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Properties
| Property Name | Value |
|---|
| Product | mpv17-like protein |
| Orig transcript id | gnl|cribi|Naga_100109g6.6602.mrna |
| Orig protein id | gnl|cribi|Naga_100109g6.6602 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:181339..182831 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2357 ID=rna2357|Name=rna2357|organism=Nannochloropsis gaditana|type=mRNA|length=1834bp
ATGATAGTGCTATGGAGAAAGTCATGGTGAATTGTCCTGAGGATTTTTGA
AGCACTGCCCGCCACAAGTGTGAGCGAGCCTTGCGCGCGGCTCTGGCATT
CGTCAAATGGCGCCGTGCACACTTTTGCAAAACTCTTGTATTTTTTGTAC
ATTGTCAAGTTATTCTGGCTCAGGCGTGCCAACAACGGTTTTTTACCTCA
CGCGTGCACTGACTATCGCGGCCTAGTGCCCTCCGGGGACACACACTTCG
AGCCCAGATTGGAGGCATCAAAATTAACCTCCTGCATCCTTGCGACGCTA
TTCTCACTTCGCTTCTCGACATATCTACGCTGCAATTCGACATAAACTTT
TTATGAATAGGTTGCTTTTTCATGTTTAAGTATAAGGGGAAATTTAAAGT
TGTACTGTAGATGTCATGACCCTGCCGACAGCTGCGCTGCAATCCCGCTT
TGTTGGGTCCTCGACAAATTTGGGCGCATTGCTGGTTCCATTACCGTACT
TACAGGAAGACCAAGAACATGATTCGCCCCAAGAATACCTTGCAGACACA
GAAAAATGCTTAGAAGTCGCTCTTCAAACCCTCAAAAGTGAGGGCGCGGT
CATATTACAGGACTGCCTCTCCCCCTCCAGTTTAGAAAAGTGTCGCGGTG
TTATTGAAATTGTGGTGGATGCCCTCCTCTCTGCCGTGGCTACAAATTCT
CTTATCGCCCCTATCAACAAAGTCCAGTCCCTCCCATTTGCCGCCCAATA
TTGCACGCGGACAGCAGGGCCTGGCATGAATGGACATTTGGACCCTGGAA
TTTCACGCCACGATAGCATTCCCAGCGGGTCTGATACGGTCTCTTGCAAC
GCCACGGGTTTCAATTCGTCGCGCGAACTTCCTCATGACCGCGAAATCAA
AGCTCTATACTCGGCATTTGACGACGCCAAAGTTGTAAGCGCAGATGTGC
GGCGGCATCTGGGCATCACACGCATCGCCAAAATCGGAAGGGGGAAGAAG
AACGTCCACTTTGACCCGTACTACACCCCTTTGTCCACAACAAAGAACAA
GGTTAAGAAGACATATGCGCCGGACACAGAAACCTTGTCATCTAAGCCCA
TGGATGAACATGGTATTTTGGAAAACACACAGCCTTTCAACTCCAAGTCG
CCCTCCAGAGCCCTCTGTAGCCATCCAACCGCCGCGGCAGCAACCCCAGA
GGCGTCTAGCCCACCCTATGTCGCTGCCCCATTTGGCAATAGCTTGCATC
CGCATGCGGCGATGGAAGCTTTGGCCGAGAGTGCAGGAGTGGCTCGGCTT
GTGCGGGCGTATTGTGGGGATGACGTCACACTCGCCGAGACGGGTATCTC
GATCACCCGCCCGGAGGGAGAGGGACTTGAATGGCATGCAGACGGTAGGG
AAGGCGAGTGTACGGTGATTATGAGCTTGGAAGATATAAGGCAAACAATG
GGCAGGCTGGGGTTGATCCCACGGAGCCATTTGATGCTGGACCGGGAGGC
CAGCGAGGATTTTGACCAAGATTTGATGGATCTCGTAGGGAGGGAGGGAG
GGAGGGACGGTGCCGTGTGGTACGCGTACCGGAAGGGGCAACCGATTGTA
TTTGATGCCCGGACTGTGCACACGGCGGAGGGGAGTGTAGAAAGGGGGAG
AGGACAGGAAAAAGGAAGGGTAGTGGCTCGGGAGGAATGTCGAGTGATCT
TGTGGTGGATTTACAACGGACAGTGAGTGGAGGGATGCTCCGTGCTATAA
AGTATCCCCCCCACAAACATAAAAAAATCAAAAAAATCTCGAGGAGGAGC
GAAAGCTCATGCAATCCCTCAACCGTGGATTACT back to topprotein sequence of rna2357 >rna2357-protein ID=rna2357-protein|Name=rna2357|organism=Nannochloropsis gaditana|type=polypeptide|length=275bp
MRLAVGLLSVVVAMASVLSSAHPICCTVNKVRKLPSTPAVTLASLQGGRI
LRPDRRSHRHMPWSAPYAPRGMLSRRAMASIPSPLGLLKAFGKAYSNWMM
EQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANA
GFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAA
IMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHL
