EWM28334.1, cds2349 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|585110683|gb|EWM28334.1| (mpv17-like protein [Nannochloropsis gaditana]) HSP 1 Score: 563.148 bits (1450), Expect = 0.000e+0 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0 Query: 1 MRLAVGLLSVVVAMASVLSSAHPICCTVNKVRKLPSTPAVTLASLQGGRILRPDRRSHRHMPWSAPYAPRGMLSRRAMASIPSPLGLLKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTEGH 275 MRLAVGLLSVVVAMASVLSSAHPICCTVNKVRKLPSTPAVTLASLQGGRILRPDRRSHRHMPWSAPYAPRGMLSRRAMASIPSPLGLLKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTEGH Sbjct: 1 MRLAVGLLSVVVAMASVLSSAHPICCTVNKVRKLPSTPAVTLASLQGGRILRPDRRSHRHMPWSAPYAPRGMLSRRAMASIPSPLGLLKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTEGH 275
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|551658374|ref|XP_005831957.1| (hypothetical protein GUITHDRAFT_109023 [Guillardia theta CCMP2712] >gi|428176091|gb|EKX44977.1| hypothetical protein GUITHDRAFT_109023 [Guillardia theta CCMP2712]) HSP 1 Score: 96.2857 bits (238), Expect = 1.890e-20 Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 0 Query: 102 QPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHT 272 P+ + + G + +GD SQ IE + + +S R+A A G +NG+LLP +Y + + P + P + K+L + WG GN +++A+RR L+G ++ + + +W V +D+ +W Y+ LC+ IPR LST + +W+TY+S+++ + Sbjct: 52 SPLATHCLQGAGIAGLGDLCSQFIEKEKR-----------VSSGRIARASATGVFYNGLLLPYYYDAIQGVFP-SRKPVFVLIKVLIDSFLWGFFGNFSLVAVRRYLEGSPAVESVRYAQSVIWPVFKSDFTVWTTYNALCYGAIPREYQPLSTAVVSAMWSTYISFISTS 210
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|985386624|ref|XP_015370682.1| (PREDICTED: mpv17-like protein 2 [Diuraphis noxia]) HSP 1 Score: 81.6481 bits (200), Expect = 2.553e-15 Identity = 52/183 (28.42%), Postives = 82/183 (44.81%), Query Frame = 0 Query: 88 LKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVT 270 + +F K Y + PIR NL+ ++ GD I+Q++ K + W LR + AV G L WY L +L P +A KIL + + + N ++M M RV G+ W ++ + + VM Y IWP FT +P+ L+ + + W TYLSY++ Sbjct: 1 MSSFIKWYRFYSHTYPIRTNLVQTGVLFGAGDLIAQSVVEKRKPDE---IDW----LRTVRYTSIGCAV--GPTLTMWYKTLDRLGTKITIP-IVARKILVDQLVASPIINGSVMIMSRVFSGDEWPQIQKKLENNYVKVMFTSYLIWPTVQTFNFTIVPQQYRVLTVQIVSLAWNTYLSYIS 173
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|1028682229|ref|XP_016657020.1| (PREDICTED: protein Mpv17-like [Acyrthosiphon pisum]) HSP 1 Score: 79.337 bits (194), Expect = 1.939e-14 Identity = 55/186 (29.57%), Postives = 80/186 (43.01%), Query Frame = 0 Query: 90 AFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTEGH 275 AF K Y PIR NL+ M +GD I+Q+ K + W L + R A+ G A G L WY L +L P I KI + + + N A++ M RV +G+ W + + D VM+N Y IWP F +P+ L+ + + W YLS+V+ G Sbjct: 2 AFFKWYRYCSHTYPIRTNLVQTGFMFGLGDLIAQSAVEKCKPDE---IDW--LRMVRFASIGCAV----GPTLSMWYKSLDRLGTKNTIP-IITKKISVDQLIASPIINGAVLIMSRVFNGDKWPQIQNKLEEDFVKVMLNSYLIWPAVQTFNFIIVPQQYRVLAVQVVSLAWNIYLSFVSAGGGK 177
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|641658786|ref|XP_008180838.1| (PREDICTED: mpv17-like protein 2 [Acyrthosiphon pisum] >gi|1028691666|ref|XP_016658124.1| PREDICTED: mpv17-like protein 2 [Acyrthosiphon pisum]) HSP 1 Score: 78.9518 bits (193), Expect = 2.433e-14 Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 0 Query: 88 LKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVT 270 + +F K Y + PIR NL+ L+ GD ++Q+ K + W LR + A AV G L WY L +L P +A KIL + + + N A+M M RV G+ W + + + VM+ Y IWP FT +P+ L+ + + W TYLS+++ Sbjct: 1 MASFFKWYRFYSHTYPIRTNLVQTGLLFGFGDLMAQSAVEKRKPDE---IDW----LRTVRYASIGCAV--GPTLTMWYKTLDRLGTKNTIP-IVAKKILVDQMIASPIINGAVMIMSRVFSGDKWPQIQNKLEDNYVKVMLTSYLIWPAVQTFNFTIVPQQYRVLTVQIVSLAWNTYLSFMS 173
