EWM28245.1, cds2390 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|585110590|gb|EWM28245.1| (cytochrome b5 [Nannochloropsis gaditana]) HSP 1 Score: 447.973 bits (1151), Expect = 2.331e-159 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 1 MAPQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQRTEELGSYNRRDLQMLLWAERGGDQNRACFHGMCQERDEHCVAKATGTRPWRNMTGTERVQRRGAGAVDMGDYGRASRSRWLTQIL 216
MAPQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQRTEELGSYNRRDLQMLLWAERGGDQNRACFHGMCQERDEHCVAKATGTRPWRNMTGTERVQRRGAGAVDMGDYGRASRSRWLTQIL
Sbjct: 1 MAPQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQRTEELGSYNRRDLQMLLWAERGGDQNRACFHGMCQERDEHCVAKATGTRPWRNMTGTERVQRRGAGAVDMGDYGRASRSRWLTQIL 216
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|1210513892|dbj|GAX27191.1| (hypothetical protein FisN_13Lh257 [Fistulifera solaris]) HSP 1 Score: 122.479 bits (306), Expect = 4.294e-32 Identity = 65/133 (48.87%), Postives = 96/133 (72.18%), Query Frame = 0
Query: 4 QQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSK--GGLNPFAVVVLLVAIVLGLYLSKQRTEE 134
+++TLEE+ HN+++D WLIIGN GGPKVYDVTKYL++HPGG+EVLLD AG+ ADE FEDIGHS +A+++L ++G ++ A EK+ A+E SK GG+ ++V L+AIV G+ ++ +T++
Sbjct: 5 KEYTLEEIVKHNTQEDCWLIIGNASNGGPKVYDVTKYLDDHPGGAEVLLDVAGQDADEFFEDIGHSKEARKELSKYLIGNFK---LDAAALEKMKAAAEKRSKNEGGMVS-TLLVALIAIV-GVAVAYYKTQQ 132
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|20531717|gb|AAM27441.1|AF503284_1 (microsomal cytochrome b5 [Phaeodactylum tricornutum]) HSP 1 Score: 118.242 bits (295), Expect = 2.101e-30 Identity = 58/132 (43.94%), Postives = 90/132 (68.18%), Query Frame = 0
Query: 2 APQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVG--ELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQR 131
A +++TL+E++ H + + WLIIGN GGPKVYDVTKYL++HPGG+EV+LD AG+ ADE FEDIGHS +A+ +LK +VG ++ + K+ ++ ++A + S G+ V++ L AI G Y ++ +
Sbjct: 3 AEKEYTLDEISQHTTTESCWLIIGNASNGGPKVYDVTKYLDDHPGGAEVMLDVAGQDADEFFEDIGHSKEARAELKNYLVGNFKIDAATLAKMKADAEAKAQQKNSGTGI-MLIVLMALFAIAYGYYQTQMK 133
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|1210513254|dbj|GAX27651.1| (hypothetical protein FisN_13Hh257 [Fistulifera solaris]) HSP 1 Score: 117.857 bits (294), Expect = 3.006e-30 Identity = 62/131 (47.33%), Postives = 92/131 (70.23%), Query Frame = 0
Query: 4 QQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQRTEE 134
+++TLEE+A HN+++D WLIIGN GGPKVYDVTKYL++HPGG+EVLLD AG+ ADE FEDIGHS +A+++L ++G D + K + S+GG+ ++V L+AIV G+ ++ +T++
Sbjct: 5 KEYTLEEIAKHNTQEDCWLIIGNASNGGPKVYDVTKYLDDHPGGAEVLLDVAGQDADEFFEDIGHSKEARKELSKYLIGNFKL-DAAAMEKMKAAAEKRSKSEGGMVS-TLLVALIAIV-GVAVAYYKTQQ 132
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|219129248|ref|XP_002184806.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403915|gb|EEC43865.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 115.546 bits (288), Expect = 1.883e-29 Identity = 57/132 (43.18%), Postives = 89/132 (67.42%), Query Frame = 0
Query: 2 APQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVG--ELTPEDVEKLASEKVSRASELPSKGGLNPFAVVVLLVAIVLGLYLSKQR 131
A +++ L+E++ H + + WLIIGN GGPKVYDVTKYL++HPGG+EV+LD AG+ ADE FEDIGHS +A+ +LK +VG ++ + K+ ++ ++A + S G+ V++ L AI G Y ++ +
