EWM28333.1, cds2345 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|585110682|gb|EWM28333.1| (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 501.516 bits (1290), Expect = 1.686e-179 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MLASFMSGNACVSHSPPHSSLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 249 MLASFMSGNACVSHSPPHSSLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL Sbjct: 1 MLASFMSGNACVSHSPPHSSLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 249
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|585110681|gb|EWM28332.1| (MtN3-like protein [Nannochloropsis gaditana]) HSP 1 Score: 448.743 bits (1153), Expect = 1.692e-158 Identity = 224/229 (97.82%), Postives = 225/229 (98.25%), Query Frame = 0 Query: 21 LFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 249 +F AIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL Sbjct: 23 IFDEIPAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGDGGKEMQAALL 251
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|299470883|emb|CBN78832.1| (MtN3-like protein [Ectocarpus siliculosus]) HSP 1 Score: 105.531 bits (262), Expect = 4.096e-24 Identity = 66/205 (32.20%), Postives = 105/205 (51.22%), Query Frame = 0 Query: 19 SSLFYSP----TAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSF--VLSTATYCF--FFPSPDT---------------SRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQ 200 S LF +P ++RS+ G+RS FV +W ++ LW+ YG+FI I P TN G Y+ YA+A A + + Y + A +F + T+C F P P++ R Q LG + T Y APL+ +++ +R RS + +SL A+V + S LW +YG++ +A++Y+P+VLGV +TQ Sbjct: 14 SLLFVAPIHEFEEVRRSKHVGERSVFPFVCMWASSTLWLIYGLFIGDIVPTVVTNLLGLACSCYYC-AVYAWAVEPASRKSSTYNLFAATFLGICVVVTFCLGTFSPRPESWVSMQDADSTDSGGDERAQRFLGIAASAATAIQYGAPLAELVKVIRRRSTEGMSLALAVVSLVCSTLWMSYGVMLVNAFIYVPNVLGVCFSVTQ 217
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|570334858|gb|ETO82806.1| (hypothetical protein F444_03097 [Phytophthora parasitica P1976]) HSP 1 Score: 86.2705 bits (212), Expect = 2.326e-16 Identity = 65/224 (29.02%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 20 SLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 239 SLF +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ I +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 25 SLFPDWNRWRKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSIPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 241
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|952513707|gb|KRT80241.1| (hypothetical protein AMK59_8622 [Oryctes borbonicus]) HSP 1 Score: 83.9593 bits (206), Expect = 5.221e-16 Identity = 52/193 (26.94%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 28 IKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEA-----IHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLE 215 I R R TGD SP F++ + LW+ YG+ I ++ I +T F G++ + FY Y+ + ++ + F + +++T Y + S D + ++G LC ++T+ +AAPL++V+ L+ +S + L G + + W AYG+L D ++ IP+ LG + +Q +F + +E Sbjct: 32 IARKRGTGDMSPFPFISGHLSTSLWLRYGLLINDFSLIFVNTIGSTLFLGYV------VVFYYYS--IKRSMIVKQFTGCMLLLVTTVLYSVW--SEDVLMVRRNIGTLCCVITVVFFAAPLTSVIHVLKTKSTDSLPFPIILTGFIVTSQWYAYGVLLKDEFIQIPNFLGTVLTFSQLCLFCIYPSKNQDIE 214
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|675182701|ref|XP_008900235.1| (hypothetical protein PPTG_07713 [Phytophthora parasitica INRA-310] >gi|568100017|gb|ETN14723.1| hypothetical protein PPTG_07713 [Phytophthora parasitica INRA-310]) HSP 1 Score: 84.7297 bits (208), Expect = 6.423e-16 Identity = 64/224 (28.57%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 20 SLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 239 SLF +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ + +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 25 SLFPDWNRWRKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSMPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 241
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|1175866703|ref|XP_020587104.1| (bidirectional sugar transporter SWEET13-like [Phalaenopsis equestris]) HSP 1 Score: 84.7297 bits (208), Expect = 6.745e-16 Identity = 54/166 (32.53%), Postives = 85/166 (51.20%), Query Frame = 0 Query: 28 IKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSRTQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLG 193 I R +ST D L +V +A LWMFY + + T N G + + +++ F YAS A+ + L +LS C S D+ R Q LG +C + ++ V+AAPLS + +R +S + + +L TL++V W +GI T D +V +P+VLG Sbjct: 37 IYRRKSTEDFQSLPYVVALLSAMLWMFYAFIKSNAYLLVTINSFGCVIETTYIIIFLIYASTKARVHTIKMMALLNVGLLSFIVLCILLISNDSLRLQV-LGWICVIFSVTVFAAPLSIIREVIRSKSVEYMPFTLSLFLTLSAVAWFFFGIFTKDIYVALPNVLG 201
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|566031177|gb|ETI54088.1| (hypothetical protein F443_03057 [Phytophthora parasitica P1569] >gi|570958929|gb|ETP23908.1| hypothetical protein F441_03038 [Phytophthora parasitica CJ01A1] >gi|970661101|gb|KUF98599.1| N-terminal kinase protein [Phytophthora nicotianae]) HSP 1 Score: 84.7297 bits (208), Expect = 6.758e-16 Identity = 64/224 (28.57%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 20 SLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 239 SLF +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ + +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 25 SLFPDWNRWRKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSMPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 241
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|567968852|gb|ETK93969.1| (hypothetical protein L915_02922, partial [Phytophthora parasitica]) HSP 1 Score: 84.7297 bits (208), Expect = 8.086e-16 Identity = 64/224 (28.57%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 20 SLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 239 SLF +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ + +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 41 SLFPDWNRWRKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSMPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 257
BLAST of EWM28333.1 vs. NCBI_GenBank
Match: gi|570994894|gb|ETP51910.1| (hypothetical protein F442_03016, partial [Phytophthora parasitica P10297]) HSP 1 Score: 84.7297 bits (208), Expect = 8.677e-16 Identity = 64/224 (28.57%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 20 SLFYSPTAIKRSRSTGDRSPLLFVAIWTNACLWMFYGVFIEAIHPIATTNFTGFLSGSYFLLTFYAYASPVAKTRFAQYFVLALSFVLSTATYCFFFPSPDTSR----TQAHLGALCTLVTIAVYAAPLSTVLRALRLRSPKPISLFFALVGTLNSVLWGAYGILTADAWVYIPSVLGVFMCLTQAAVFFWFAVGRGGLEGGKESRGEGFGGKALFDFLSLQGD 239 SLF +++RST D S L V I+ N+ +FY I P+ T+ G + G + +FY +A+ + + F ++ S L+ Y F S T + T+ LG + T +YA+P++T++R +R ++ + +V LNS WG YG L + ++ +P+++GV + LTQ V F + R K+S + L D L + GD Sbjct: 41 SLFPDWNRWRKNRSTADMSVLPCVMIFGNSYGAVFYAYAISNYLPLFATSMLGVIVGVFMTYSFYIWATD--RREVVRIFAISASVFLAVTVYGFLALSGVTGQSNHSTETTLGFIMVGFTTLMYASPMATIIRVVRTKTATSMPFTMGVVNVLNSFCWGVYGELIRNNFLLVPNIIGVTLSLTQMLVTFIY---RSKEVNDKQSVAT--SSEDLVDILVVPGD 257 The following BLAST results are available for this feature:
BLAST of EWM28333.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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