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|328720698|ref|XP_003247108.1| (PREDICTED: mpv17-like protein 2 [Acyrthosiphon pisum]) HSP 1 Score: 78.1814 bits (191), Expect = 5.257e-14 Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 0 Query: 103 PIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVT 270 PIR NLI +M +GD I+Q+ + + + W LR + A A+ G L WY L +L P + KIL + + + A+IM M RV G+ W ++ + + V+ Y IWP L FT IP+H L+ + + W TYLS+++ Sbjct: 16 PIRTNLIQTGIMFGLGDLIAQS---AVERRKPEDIDW----LRTVRYASIGCAL--GPSLTMWYRTLDRLGTEITVP-IVTKKILVDQLVASPIITASIMTMSRVFSGDEWPQIQKKLEDNYVKVLSTSYTIWPAVQALNFTIIPQHYRVLTVQIVSLAWNTYLSFMS 173
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|567217344|ref|XP_006412301.1| (hypothetical protein EUTSA_v10025993mg [Eutrema salsugineum] >gi|557113471|gb|ESQ53754.1| hypothetical protein EUTSA_v10025993mg [Eutrema salsugineum]) HSP 1 Score: 78.5666 bits (192), Expect = 1.704e-13 Identity = 61/232 (26.29%), Postives = 95/232 (40.95%), Query Frame = 0 Query: 50 ILRPDRRSHRHMPWSAP---YAPRGMLSRRAMASIPSPLGLLKAFGKA-----YSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTE 273 I+R R + H PW A ++P ++S +S S +F K Y + +P+ I+ L+ D SQ I D S L R A G + G L W+ L+ +L P +T T +G V +G V N ++ L GE+ + ++RDL M+N WPL D + F P HL L + + +W Y++Y+ E Sbjct: 38 IVRLQSRPYFHAPWKAKETGFSPSSLISGFCSSSSASSTASTASFAKVGFIGWYLGMVKSRPVLTKSITSSLIYIAADLSSQTIPQD---------SVESYDLVRTARMAGYGLLILGPTLHYWFNLMSRLFPKRDTITTFKKMAMGQTV-YGPVMNVVFFSLNAALQGENGSEIVARLKRDLLPTMLNGAMYWPLCDFITFKFCPVHLQPLVSNSFSYLWTIYITYMASRE 259
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|1214678883|gb|OWY98849.1| (hypothetical protein PHMEG_00030273 [Phytophthora megakarya]) HSP 1 Score: 77.0258 bits (188), Expect = 2.922e-13 Identity = 45/191 (23.56%), Postives = 89/191 (46.60%), Query Frame = 0 Query: 87 LLKAFGKAYSNWMMEQPIRANLISGILMVAVGDGISQAIE--VDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTEGH 275 +++ G+ Y W+ E P+ ++ + VGD I+Q IE D G++ + + S R G +F ++ W+ L+ + PG IA K++ + + + A + + ++GE+ DA + + L ++ DY +WP + + F +P H T + ++W+T+LS + EG Sbjct: 1 MVRRLGRFYHYWLHEAPLLTKAVTAATLFGVGDRIAQRIEGEDDDSRGEESHSGYVSPSTARTLRMMMWGGLFAAPIMHSWFYLVDRAIPGTGR-LVIAKKVVADMMVIAPGTSLAFFTVTKSMEGETVSDAFEIAKLKLPPTILADYMLWPAANTIIFGFVPFHYRTPLTHCVSLLWSTFLSGMASHEGE 190
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|817205294|ref|XP_012278558.1| (PREDICTED: protein Mpv17 isoform X1 [Orussus abietinus]) HSP 1 Score: 76.2554 bits (186), Expect = 2.989e-13 Identity = 44/182 (24.18%), Postives = 87/182 (47.80%), Query Frame = 0 Query: 92 GKAYSNWMMEQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTHTE 273 G+ Y + + P+R + +++A GD I+Q V+ + ++D+ L R A G G G + WY +L K G++ I K++ + + + A ++ L G + ++ +R + +++N+YK+WP+ ++ F+ +P L + I W TY+SY TH + Sbjct: 13 GRTYQRLLTKYPLRMQAVQTGILMATGDQIAQVF-VERR-------EYKDIDLVRTAQFGGLGFFLMGPAIRTWYGILDK-RIGSKGKTVILKKVVCDQLFFAPALIAVLLNSIGFLRGNNLEQNKEKLRNEYKDILINNYKLWPMVQIVNFSLVPLEYQVLVVQIVAIFWNTYVSYRTHRD 185
BLAST of EWM28334.1 vs. NCBI_GenBank
Match: gi|460384806|ref|XP_004238099.1| (PREDICTED: protein SYM1-like [Solanum lycopersicum]) HSP 1 Score: 77.0258 bits (188), Expect = 5.118e-13 Identity = 51/171 (29.82%), Postives = 77/171 (45.03%), Query Frame = 0 Query: 101 EQPIRANLISGILMVAVGDGISQAIEVDAKTGQKKCTSWRDLSLRRLANAGFAGAVFNGVLLPQWYLLLHKLSPGAETPKTIAAKILGNCVAWGCVGNAAIMAMRRVLDGESWHDAEQAVRRDLWGVMMNDYKIWPLYDVLCFTCIPRHLHGLSTGTLGIVWATYLSYVTH 271 +PI IS ++ A D SQ I + D+ +R L AGFA + G QW+ + ++ P + T+ +LGN A+G V N+ + L GE+ + ++RDL M N WPL D L + +P HL L + VW YL+YV + Sbjct: 93 SRPIITKSISSAVIFAAADITSQMIAMTPSDS-------LDI-IRTLRMAGFALMIL-GTAQHQWFNFMGRVLPKRDVVSTLKKLLLGN-FAYGPVINSVFFSFNAALQGENGEEIVARLKRDLIPTMTNGLMYWPLCDFLTYKVVPVHLQPLVNSSFSYVWTIYLTYVAN 253 The following BLAST results are available for this feature:
BLAST of EWM28334.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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