EWM30458.1, cds236 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|585113121|gb|EWM30458.1| (hypothetical protein Naga_100100g2 [Nannochloropsis gaditana]) HSP 1 Score: 175.637 bits (444), Expect = 1.032e-55 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 Query: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRAILDKEPVHLGGVLTTIKEAAE 86 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRAILDKEPVHLGGVLTTIKEAAE Sbjct: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRAILDKEPVHLGGVLTTIKEAAE 86
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|544212790|ref|XP_005536543.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449017105|dbj|BAM80507.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 56.6102 bits (135), Expect = 7.840e-9 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 0 Query: 9 GASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRA 65 GA FG+ V+L SN+++K+PL R PW++ +F GA+VG+K LE L +R+ RA Sbjct: 7 GALFGLAVQLMSNALQKLPLMRRPWEHVLFAAGGAFVGHKLGDLEVELTQRIEAHRA 63
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|1210526087|dbj|GAX15005.1| (hypothetical protein FisN_12Lh299 [Fistulifera solaris]) HSP 1 Score: 53.9138 bits (128), Expect = 1.439e-7 Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0 Query: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRA 65 M L T L G S G + SNS+RK+P+ R+PW++ ++G + G KY EE+L +N R+ Sbjct: 1 MGLFTTLFGGSLGFAAQAYSNSIRKVPISRQPWNHLGMFILGCYAGAKYPKWEETLVNDINAMRS 65
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|1210517465|dbj|GAX23722.1| (hypothetical protein FisN_12Hh299 [Fistulifera solaris]) HSP 1 Score: 53.9138 bits (128), Expect = 1.486e-7 Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0 Query: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEKRA 65 M L T L G S G + SNS+RK+P+ R+PW++ ++G + G KY EE+L +N R+ Sbjct: 1 MGLFTTLFGGSLGFAAQAYSNSIRKVPISRQPWNHLGMFILGCYAGAKYPEWEETLVNDINAMRS 65
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|855315490|ref|XP_012898863.1| (uncharacterized protein [Blastocystis hominis] >gi|300123543|emb|CBK24815.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 53.5286 bits (127), Expect = 1.691e-7 Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 0 Query: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGY---KYVALEE-SLRERVNEKRAILDKEPVH 73 M+ GL G G+ KL SNS+RK+P REPW++ I+M VG + Y K++ E+ SLR + + LD+E V+ Sbjct: 1 MSFIAGLTGCCIGLLTKLYSNSLRKLPYMREPWEHLIYMGVGGFSFYYAKKFIDREKNSLRTMLVD----LDREDVY 73
BLAST of EWM30458.1 vs. NCBI_GenBank
Match: gi|116779889|gb|ABK21463.1| (unknown [Picea sitchensis]) HSP 1 Score: 52.7582 bits (125), Expect = 3.921e-7 Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0 Query: 1 MTLGTGLVGASFGIFVKLASNSMRKIPLRREPWDYPIFMLVGAWVGYKYVALEESLRERVNEK 63 M G L GA G+ +L SN MRK+PL R PW++ I M +GA + + E L+E +++K Sbjct: 1 MVTGVTLAGACLGLTTQLLSNGMRKLPLMRHPWEHVIGMGLGALFTNQLIQWEAKLQEDLDKK 63 The following BLAST results are available for this feature:
BLAST of EWM30458.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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