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Properties
| Property Name | Value |
|---|
| Product | MtN3-like protein |
| Orig transcript id | gnl|cribi|Naga_100109g11.6601.mrna |
| Orig protein id | gnl|cribi|Naga_100109g11.6601 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:175365..177007 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2353 ID=rna2353|Name=rna2353|organism=Nannochloropsis gaditana|type=mRNA|length=1334bp
CGTGCCCTTTGATCACGTTGACACATCGAAGGCTGCCCAAGTAGACTTGG
CATCACACGCATTACTATTCTTGAGTCAAATTCAAGCTCACCTGTCGCTC
GCAATCTTTTTTTCCTTCCTTCCCACCCCACCCAAATGGGAAAACCCAAG
GGCCCTCTGTCAACATGGGCAGCCTTGGCATCCTGCAGACCTCGGCAAGC
CTCACAGCAGTGATTTTAAATATCTGTCCTATTTTTGATGAAATCCCCGC
AATCAAACGGAGTCGATCCACGGGCGATCGCTCCCCTCTCCTCTTTGTGG
CCATTTGGACAAACGCATGCCTATGGATGTTCTACGGCGTCTTCATCGAA
GCTATTCACCCCATAGCCACCACAAATTTCACCGGATTTCTTTCAGGGTC
TTATTTCTTGCTCACCTTCTACGCCTACGCTTCCCCCGTGGCCAAGACGC
GCTTCGCGCAATATTTCGTGCTTGCCCTCTCTTTTGTCCTGAGCACGGCG
ACGTACTGCTTCTTCTTCCCTTCCCCGGATACAAGCAGGACCCAGGCCCA
TCTGGGGGCGCTTTGCACCCTTGTCACCATCGCTGTGTACGCCGCCCCCC
TCTCCACCGTCCTGCGGGCCTTGCGCCTGCGCTCGCCCAAGCCCATCTCC
CTCTTTTTCGCCCTGGTCGGCACCCTGAACAGCGTTTTGTGGGGGGCCTA
CGGCATTTTGACGGCGGATGCCTGGGTCTACATCCCCAGCGTTCTCGGTG
TCTTCATGTGTCTGACGCAGGCGGCTGTCTTCTTCTGGTTCGCCGTGGGA
AGGGGGGGATTGGAGGGAGGGAAGGAAAGTCGAGGGGAAGGGTTTGGGGG
GAAAGCCCTGTTCGACTTCTTGTCATTACAGGGAGACGGGGGCAAGGAGA
TGCAGGCGGCCCTTTTGTGAAACGAGGGGGGGGTCGGAGTGGCCAATGCG
GACGCGGTGGGGGAGGAGCAGGCGCGGTGCTTGACATGTTGCTCCCGACC
GTTGAAACCGATAGATATTGAAATTTAAACATTCAAACGCGCCGGCAAGG
CGTTCGAGAAACGTGGCTACCTGGCCCTTGTCGATGGCGGTCTTTGTGCA
CGGAAGTGGGGCGATTCGGTCGACCGAAACGAAGATGCGACGGGAGATGG
ATCGCCTGGGAGCGGGAGAGGGGGATGCCAGCTTTCCTTGGCTTTTGTGG
AGAAATGTGTATGAATCAAATGGAAAATATCGTGTCGGAAAAGACAAGCT
ATGAACGAATGACAGACACGCATTTCCAAATATAATAACGTGATCGAGGG
GGGGAAAGAAATCAAACAATGATAGATATATATC back to topprotein sequence of rna2353 >rna2353-protein ID=rna2353-protein|Name=rna2353|organism=Nannochloropsis gaditana|type=polypeptide|length=249bp
MLASFMSGNACVSHSPPHSSLFYSPTAIKRSRSTGDRSPLLFVAIWTNAC
LWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFV
LALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRA
LRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQ
AAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL back to topmRNA from alignment at CM002459.1:175365..177007- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2353 ID=rna2353|Name=rna2353|organism=Nannochloropsis gaditana|type=mRNA|length=1643bp|location=Sequence derived from alignment at CM002459.1:175365..177007- (Nannochloropsis gaditana)
CATCACACGCATTACTATTCTTGAGTCAAATTCAAGCTCACCTGTCGCTC
GCAATCTTTTTTTCCTTCCTTCCCACCCCACCCAAATGGGAAAACCCAAG
