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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100109g8.6587.mrna |
| Orig protein id | gnl|cribi|Naga_100109g8.6587 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:179514..181347 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2356 ID=rna2356|Name=rna2356|organism=Nannochloropsis gaditana|type=mRNA|length=1679bp
AATGTTTGAGTTGCTCAATCTCTTTTTCAGTCCAGGGGCCAGAAACGATT
GGGATATCTGCACTCGATGATCGACGACGTACCGCATTGCATCCTCAAGT
GCAACATATTGACTTGACGTGTTCTTTTTTTATTTATCATGGCTTCAACA
GGGATGGTCTGTCGTCCGCAAATGAGACAAGCAGGCAGACAACAAGTTGG
ACGTCGGTGGTTGGGTTGGATTTTTATCTGCCTCGCTGCTGGACCCAGCA
CCACAGCTTTCGTGAATTTTATCTCTGGACCCCCAGCATTATCAGCAGAC
GCTACGGGCGCCTGGCAACCATCCCACACTCACCCCTACCGAAACAAGCC
GCGCCTATTTACCGGGACCGATGGGGGTACTTCGGCATCCTTATCTTCGA
GCGACCTCCCATCATCTCTGGGTGAAACACAGTTGGGCCCAAGCGGGAAT
GCCATGACGGATACTTTGGCGCGAAAAGCCAAAGAAAAAGAAATCGCTGC
GTTCAAAGCAGCCCTTCCCCGTGCCCATCCCATCTTCACCATGCTGGAGG
ACCTCAGCTTCCCTCCGTCCTTGGCCAACCGGAGTGATGCCTTGTACCAA
AATCTTCGTCACCGTCATGGGAACACTTTAACGGTCGTGGCGGAGTACTG
GCGGAAGGCGCCCTTTGCGTTCCTGGGTTCGGTCTTGGAACCCAAGGAAT
ACAGCGAAATCTACCGAGAGGCAGGGGCGAGCGCGATTGCCGTGAACGTG
GACTCTGTTGGAGGGGGATGTGCACACGAAGACATCGCCGAGATGGTGGC
GGAGCAACAAGCCGCCATCTTGGAGGACGTGACCGCCCCCGTGCCCATCG
TCGCCATGGACGTGGTCGTGGACCCCGTGCAAATTTCGCGGGCAAAGCTG
GCCGGAGCGGCAGGCATCACCCTCCGCTTCTCCCTCACACCCCCCGAGGT
CACCCTGTCCCTGATTCAGACCGCCTTGGCGTTAGGCATGGAGCCCATGG
TCTTCGTCAGGAATTCGACCGAAGCAGCGGCGGCGGTAGGGGCGGGGGCC
CGCGTCGTCTATCTGTATGGGTGTTCCCGCGCACAGGCCGTTGAGATGCG
CCAGGATTTGGATCAAGACGGTGTGATGATTGGCTTTGACCTGCGTCGAC
CCCGCGAATTTCAGTACGGGTTGAACGAGGTAGAAGATGCCTGGATCCTC
CGGGACGCGGGTTTTCACAGCGTTTATGTGAGCAATTTGTTGTTCCAAAC
GCCGTTGGATGATGTGCTGGGGCCTAGCTCGGTCATCAAGGCTTTGCGTG
CCAAAGCCTGCGTTTTCCTGGTCGACCCCTTGGACTGGATCGAGAAGTCC
GTGATGGAAGGCTCGAAAGAAACCTTGGGGGAGCTCTTGGCGTAGGCCGG
AAGGGCCTCTTTCGTATTGGGAGGTTTGTGTGTGAGTCTATGTGCTGGGT
AGTGGTGGGTGTCTGGCGGCGATAGTAAAGGCGAACAGGCGTATGGGACG
GGTCGAACGAGAAGGGTCTCCTCCCTTCTTACCGCGTGTACATAAGGAAC
TGCGAATGGGTAGCTGGAGACCTTTGACGCTCAAGTTCTGGTAAAATATA
AATGACTGCTTTTATAGTTTTTCCTTCTCAAAAGTGCTACAGACCGGTCA
GGTCACAACCAAGCATGGCTTCATTTAAA back to topprotein sequence of rna2356 >rna2356-protein ID=rna2356-protein|Name=rna2356|organism=Nannochloropsis gaditana|type=polypeptide|length=436bp
