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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100100g2.8926.mrna |
| Orig protein id | gnl|cribi|Naga_100100g2.8926 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:595413..596247 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna236 ID=rna236|Name=rna236|organism=Nannochloropsis gaditana|type=mRNA|length=3002bp
ATGCAACAACTAATGGCATTCTGTGCCACCATCCAGGTCGGTCATTCATC
CCACCACGTCTCACTTTTTGTCCATGCATACGTCTACCAAACTCTAAGCC
AGGCCCGTGAGATGAGTTACCATGCGGCCGGGAACTACGGGCCACCGCCA
GGCAGCGGAGGAGGAGGAAGAGGTTACGGTGGGCCCGACCGGAAACGATA
CCGAGGAGACGAATCCCATGGAGGCGGATATCACGGAAATCATGGTGGAG
GTGGCGGGAGGTACCGCGGCGACCGGGCACGGTATAACCAAGACAGACGA
GGTGGCGATCGAGGCCCCCCGGCTAAGAAACCGAAAACAAAAGAGGACGA
AATCATGACGCAAATCAAAGCTTTGTTGGTGCGCGTTGGAGACTTCCACC
ACATAACTACGTCTCTTTCCAGCTTGGAGGAGAATGTCGAGGGTTTGGCA
GGGGCATTGGGTGATGAGCTGGCTACGTTTGGAGACTTGATCGCGGACTT
CGTGTTGACCGCTGCTTGCCAGCTTTCGCTCCAGACCCCCGTGTATGCCA
CTCTAGTGGGGCTCTTGAATGCCCGGGACGAAGACTTTGGCGCCAAGGTC
GTTCAAGGGGGGGCGGTGCGATTGGACGCCATGATCCGGCAGGGCCGTTG
GATTAACGCGAAGCTGGTCCTCCGCTTCCTCTGCGAGCTCGTGAACGCCC
GCGTGGTGAAAGCAGAAGGCGAAGGGAGCCTGGGAGAGGTCCTGACGACA
CTGGCCGGGCCCCTGAAGGAGCCGGATGCTGCGGTCCCCCCGGCGAGGAA
GGACTTGTACCTGTATCTGGTCGTGTCTGTGCTGCCCTGGGTGTGGGATG
CTCTGGCGCAGGAGTGGCCGGACGGTCTCCCGGCCCTCTTGGAGACCACC
TTCGCGTATGCAGACAGGCGAGTGCCGCTGTACTTGAAAAAGGGTGTTCG
CTGTGTCTTGGACGCGAGCTTAGAGGACGAGGAGGACGGGGTGGAGGAGG
CAGGAGCTAGTGGCCACCCCGTCGAGCCTGCCACGGACTCGATCCAGAGG
GCCCTGAGGGTGGTCAAGACCCTGGCGGCCACTCTTGAAGAAGGTCAGGC
CTCTCTGGAGATCAACGCCATCGTCAAGCCCTGGAAGGGCGTGAAGGAGG
AGTTGTCTCAAGGCATTCGGCACGCGATCCCCCCCCTCACGCTGCCCGAC
CCCGACCCCATGGTCCTGGCGACTGGCGGCTTTCCCCTACCCCTGCACCC
GTGTTTCGCCGAGTTCGACCTCTTCGATGCGGAAAGCGGAGGCCAAGCCG
CCTCTGTGGCCACGCTACCCCCGATAGAGCGGTGGGTGCTGCGGGAGTGC
CTGAAAGACAGCTTGGTTACTTTTCGCCCTTACGTGAACGAGGCTGGGAA
CAAGCGGGGCTCTTTTGCGGCAGAAGTCGAGCAGCTCTATTCAATTTCTT
ATCTAGCCCCGCCGGAGGTGGCCACAGAGTTCTTGGTGGCGGAAGTTCTG
CTCCTTTGGCTCGTGCAGCGCCCCAGTCGCGACCTCGCCTACTTGCACCG
GCTGCTTCTGCAGGTGGTTCAGACCCCCAAAGCCGCGGGATCCATGGCTC
TGGGCTTGCATATACTGTTTCAAGACTACTTGGAAGTGCTCGACCATGGC
GCCGTGACACAACTTGCCAACTGGTTCGGCGCCCACTTGACCAACACGCA
GTTCACGTTTCCCTATTGGGACGCATGGGCCGGCCTGGTCGCTGAGCAGG
AAGCAGAGGATCACCCGCAGCGGTACTTTCTGCGGCGGGCTTTGGATGTG
GCGGCGCGTCAGAGCTACGTTGGGAAGGTGAAAGAGCATATCCCTGCCTC
CCTCCACCCCTACGTGCCCGAAGACCCCTACTCGCTCTCTCCCTACCTGC
CTCGGGCCGCGGCCGTGGAAGAAGACAACGCGGCGGACGCGGCCTCGACG
CAGATCCTGAAGGTGCTTGTGCGTCATTTCCAGGCGGTTCTTCAGGGACA
AATGCCGGCCGCAGAAGTGCAAGCCTGGCTTGATTCGAGCGTGGCCCCGC
CAGCGGATATCGCCACTTCGGACCCGCTCTGGCGTGTGACTCTGGTCGCT
CACGCCTTGTCACGGATCTCGGACGACACCGTGGCGCATTTGCCCGCGCT
CTTGGAGAAGTGCTTGGGCTGGTTCCGCCAGCTGTTCGAGGCGGACGAGC
ACCAGCTGCGAATGGTGGAGGCCCTGGCCGAGGTATGGGCCGGGAGCCCT
CAAATGCTGCTGCTGGCACTCAACGCGGTCATGCGCATGCACATGGTGCT
CCCCGTGAACCTGGTGGCTTGGTTGGTGCGCCCAGAGACGGCACGCCGGT
ACGCCCAGGACGCATTATATCACGACCTGTTTGTGGACGCCGTCGACCGC