Sbjct: 3 AEKEYILDEISQHTTTESCWLIIGNASNGGPKVYDVTKYLDDHPGGAEVMLDVAGQDADEFFEDIGHSKEARAELKNYLVGNFKIDAATLAKMKADAEAKAQQKNSGTGI-MLIVLMALFAIAYGYYQTQMK 133
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|676388169|ref|XP_009037363.1| (hypothetical protein AURANDRAFT_16956, partial [Aureococcus anophagefferens] >gi|323452124|gb|EGB07999.1| hypothetical protein AURANDRAFT_16956, partial [Aureococcus anophagefferens]) HSP 1 Score: 110.923 bits (276), Expect = 2.455e-28 Identity = 50/77 (64.94%), Postives = 65/77 (84.42%), Query Frame = 0
Query: 8 LEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGEL 84
L +VA H+ E+D ++IIGN+ GGPKVYDVTKYLE+HPGGSEV+ + AGKYAD+MFEDIGHS +A+++LK +VG L
Sbjct: 1 LPQVAAHDQEEDCYIIIGNKGNGGPKVYDVTKYLEDHPGGSEVICELAGKYADDMFEDIGHSNEARKQLKEFLVGPL 77
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|1072227512|gb|OEU12251.1| (cytochrome b5 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 108.227 bits (269), Expect = 1.400e-26 Identity = 47/79 (59.49%), Postives = 65/79 (82.28%), Query Frame = 0
Query: 4 QQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVG 82
+++T EV+ H E+D W+IIGNE GG KVYDV+KYL++HPGG+EV+LD +G+ ADE FEDIGHSGDA+++LK ++G
Sbjct: 10 KEYTSAEVSKHTLEEDCWMIIGNESNGGSKVYDVSKYLDDHPGGAEVMLDVSGQNADEFFEDIGHSGDARKELKKYLIG 88
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|443720165|gb|ELU09965.1| (hypothetical protein CAPTEDRAFT_153099 [Capitella teleta]) HSP 1 Score: 107.842 bits (268), Expect = 2.017e-26 Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 0
Query: 1 MAPQQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGELTPEDVEKLASEKVSRASELPSKGG-----LNPFAVVVLLVAIVLGLYLSKQ 130
MA +Q T EE++ HN+ +D+W+ + N KVYD+TK++EEHPGG EVLL+ AG YA E FED+GHS DA+E + VGEL D EK +S + S + ++GG L P A+ AI+ + S +
Sbjct: 1 MAAKQITKEELSKHNTARDLWIAVHN------KVYDITKFIEEHPGGEEVLLEQAGNYATEQFEDVGHSTDARELIMKYEVGELVEADHEKASSMRTSPLAPDSAEGGSMMSWLVPLAIAT-FAAIIYRYFASNE 128
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|298707768|emb|CBJ26085.1| (microsomal cytochrome b5 [Ectocarpus siliculosus]) HSP 1 Score: 107.842 bits (268), Expect = 2.518e-26 Identity = 61/132 (46.21%), Postives = 90/132 (68.18%), Query Frame = 0
Query: 5 QFTLEEVAGHNSEKDIWLIIGNEKTGG-PKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVG--ELTPEDVEKLASEKVSRASELPSK-GGLNPFAVVVLLVAIVLGLYLSKQRT 132
++++ EVA H +++ WL+I + G PKVYDV+ YL +HPGG+EV+++ AG+ A MFEDIGHS DA+ ++K +G +LT E+ K+A E +A + GGLNP AV+VLL+AI +G Y S QR+
Sbjct: 9 EYSMTEVATHTTKESTWLVIKDMNDGDTPKVYDVSSYLNDHPGGAEVMMEVAGQDATNMFEDIGHSSDARTEMKKFQIGLLKLTDEEKAKIAQEAAKKAERASRQGGGLNPLAVLVLLLAISVGYYYSNQRS 140
BLAST of EWM28245.1 vs. NCBI_GenBank
Match: gi|397647796|gb|EJK77858.1| (hypothetical protein THAOC_00279 [Thalassiosira oceanica]) HSP 1 Score: 107.842 bits (268), Expect = 2.583e-26 Identity = 46/81 (56.79%), Postives = 66/81 (81.48%), Query Frame = 0
Query: 4 QQFTLEEVAGHNSEKDIWLIIGNEKTGGPKVYDVTKYLEEHPGGSEVLLDHAGKYADEMFEDIGHSGDAKEKLKTLMVGEL 84
+++T+ EVA HN+ +D WL+IG++ TGGPKVYDV+ YL++HPGG+EV+LD G+ ADE FEDIGHS DA+++L ++G L
Sbjct: 8 KEYTMAEVAEHNTAEDCWLVIGSDATGGPKVYDVSTYLDDHPGGAEVMLDVGGQDADEFFEDIGHSNDARDELAKHLIGTL 88 The following BLAST results are available for this feature:
BLAST of EWM28245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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