MTLPTAALQSRFVGSSTNLGALLVPLPYLQEDQEHDSPQEYLADTEKCLE
VALQTLKSEGAVILQDCLSPSSLEKCRGVIEIVVDALLSAVATNSLIAPI
NKVQSLPFAAQYCTRTAGPGMNGHLDPGISRHDSIPSGSDTVSCNATGFN
SSRELPHDREIKALYSAFDDAKVVSADVRRHLGITRIAKIGRGKKNVHFD
PYYTPLSTTKNKVKKTYAPDTETLSSKPMDEHGILENTQPFNSKSPSRAL
CSHPTAAAATPEASSPPYVAAPFGNSLHPHAAMEALAESAGVARLVRAYC
GDDVTLAETGISITRPEGEGLEWHADGREGECTVIMSLEDIRQTMGRLGL
IPRSHLMLDREASEDFDQDLMDLVGREGGRDGAVWYAYRKGQPIVFDART
VHTAEGSVERGRGQEKGRVVAREECRVILWWIYNGQ back to topmRNA from alignment at CM002459.1:179514..181347+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2356 ID=rna2356|Name=rna2356|organism=Nannochloropsis gaditana|type=mRNA|length=1834bp|location=Sequence derived from alignment at CM002459.1:179514..181347+ (Nannochloropsis gaditana)
ATGATAGTGCTATGGAGAAAGTCATGGTGAATTGTCCTGAGGATTTTTGA
AGCACTGCCCGCCACAAGTGTGAGCGAGCCTTGCGCGCGGCTCTGGCATT
CGTCAAATGGCGCCGTGCACACTTTTGCAAAACTCTTGTATTTTTTGTAC
ATTGTCAAGTTATTCTGGCTCAGGCGTGCCAACAACGGTTTTTTACCTCA
CGCGTGCACTGACTATCGCGGCCTAGTGCCCTCCGGGGACACACACTTCG
AGCCCAGATTGGAGGCATCAAAATTAACCTCCTGCATCCTTGCGACGCTA
TTCTCACTTCGCTTCTCGACATATCTACGCTGCAATTCGACATAAACTTT
TTATGAATAGGTTGCTTTTTCATGTTTAAGTATAAGGGGAAATTTAAAGT
TGTACTGTAGATGTCATGACCCTGCCGACAGCTGCGCTGCAATCCCGCTT
TGTTGGGTCCTCGACAAATTTGGGCGCATTGCTGGTTCCATTACCGTACT
TACAGGAAGACCAAGAACATGATTCGCCCCAAGAATACCTTGCAGACACA
GAAAAATGCTTAGAAGTCGCTCTTCAAACCCTCAAAAGTGAGGGCGCGGT
CATATTACAGGactgcctctccccctccagttTAGAAAAGTGTCGCGGTG
TTATTGAAATTGTGGTGgatgccctcctctctgccgtGGCTACAAATTCT
CTTATCGCCCCTATCAACAAAGTCCAGTCCCTCCCATTTGCCGCCCAATA
TTGCACGCGGACAGCAGGGCCTGGCATGAATGGACATTTGGACCCTGGAA
TTTCACGCCACGATAGCATTCCCAGCGGGTCTGATACGGTCTCTTGCAAC
GCCACGGGTTTCAATTCGTCGCGCGAACTTCCTCATGACCGCGAAATCAA
AGCTCTATACTCGGCATTTGACGACGCCAAAGTTGTAAGCGCAGATGTGC
GGCGGCATCTGGGCATCACACGCATCGCCAAAAtcggaagggggaagaag
aacgtCCACTTTGACCCGTACTACACCCCTTTGTCCACAACAAAGAACAA
GGTTAAGAAGACATATGCGCCGGACACAGAAACCTTGTCATCTAAGCCCA
TGGATGAACATGGTATTTTGGAAAACACACAGCCTTTCAACTCCAAGTCG
CCCTCCAGAGCCCTCTGTAGCCATCCAACCGCCGCGGCAGCAACCCCAGA
GGCGTCTAGCCCACCCTATGTCGCTGCCCCATTTGGCAATAGCTTGCATC
CGCATGCGGCGATGGAAGCTTTGGCCGAGAGTGCAGGAGTGGCTCGGCTT
GTGCGGGCGTATTGTGGGGATGACGTCACACTCGCCGAGACGGGTATCTC
