTCCT
TCTCTTTCCGCAGGCTCGGCGCCGACCAAGCCTTGGGGATGGCGACAGCA
GCAACAAGGACTGCAGCACCCTCAGCAACAACAGCACCAGTACGTGGCAC
CGGCGCAGTTGCGAAAGCATGCCCACTTCTTCTCCTCCTACCTCCTTGTC
CATGAATTCCCTACCCTGGCCTTGTATCTGCCTTCCTTTGTCGCGGCCCT
CCTCCTCTACCTCGCCCGTATCTCGTTGGGCATCGCCCCGGCCTGGCGAG
AGGAACTTGTCACCCTGACAGGGGTGGAAGAATCCGCCTTGATGGGGGTC
GCGGCGCGCGTGCTGCGGTCTTTTCAGTCAGACTACCCCCAGTACCTTCT
GGGCCCGGCCGGCGCCGTGCGGGGACTGCCCGATGCTACCTCTTCGGCGC
ATTATGCCTCCGTGTGGAGAACAGGGAATGGAGGGCACGACGCGGGCGGG
GAAGGCGCCGTCTTGCTCCCGGACCCGCCCCCCTTCGACTTCCATTCGTT
GCCGCGGCGGACGGCGAGTGCTTAGGAGGCTTGATAGGGAGTTGGGGAAA
GGGGGAGATCGTGGGAGGGACGCAATCAGAGCAAAAAAGTTGGGAGCGTG
TTGTCCTTTTTCGTTCTGGGGAAATTGTGGTGGATGGTGGCGCGCGGGTA
TACATAGAGCAAAGTGTTGGCGCCTGTTTACAAGATGACGAAGATTTGTA
GGCTGTGGGGAAGGGACGGAGGCAGGAGGATGAGCAGCGAGGGAGACTGA
GGTTTGTTGTGAAGTTGATAAATAGTCAGGCAGTGGAACGGGTACAGTGA
TGTTTGTAGTGCGTGTTTAAGTAAAAATAAGCAAGCAGAGGATCAGCCGA
CCTGTGAATCGATCAAGGCGAGTGCTATATACCTCCAGGGGCACGGTGGT
TGGGGAAACCGGAGGATGGGCGGGAAGGAGTACGCGCTGCAGGTGGTACG
GGGGAATGGAGGACAAGGGGGACGGAAAGATTTGATATGGAGACGCGGCC
CGAGGGCTAGATTGTCTCTTCTGGGAATGGAGCGGGGGGGGGGCAACTTT
GAAAAAAAGATGTGCAGTCAGGCAGGTGGATGCGTAAATCGTGACTCAGT
CCTTTCGTTTTCCGTAACTGGCGCCCAGACCCTGTCT back to topprotein sequence of rna2398 >rna2398-protein ID=rna2398-protein|Name=rna2398|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MAPQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEV
LLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRA
SELPSKGGLNPFAVVVLLVAIVLGLYLSKQRTEELGSYNRRDLQMLLWAE
RGGDQNRACFHGMCQERDEHCVAKATGTRPWRNMTGTERVQRRGAGAVDM
GDYGRASRSRWLTQIL back to topmRNA from alignment at CM002459.1:290905..292023- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2398 ID=rna2398|Name=rna2398|organism=Nannochloropsis gaditana|type=mRNA|length=1119bp|location=Sequence derived from alignment at CM002459.1:290905..292023- (Nannochloropsis gaditana)
ATGGCCCCGCAACAATTTACGCTGGAAGAGGTGGCTGGGCACAACTCGGA
GAAAGACATCTGGCTCATCATCGGGAACGAGAAAACAGGTACGTCGTAAG
CCTCGAATAACGCATATCTCTTTAACGCAAATTGGGCTCATTTTTAAGAG
CATCCCTATTGAACACAATTTCGCCGGATTTGATGGTCTGCAGGGTCTCG
TCTTTGGCCTCCCATTATATTGATTCCCTTTTTGACGCGTACTCTCTTTC
ATCTTACTCATCCGGTCTATTCAGGCGGCCCGAAGGTATATGATGTAACA
AAGTACTTGGAGGAGCACCCCGGAGGCTCAGAGGTCCTTCTGGACCACGC
AGGAAAGTACGCAGACGAAATGTTTGAGGACATCGGTCATTCAGGGGATG
CGAAGGAGAAGCTCAAGACGCTCATGGTGGGCGAGCTGACGGTAAGCACA
TCATAATCGATCGTCGTATGTCACGATACAAAGCTGTTTTTCTTTCCTCG
AAGTCCATACGAGAAATATTGATCATCTCTTCGGCTCTTCTGGTGTTTGC
CTCGTTCAATGACAACGCTCCATCTCATATGCGTTTTTAATTTCTTCACT
CTCCGCCCCCCTTTGTTTCCCAGCCCGAAGACGTAGAGAAGCTCGCAAGT
GAGAAGGTGTCACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCC
TTTTGCTGTGGTAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGT
CAAAGCAGTACAAAAACTAGGAGGCAGATGACAGAGAATGAGCTGGACTG
AAGGCGCACTGAAGAGCTTGGGTCGTACAATCGAAGAGACTTGCAAATGC
TGCTTTGGGCTGAGAGGGGAGGTGATCAGAACCGTGCGTGTTTTCATGGC
ATGTGTCAGGAGCGGGATGAACACTGTGTCGCTAAAGTAAGGGGGAATGA
CGTGTGCTTGCACGGGGGCGGCCCGACGACCATGATCTAGGCCACGGGGA
CCCGGCCATGGAGGAACATGACAGGCACGGAGAGGGTACAGCGTCGGGGA
GCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCATCGAGGTCACGATG
GTTAACACAAATTCTGTGA back to topCoding sequence (CDS) from alignment at CM002459.1:290905..292023- >rna2398 ID=rna2398|Name=rna2398|organism=Nannochloropsis gaditana|type=CDS|length=3255bp|location=Sequence derived from alignment at CM002459.1:290905..292023- (Nannochloropsis gaditana)
GCCACGGGGACCCGGCCATGGAGGAACATGACAGGCACGGAGAGGGTACA
GCGTCGGGGAGCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCATCGA
GGTCACGATGGTTAACACAAATTCTGTGAGCGCACTGAAGAGCTTGGGTC
GTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAGAGGGGAGGTG
ATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCGGGATGAACAC
TGTGTCGCTAAACCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGGTGTC
ACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCTGTGG
TAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCAGCGG
CCCGAAGGTATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGAGGCT
CAGAGGTCCTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTTTGAG
GACATCGGTCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCATGGT
GGGCGAGCTGACGATGGCCCCGCAACAATTTACGCTGGAAGAGGTGGCTG
GGCACAACTCGGAGAAAGACATCTGGCTCATCATCGGGAACGAGAAAACA
GGCCACGGGGACCCGGCCATGGAGGAACATGACAGGCACGGAGAGGGTAC
AGCGTCGGGGAGCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCATCG
AGGTCACGATGGTTAACACAAATTCTGTGAGCGCACTGAAGAGCTTGGGT
CGTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAGAGGGGAGGT
GATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCGGGATGAACA
CTGTGTCGCTAAACCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGGTGT
CACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCTGTG
GTAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCAGCG
GCCCGAAGGTATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGAGGC
TCAGAGGTCCTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTTTGA
GGACATCGGTCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCATGG
TGGGCGAGCTGACGATGGCCCCGCAACAATTTACGCTGGAAGAGGTGGCT
GGGCACAACTCGGAGAAAGACATCTGGCTCATCATCGGGAACGAGAAAAC
AGGCCACGGGGACCCGGCCATGGAGGAACATGACAGGCACGGAGAGGGTA
CAGCGTCGGGGAGCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCATC
GAGGTCACGATGGTTAACACAAATTCTGTGAGCGCACTGAAGAGCTTGGG
TCGTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAGAGGGGAGG
TGATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCGGGATGAAC
ACTGTGTCGCTAAACCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGGTG
TCACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCTGT
GGTAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCAGC
GGCCCGAAGGTATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGAGG
CTCAGAGGTCCTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTTTG
AGGACATCGGTCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCATG
GTGGGCGAGCTGACGATGGCCCCGCAACAATTTACGCTGGAAGAGGTGGC
TGGGCACAACTCGGAGAAAGACATCTGGCTCATCATCGGGAACGAGAAAA
CAGGCCACGGGGACCCGGCCATGGAGGAACATGACAGGCACGGAGAGGGT
ACAGCGTCGGGGAGCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCAT
CGAGGTCACGATGGTTAACACAAATTCTGTGAGCGCACTGAAGAGCTTGG
GTCGTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAGAGGGGAG
GTGATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCGGGATGAA
CACTGTGTCGCTAAACCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGGT
GTCACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCTG
TGGTAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCAG
CGGCCCGAAGGTATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGAG
GCTCAGAGGTCCTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTTT
GAGGACATCGGTCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCAT
GGTGGGCGAGCTGACGATGGCCCCGCAACAATTTACGCTGGAAGAGGTGG
CTGGGCACAACTCGGAGAAAGACATCTGGCTCATCATCGGGAACGAGAAA
ACAGGCCACGGGGACCCGGCCATGGAGGAACATGACAGGCACGGAGAGGG
TACAGCGTCGGGGAGCAGGTGCGGTAGACATGGGGGACTATGGGCGGGCA
TCGAGGTCACGATGGTTAACACAAATTCTGTGAGCGCACTGAAGAGCTTG
GGTCGTACAATCGAAGAGACTTGCAAATGCTGCTTTGGGCTGAGAGGGGA
GGTGATCAGAACCGTGCGTGTTTTCATGGCATGTGTCAGGAGCGGGATGA
ACACTGTGTCGCTAAACCCGAAGACGTAGAGAAGCTCGCAAGTGAGAAGG
TGTCACGGGCTTCGGAGCTTCCATCAAAGGGGGGGCTGAATCCTTTTGCT
GTGGTAGTGCTACTAGTGGCCATCGTCCTGGGCCTGTATTTGTCAAAGCA
GCGGCCCGAAGGTATATGATGTAACAAAGTACTTGGAGGAGCACCCCGGA
GGCTCAGAGGTCCTTCTGGACCACGCAGGAAAGTACGCAGACGAAATGTT
TGAGGACATCGGTCATTCAGGGGATGCGAAGGAGAAGCTCAAGACGCTCA
TGGTGGGCGAGCTGACGATGGCCCCGCAACAATTTACGCTGGAAGAGGTG
GCTGGGCACAACTCGGAGAAAGACATCTGGCTCATCATCGGGAACGAGAA
AACAG back to top
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