HGLSTGTLGIVWATYLSYVTHTEGH back to topmRNA from alignment at CM002459.1:181339..182831- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2357 ID=rna2357|Name=rna2357|organism=Nannochloropsis gaditana|type=mRNA|length=1493bp|location=Sequence derived from alignment at CM002459.1:181339..182831- (Nannochloropsis gaditana)
GACGGCTCAACTTAATCCCTCGTCAATTAACATTTCGGTAGACGTACAGG
GCAAGAACGATGGCGTTCATGTTTCTATCTTTACTGATTGATATTCTAAG
AGATTTAATCCACTTTCCCTGTCATATTTGATGCCTTGTAAAGCGGGTTC
AACCTGCACGCGAGGACAGTATCCAGAGCGTCTCTCCGTCCCCCTGGTAC
TCCCCTTTTCTTTTAACCAAAGCCTTTTCAAATTTCCAATTCCCAGTCAT
ACTTTATTTAGACCTTAATTGCTGTGAAGTGGGAGTCTGCTTTTCAAGCT
CCACAGCCGGGCGCTAAATTTCAAGAAAAGAAGCTTGCGTTCAAGAAGAT
CATGAGGCTGGCTGTAGGGCTCCTGTCGGTGGTTGTCGCCATGGCCAGCG
TTCTTAGCAGCGCCCATCCAATTTGTTGTACGGTGAATAAAGTGAGAAAA
TTACCTAGCACACCGGCTGTAACGCTCGCATCCTTGCAAGGGGGGCGAAT
CTTGAGACCAGACAGAAGGAGCCATCGACACATGCCATGGTCCGCGCCGT
ACGCGCCTCGTGGCATGCTGAGCAGAAGGGCCATGGCCAGTATTCCGAGC
CCTTTGGGGCTTCTCAAAGCATTTGGTAAAGCCTACAGCAACTGGATGAT
GGAGCAACCGATCCGTGCGAATCTGATTTCCGGGATATTGATGGTGGCAG
TGGGCGACGGGATCAGTCAAGCGATCGAAGTGGATGCGAAGACGGGCCAA
AAGAAGTGCACGTCTTGGCGGGACCTCTCCTTGCGCCGTTTAGCTAATGC
AGGATTTGCAGGTGCGGTATTCAACGGTGTTTTACTGCCGCAATGGTACC
TATTGCTGCATAAACTCTCTCCAGGAGCGGAGACGCCAAAGACGATCGCG
GCGAAGATTCTCGGCAATTGCGTGGCGTGGGGCTGTGTGGGGAACGCTGC
TATCATGGCCATGCGAAGAGTGCTCGACGGGGAGAGCTGGCATGACGCTG
AACAGGCCGTGCGGAGAGATCTCTGGGGAGTGATGATGAATGACTACAAA
ATATGGCCTTTATACGACGTGCTCTGCTTCACCTGCATCCCCCGGCATTT
GCACGGGCTGTCCACAGGCACGTTGGGGATCGTGTGGGCGACCTACTTGT
CCTACGTGACCCATACGGAGGGGCACTGATGCCGTAGGGTGGGGGCAGCG
AGAATGCAGGCCCCTGGGGGTTCATGGCAAGGGAGGGGGCGGAGAGTGTC
TGGCTCCGAGGGAGAGGTAAGGCGGCACCCGCCTCCGTGAAGGGGGCCAG
GACAAGAGGAAGACCAGCCTGTGGTCGACACGACCTTCCATCAAGACAGG
GCGGATGGCTTTTCAAATGTTCAAAATATGTGGAGTCTTCCTGCAGGCAT
GCTAAAAGAGGGTCAGAGCATGTCTGTCATCTGCAGCAACACACGGTGGA
ACAGTTTGACGAAGAAACATGACCACCACATCGTAGTAATCCA back to topCoding sequence (CDS) from alignment at CM002459.1:181339..182831- >rna2357 ID=rna2357|Name=rna2357|organism=Nannochloropsis gaditana|type=CDS|length=828bp|location=Sequence derived from alignment at CM002459.1:181339..182831- (Nannochloropsis gaditana)
ATGAGGCTGGCTGTAGGGCTCCTGTCGGTGGTTGTCGCCATGGCCAGCGT
TCTTAGCAGCGCCCATCCAATTTGTTGTACGGTGAATAAAGTGAGAAAAT
TACCTAGCACACCGGCTGTAACGCTCGCATCCTTGCAAGGGGGGCGAATC
TTGAGACCAGACAGAAGGAGCCATCGACACATGCCATGGTCCGCGCCGTA
CGCGCCTCGTGGCATGCTGAGCAGAAGGGCCATGGCCAGTATTCCGAGCC
CTTTGGGGCTTCTCAAAGCATTTGGTAAAGCCTACAGCAACTGGATGATG
GAGCAACCGATCCGTGCGAATCTGATTTCCGGGATATTGATGGTGGCAGT
GGGCGACGGGATCAGTCAAGCGATCGAAGTGGATGCGAAGACGGGCCAAA
AGAAGTGCACGTCTTGGCGGGACCTCTCCTTGCGCCGTTTAGCTAATGCA
GGATTTGCAGGTGCGGTATTCAACGGTGTTTTACTGCCGCAATGGTACCT
ATTGCTGCATAAACTCTCTCCAGGAGCGGAGACGCCAAAGACGATCGCGG
CGAAGATTCTCGGCAATTGCGTGGCGTGGGGCTGTGTGGGGAACGCTGCT
ATCATGGCCATGCGAAGAGTGCTCGACGGGGAGAGCTGGCATGACGCTGA
ACAGGCCGTGCGGAGAGATCTCTGGGGAGTGATGATGAATGACTACAAAA
TATGGCCTTTATACGACGTGCTCTGCTTCACCTGCATCCCCCGGCATTTG
CACGGGCTGTCCACAGGCACGTTGGGGATCGTGTGGGCGACCTACTTGTC
CTACGTGACCCATACGGAGGGGCACTGA back to top
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