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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100348g5.2076.mrna |
| Orig protein id | gnl|cribi|Naga_100348g5.2076 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:204149..205580 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2364 ID=rna2364|Name=rna2364|organism=Nannochloropsis gaditana|type=mRNA|length=1538bp
ATGTACAGCCGGCACGTTAGGCGGAAAAATTGACGTGCACCCTCACCAAC
AGTTTTGAATGATGACTCAAACCCTCTCTTAAATGCCATGCTGCCTCCTA
CGGAAATCGTGCTTATGCTTGGCTTTCTTGTGCTTCCAAGCATTCCAGAG
CGCCATCATCGCTTCAAACGAGGGCGCTATTATGCTCAAAACACGTGGGC
ACACAGCGTATTGAGGAACTTCCTTTACCAATACAGGCTGCAATGCGTGT
AGTTATTACCATGACGGGGCTTTTCGGAACAGCATTTCGTCGCCCATTTC
TCCTGTGAGCTGGTAAATGGCAGAGGCGGAGGAAACCCGCTTAGAAGCCG
TGCTTGGTCTCAGCGTCGAGGGTGATGAGGGGGAGAATAGCCAGGATAAG
CATCACACGAGGGAAGTGGAGGATGCGCTCATCTTCGGAGTGGGAGCCTC
TCCCGTCAGTGATGTATGCGGAAGCCATTCCCTCCTCTCTGAAGCCGCCT
TGAAACACGTCGTTCCCTCCCCGCCTTCGTCCAACTACCTTTTGCGCGAC
GGGGACAACACTTTCTTGAGCGTGGCGCCCGCCGATCCTCACGTATTACC
AAGCGCCCGAAGCCTGCCTACCCTCTCCTCCACCTCGTCCTTGGTCGTGT
CTCCCAGCCCGGTTGATCCCTACCCCCTCCCGGGGGCCCCCGAGGACTAC
GCCGGTCTCTTTCCCGGACCTACCGACCCCCACCACCCGCCCGACATCCA
GATCTCTCCCCCCCTCGTCTTTCACCCTCCCGCAACACGGAGCGGCGAGG
GGGGGCATGGGGTTGGCCGAGGAGGGTGGAGGGGAGGTGGTCAAGGGCGT
GCCACCGCGTGCATGGACACCGTTCCCGGGGGCGGCATGGGCTGGACAGG
TCTTGTAAAACCAACCGGGGAGGGCACAATGGTTGGGGACGTGGAAGGAA
GGAAGCCGACGGCCGGGAGGGTCCCTGCGTCCTGGGAGAAGAGCCGGGGC
GCGCGGAAAGGAGAGGAGGAGGGAGGGCCTGTGGGAGGTACGGGCTCGGT
GGAGGCGGCGGAGGGCACCGCGGGAGAGATAACCGCCCCTTGCGTGCAAC
CGAAAAAGCATGCCCCGTTGGGGCAATGGGTAACGCCCCCCCAGCCCCAA
TATTCAATTTTTAAAAATCCGTTGCGGGATGTGGACGCGGCTGGCAGGTC
GGGGAGGACGGGAGCCCGCACGGGCCAGGGGCTTGGAAGGGGAGGTTCAG
GGGTGGGGGAAAGAGAGGGAGGAAGGAGCGCGAAGGCGGGGGGCGGGGAT
GAGGCGGATGGCGGAGAAAAAAGTGATGATGGTGAAGGAGGAGGAGAAGG
AAGTGGTGGAGGAGGAGGAGGAGGTGGTGCTGGAAAGGGCAAGAGCGAGG
GGCAGGGAAAGAATTTGGGCGGCAGAATGAGGACTTTTCGAGCCCTGCTA
CCAAAGACCCCAAGGATGGGATGGGGGATGGGCAGGAGAAAAGGTGAGAC
CGAGATGCCCCCTCCCTCCCGCCCTCCCTCCCGCCCTC back to topprotein sequence of rna2364 >rna2364-protein ID=rna2364-protein|Name=rna2364|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MRRTSSHLLLLSLLVACVFNDALVMKGFSPQKNPTKVSIPAPQGARKEGK
QASLWQANLRHVASAAFGGGVYLLSPSIMHAEVVETVSSTTVNTRAAASA
LYSAPMVVAAEQTVWESTCLGFGCGSYNGPDYGGAPKLETGEKNIDMPSF
LKLVEEKRIEKVELLEGGNVAYAYVAPRRGDKEGAGEGKEAGAERVRIGE
GFPVENGKTWSSPLWMVRILKDKQIPYTLGFDFSGSDKVTRALSGFAN back to topmRNA from alignment at CM002459.1:204149..205580+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2364 ID=rna2364|Name=rna2364|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp|location=Sequence derived from alignment at CM002459.1:204149..205580+ (Nannochloropsis gaditana)