GGCCCTCTGTCAACATGGGCAGCCTTGGCATCCTGCAGACCTCGGCAAGC
CTCACAGCAGTGATTTTAAATATCTGTCCTATTTTTGATGAAATCCCCGG
TAAGTGTTTATGTCCAGTCGAGCGGCTTTTGTCGCGATGGAAGAGTACTT
CTCGGTGGGAAAATAGGCCCATACGTGGGTACTTCCCCAGAACTCCCCTT
TACCTCCAAGCAAAACTGTCTTTTTGTTATCAAAACAAAAGGCCTCGGTC
ATTCAGCACCCTTGTCTCCACTACATTGATCGAGAGTGGTTTCGGATGTG
AATTACGTCGGTAGCCAGCTTGTCTACCTGAAGGTTGATGGCTGATCGTC
AAGTCTCCCTCATTTGATCGCAATTTCCTATGCTGGCGTCCTTCATGTCA
GGGAATGCTTGTGTCTCGCATTCGCCTCCTCACTCCTCCTTATTCTACTC
CCCGACAGCAATCAAACGGAGTCGATCCACGGGCGATCGCTCCCCTCTCC
TCTTTGTGGCCATTTGGACAAACGCATGCCTATGGATGTTCTACGGCGTC
TTCATCGAAGCTATTCACCCCATAGCCACCACAAATTTCACCGGATTTCT
TTCAGGGTCTTATTTCTTGCTCACCTTCTACGCCTACGCTTCCCCCGTGG
CCAAGACGCGCTTCGCGCAATATTTCGTGCTTGCCCTCTCTTTTGTCCTG
AGCACGGCGACGTACTGCTTCTTCTTCCCTTCCCCGGATACAAGCAGGAC
CCAGGCCCATCTGGGGGCGCTTTGCACCCTTGTCACCATCGCTGTGTACG
CCGCCCCCCTCTCCACCGTCCTGCGGGCCTTGCGCCTGCGCTCGCCCAAG
CCCATCTCCCTCTTTTTCGCCCTGGTCGGCACCCTGAACAGCGTTTTGTG
GGGGGCCTACGGCATTTTGACGGCGGATGCCTGGGTCTACATCCCCAGCG
TTCTCGGTGTCTTCATGTGTCTGACGCAGGCGGCTGTCTTCTTCTGGTTC
GCCGTGGGAAGGGGGGGATTGGAGGGAGGGAAGGAAAGTCGAGGGGAAGG
GTTTGGGGGGAAAGCCCTGTTCGACTTCTTGTCATTACAGGGAGACGGGG
GCAAGGAGATGCAGGCGGCCCTTTTGTGAAACGAGGGGGGGGTCGGAGTG
GCCAATGCGGACGCGGTGGGGGAGGAGCAGGCGCGGTGCTTGACATGTTG
CTCCCGACCGTTGAAACCGATAGATATTGAAATTTAAACATTCAAACGCG
CCGGCAAGGCGTTCGAGAAACGTGGCTACCTGGCCCTTGTCGATGGCGGT
CTTTGTGCACGGAAGTGGGGCGATTCGGTCGACCGAAACGAAGATGCGAC
GGGAGATGGATCGCCTGGGAGCGGGAGAGGGGGATGCCAGCTTTCCTTGG
CTTTTGTGGAGAAATGTGTATGAATCAAATGGAAAATATCGTGTCGGAAA
AGACAAGCTATGAACGAATGACAGACACGCATTTCCAAATATAATAACGT
GATCGAGGGGGGGAAAGAAATCAAACAATGATAGATATATATC back to topCoding sequence (CDS) from alignment at CM002459.1:175365..177007- >rna2353 ID=rna2353|Name=rna2353|organism=Nannochloropsis gaditana|type=CDS|length=750bp|location=Sequence derived from alignment at CM002459.1:175365..177007- (Nannochloropsis gaditana)
ATGCTGGCGTCCTTCATGTCAGGGAATGCTTGTGTCTCGCATTCGCCTCC
TCACTCCTCCTTATTCTACTCCCCGACAGCAATCAAACGGAGTCGATCCA
CGGGCGATCGCTCCCCTCTCCTCTTTGTGGCCATTTGGACAAACGCATGC
CTATGGATGTTCTACGGCGTCTTCATCGAAGCTATTCACCCCATAGCCAC
CACAAATTTCACCGGATTTCTTTCAGGGTCTTATTTCTTGCTCACCTTCT
ACGCCTACGCTTCCCCCGTGGCCAAGACGCGCTTCGCGCAATATTTCGTG
CTTGCCCTCTCTTTTGTCCTGAGCACGGCGACGTACTGCTTCTTCTTCCC
TTCCCCGGATACAAGCAGGACCCAGGCCCATCTGGGGGCGCTTTGCACCC
TTGTCACCATCGCTGTGTACGCCGCCCCCCTCTCCACCGTCCTGCGGGCC
TTGCGCCTGCGCTCGCCCAAGCCCATCTCCCTCTTTTTCGCCCTGGTCGG
CACCCTGAACAGCGTTTTGTGGGGGGCCTACGGCATTTTGACGGCGGATG
CCTGGGTCTACATCCCCAGCGTTCTCGGTGTCTTCATGTGTCTGACGCAG
GCGGCTGTCTTCTTCTGGTTCGCCGTGGGAAGGGGGGGATTGGAGGGAGG
GAAGGAAAGTCGAGGGGAAGGGTTTGGGGGGAAAGCCCTGTTCGACTTCT
TGTCATTACAGGGAGACGGGGGCAAGGAGATGCAGGCGGCCCTTTTGTGA back to top
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