TCGCTCGAGTCCGTGGCGAACTATGGAGAGCTGATCAGTCGAGCTTTGGG
CCCTCATCCGCCGGCGACAGGTCAGTCGGAGGAAGCGAGGGCAAGGCAAT
GCGCCGGAGAGGAGACGGTGGAGCACGGGATAGTGGCAGTAGAGAACGCC
CAGGACCTTCTGTTGGAGCTTGTCGAGGGCTTGAGCAAGGTGCTGGGGGA
AGGGCTAGCGTCTTCTGCTGAACAAGCCAGTGAATGGGTTCGAGCAGGTT
TGGCATATCTGCGAGGAACGTTGCAAATATATTTGCAGCTGGAAGAGAAA
GGGTTAAATCGGGTCATCCCAGGGACAGAGCCTGTGTTCGATCTGAGCAA
GGTGGAGGAGTCCATAGGGCCTCTCGAGTCCTTACACCCAGCTCTTCATG
GCGTGATGCTCGACGTTCGACGATATATCGATGATCGTCAGGTTTTCGGG
GGGGTCCACGCCCATGGGCAGGTCTTCTCGGACGAGGAGTAGGTGCCTAG
GGGAGGAACAATATGAGAAGAGCTTCAGGTTAGCAATATAAGGCGGAAGT
GGATGAGAGTCGTCCACAAAGAATAAAAGCAATCACTAACAAGTGTATTG
GA back to topprotein sequence of rna236 >rna236-protein ID=rna236-protein|Name=rna236|organism=Nannochloropsis gaditana|type=polypeptide|length=86bp
MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYV
ALEESLRERVNEKRAILDKEPVHLGGVLTTIKEAAE back to topmRNA from alignment at CM002455.1:595413..596247+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna236 ID=rna236|Name=rna236|organism=Nannochloropsis gaditana|type=mRNA|length=835bp|location=Sequence derived from alignment at CM002455.1:595413..596247+ (Nannochloropsis gaditana)
CCACCCTGGACGACGAGACTTTTGGTCGCTTTTGGAATCTGCAGCATCTC
GGATGTCGAAGAAGCCACTCGGGACCTGACTTAGGCACTTTGATGCGTAT
GTAGTGTGCCGGGTTGAGACAGGATTTCCGGGTCTActcactccttctcc
ctcctctcctctctcccccttaGACAAGCATGACGCTGGGGACAGGCCTC
GTCGGCGCTTCCTTTGGCATCTTTGTGAAGCTGGCCAGCAACAGCATGCG
CAAAATACCACTTCGACGAGGTGCGTAGTCGCGATTTGCATATCTGAAAT
GTGATTGAAGACCCCTTTAGTGTGCCTGAGCGAAGGTAGTCACGTGGCGT
TCGGCTTGATGCGATCAACATGATTAACGAGTGCCGCCAAAGAAGCTTTG
TGCGGCCGCGCAACAGTCAATGCATGTTTTCCTCAAGTGTCTATCAGTGT
GACTACTGGATATTCTGTAGTAGCTGGCCCAAGTCCGCTGCGTAACGACA
ATAGGTGTCACACCTGCCCGGTATTTCGTATCTGTGAGAGCTCATCGTAC
CAGCCGCCATCTTTCCGGAAACGATTTATCACAGAGCCTTGGGATTATCC
CATCTTCATGCTTGTGGGGGCCTGGGTTGGTTACAAGTACGTGGCGCTGG
AAGAAAGTCTGAGGGAGCGGGTGAACGAGAAGCGCGCCATTTTAGACAAG
GAACCGGTGCACCTGGGCGGCGTTCTGACAACGATAAAGGAGGCAGCCGA
GTGAAATCCTGTCACACTGCCTGCCCTTGGCGACCGCATTGAGGCCTTCA
AACGAAGAAAGTGTCTTGGCTATCTTGGAGTTTTG back to topCoding sequence (CDS) from alignment at CM002455.1:595413..596247+ >rna236 ID=rna236|Name=rna236|organism=Nannochloropsis gaditana|type=CDS|length=522bp|location=Sequence derived from alignment at CM002455.1:595413..596247+ (Nannochloropsis gaditana)
ATGACGCTGGGGACAGGCCTCGTCGGCGCTTCCTTTGGCATCTTTGTGAA
GCTGGCCAGCAACAGCATGCGCAAAATACCACTTCGACGAGAGCCTTGGG
ATTATCCCATCTTCATGCTTGTGGGGGCCTGGGTTGGTTACAAGTACGTG
GCGCTGGAAGAAAGTCTGAGGGAGCGGGTGAACGAGAAGCGCGCCATTTT
AGACAAGGAACCGGTGCACCTGGGCGGCGTTCTGACAACGATAAAGGAGG
CAGCCGAGTGAATGACGCTGGGGACAGGCCTCGTCGGCGCTTCCTTTGGC
ATCTTTGTGAAGCTGGCCAGCAACAGCATGCGCAAAATACCACTTCGACG
AGAGCCTTGGGATTATCCCATCTTCATGCTTGTGGGGGCCTGGGTTGGTT
ACAAGTACGTGGCGCTGGAAGAAAGTCTGAGGGAGCGGGTGAACGAGAAG
CGCGCCATTTTAGACAAGGAACCGGTGCACCTGGGCGGCGTTCTGACAAC
GATAAAGGAGGCAGCCGAGTGA back to top
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