ACGCCCAGACCCGGTAATTGCATAGAAATGACAGCATTCCGTCTGCCCTC
CCGCGGCCAGGCACCGCTCACGTTTGCGGTGCAAATCCTCACGAGTCTAC
GTTTGTAAACTTTTGGCAGGCCGTTGCGTAGCGGAAGGAAACGTAGGGCG
GTGTCTTCCCATCCCGTGCGCAGTCACGACTTCTTCCATCGGCACGAAGG
TCAGAGCACCATGAGgagaacctcctcccacctcctcctcctttctttgc
TGGTGGCGTGCGTGTTCAACGATGCCTTGGTCATGAAGGGATTTTCTCCC
CAAAAAAATCCCACCAAGGTGTCCATACCCGCCCCCCAGGGcgcaagaaa
agaaggcaagCAAGCCAGCCTCTGGCAGGCAAACTTGCGACAcgtcgcct
ccgccgccttcggggggggcgtctacctcctctctccgtctATCATGCAC
GCGGAAGTCGTCGAAACAGTCAGTAGCACCACCGTCAACACCCGCGCGGC
TGCGTCGGCTCTGTACTCTGCGCCTATGGTGGTAGCCGCTGAGCAGACGG
TATGGGAGAGCACATGTCTGGGCTTTGGGTGTGGGAGTTACAACGGCCCT
GATTACGGCGGAGCACCCAAGTTGGAGACCGGGGAAAAGAACATAGATat
gccttccttcttgaaactggtggaggagaagcgaaTCGAAAAAGTGGAAC
tgttggaggggggaaatgtgGCATATGCGTACGTAGCGCCAAGGCgtggg
gacaaggagggcgcgggcgaggggaaggaagcaggggcggagagggttCG
AATCGGGGAAGGTTTCCCCGTCGAAAATGGAAAGACGTGGTCAAGTCCAC
TGTGGATGGTGCGCATTCTGAAGGACAAGCAGATCCCGTACACCTTGGGG
TTCGATTTTAGTGGCTCCGACAAGGTAACTAGGGCCCTATCTGGTTTTGC
GaattgaggaggaagggagggagaggagggagggaaggagggcaaaaaCA
GCAACGACGAGGCAGGTGGTTTGCAAGCCCaggcaggaggaaacgtCGCG
GCCCATGATTATGATGGATCCGGCCCCCTGTAGGTAGCACATTTACGGCG
CGGAACGCGAAGCAGACGTGCTctggggaaaaaggaaaaaaataacGGAA
GGAAAGCTGTGCTCGTCCATCGTCCACGGGTTAATGTTTTTCACCCCCTG
TCTAGCTCCACGTCTGACTCGGCATGTGCTTcgcccgtccttcttcctag
GGGGCCTCCACCCGGCGCCTggattccctccccccctcaaaACGACGGAC
AGAAGATTTCTGAAAAGCTGACTGGCACGCTCCTTTTGTCCGCGCAATTA
TTCAGAGGCAAGCCTCGAGACAGGCAGGAAGCGAGCATTACTACTATGGC
ACCCGTATACCTGATAATTtaccgtccttcct back to topCoding sequence (CDS) from alignment at CM002459.1:204149..205580+ >rna2364 ID=rna2364|Name=rna2364|organism=Nannochloropsis gaditana|type=CDS|length=747bp|location=Sequence derived from alignment at CM002459.1:204149..205580+ (Nannochloropsis gaditana)
ATGAGgagaacctcctcccacctcctcctcctttctttgcTGGTGGCGTG
CGTGTTCAACGATGCCTTGGTCATGAAGGGATTTTCTCCCCAAAAAAATC
CCACCAAGGTGTCCATACCCGCCCCCCAGGGcgcaagaaaagaaggcaag
CAAGCCAGCCTCTGGCAGGCAAACTTGCGACAcgtcgcctccgccgcctt
cggggggggcgtctacctcctctctccgtctATCATGCACGCGGAAGTCG
TCGAAACAGTCAGTAGCACCACCGTCAACACCCGCGCGGCTGCGTCGGCT
CTGTACTCTGCGCCTATGGTGGTAGCCGCTGAGCAGACGGTATGGGAGAG
CACATGTCTGGGCTTTGGGTGTGGGAGTTACAACGGCCCTGATTACGGCG
GAGCACCCAAGTTGGAGACCGGGGAAAAGAACATAGATatgccttccttc
ttgaaactggtggaggagaagcgaaTCGAAAAAGTGGAACtgttggaggg
gggaaatgtgGCATATGCGTACGTAGCGCCAAGGCgtggggacaaggagg
gcgcgggcgaggggaaggaagcaggggcggagagggttCGAATCGGGGAA
GGTTTCCCCGTCGAAAATGGAAAGACGTGGTCAAGTCCACTGTGGATGGT
GCGCATTCTGAAGGACAAGCAGATCCCGTACACCTTGGGGTTCGATTTTA
GTGGCTCCGACAAGGTAACTAGGGCCCTATCTGGTTTTGCGaattga back to top
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