GATCACCCgcccggagggagagggacttGAATGGCATGCAGACGGTAGGG
AAGGCGAGTGTACGGTGATTATGAGCTTGGAAGATATAAGGCAAACAATG
GGCAGGCTGGGGTTGATCCCACGGAGCCATTTGATGCTGGACCGGGAGGC
CAGCGAGGATTTTGACCAAGATTTGATGGATCtcgtagggagggagggag
ggagggacggtgcCGTGTGGTACGCGTACCGGAAGGGGCAACCGATTGTA
TTTGATGCCCGGACTGTGCACACGGCGGAGGGGAGTGtagaaagggggag
aggacaggaaaaaggaagggtaGTGGCTCGGGAGGAATGTCGAGTGATCT
TGTGGTGGATTTACAACGGACAGTGAGTGGAGGGATGCTCCGTGCTATAA
AGTATCCCCCCCACAAACataaaaaaatcaaaaaaatctcgaggaggagc
gaaagcTCATGCAATCCCTCAACCGTGGATTACT back to topCoding sequence (CDS) from alignment at CM002459.1:179514..181347+ >rna2356 ID=rna2356|Name=rna2356|organism=Nannochloropsis gaditana|type=CDS|length=1311bp|location=Sequence derived from alignment at CM002459.1:179514..181347+ (Nannochloropsis gaditana)
ATGACCCTGCCGACAGCTGCGCTGCAATCCCGCTTTGTTGGGTCCTCGAC
AAATTTGGGCGCATTGCTGGTTCCATTACCGTACTTACAGGAAGACCAAG
AACATGATTCGCCCCAAGAATACCTTGCAGACACAGAAAAATGCTTAGAA
GTCGCTCTTCAAACCCTCAAAAGTGAGGGCGCGGTCATATTACAGGactg
cctctccccctccagttTAGAAAAGTGTCGCGGTGTTATTGAAATTGTGG
TGgatgccctcctctctgccgtGGCTACAAATTCTCTTATCGCCCCTATC
AACAAAGTCCAGTCCCTCCCATTTGCCGCCCAATATTGCACGCGGACAGC
AGGGCCTGGCATGAATGGACATTTGGACCCTGGAATTTCACGCCACGATA
GCATTCCCAGCGGGTCTGATACGGTCTCTTGCAACGCCACGGGTTTCAAT
TCGTCGCGCGAACTTCCTCATGACCGCGAAATCAAAGCTCTATACTCGGC
ATTTGACGACGCCAAAGTTGTAAGCGCAGATGTGCGGCGGCATCTGGGCA
TCACACGCATCGCCAAAAtcggaagggggaagaagaacgtCCACTTTGAC
CCGTACTACACCCCTTTGTCCACAACAAAGAACAAGGTTAAGAAGACATA
TGCGCCGGACACAGAAACCTTGTCATCTAAGCCCATGGATGAACATGGTA
TTTTGGAAAACACACAGCCTTTCAACTCCAAGTCGCCCTCCAGAGCCCTC
TGTAGCCATCCAACCGCCGCGGCAGCAACCCCAGAGGCGTCTAGCCCACC
CTATGTCGCTGCCCCATTTGGCAATAGCTTGCATCCGCATGCGGCGATGG
AAGCTTTGGCCGAGAGTGCAGGAGTGGCTCGGCTTGTGCGGGCGTATTGT
GGGGATGACGTCACACTCGCCGAGACGGGTATCTCGATCACCCgcccgga
gggagagggacttGAATGGCATGCAGACGGTAGGGAAGGCGAGTGTACGG
TGATTATGAGCTTGGAAGATATAAGGCAAACAATGGGCAGGCTGGGGTTG
ATCCCACGGAGCCATTTGATGCTGGACCGGGAGGCCAGCGAGGATTTTGA
CCAAGATTTGATGGATCtcgtagggagggagggagggagggacggtgcCG
TGTGGTACGCGTACCGGAAGGGGCAACCGATTGTATTTGATGCCCGGACT
GTGCACACGGCGGAGGGGAGTGtagaaagggggagaggacaggaaaaagg
aagggtaGTGGCTCGGGAGGAATGTCGAGTGATCTTGTGGTGGATTTACA
ACGGACAGTGA back to top
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