rna2350, rna2350 (mRNA) Nannochloropsis gaditana

Overview
Namerna2350
Unique Namerna2350
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1191
Alignment locationCM002459.1:171046..173007 +

Link to JBrowse

Properties
Property NameValue
Productgtp-binding protein
Orig transcript idgnl|cribi|Naga_100109g13.6593.mrna
Orig protein idgnl|cribi|Naga_100109g13.6593
GeneMEngA
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:171046..173007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MEngAgene2246Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2350rna2350-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28325.1cds2342Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2350 ID=rna2350|Name=rna2350|organism=Nannochloropsis gaditana|type=mRNA|length=1191bp
ATGTTGTTCAATTACCACAGGCACACATCACATAGCTATCGCAATTGTAC
CGAGCCGTGCGGCCTGACGCTCATGACGCGTGTCTTTCAACGGGCCCTTA
GCACCCTTGTCGTTTTGTCCTCCTCGACTCCGGTCGCGTCGTTCTTGCAC
CACGGACCCGCCAGCCGCATGATGGGAAACAAAGGAGGTAGCCAGTCGCT
AGGGAGCGCCATTCGAAGGCTTCCACAGGTTATTTCGGCGGCCGCATTTT
GGTTGTCCCCGCCCGCGTCCTTCAGCTCGCAACGTCTCAGCAGCAGCAGC
AGCAGCAGCGCCGAAGGCACCAAGACGGAGGAAAAAGGCGGGGGTCATTC
TGTACCCGGTCAAGCCCCTGCAGAGCAAGACCCTGAACTTGTCCGCGTCC
AGACAATGCTGATGGAGCACCAGAAGACAGCCGCGCGTCTCACAGCCGCG
GAGGAGGCTCGCACGCTGGTTTACTACTCCACAGGGTTGGGGGTTTTGGG
CACGAATTCGCAAGCTTCCTCTCCCTTGGCCGGGTACCCGGCGTCAGCCA
TGGTCGGATTTGCAGTGGACGAAAAAGGCCGGCCCATATTCTCCTTCTCG
AGCATTTCCACCCACAAGCAGGACCTGCTGAAGGATCCGCGGGCCTCTTT
CACAGTGGCGAGCAAGGATTTCAAGGGATTGGACGATGGACGCGTCTCTT
TCGTGGGGGAAATCAAAAAAGTGCCCGAAGGGGAAGAAACGACGAAAGCG
CGGGAGACGTATCTAGCCAGGCATCCGGGGCACTTCTGGGTGGATTTCGG
AGATTTTGATTTCTTCCGTATGGATACCATGGCGGCAGTACGCTACAACG
GGGGCTTTGCACGCTTTGGGGCGCTGGAGCCGGCGGACTACTTGGATGCC
GCGCCCGACGCTTGTCAACCGTACGCAGCCGCAGTGATGAATCACATGAA
TGCTGACCACTCCGACGCGACGAAAGCGATGGTCCTTCACTACGTCGGCT
TGGAAGTTGATAAGGCCGAAATTGTGTCCTTGGATAGGTTGGGCATGATG
GTGAAAGTGGAGAGTAAATGGGGAGGAAGCAAAATCCGATTGCCTTTTAC
AAGGGAATGCACGGATCGAAAAGTGTGTAAGGAGATCATCGTCGAAATGA
CGCAAGCCTCAGCAGGAGCCTCCGCGGGGGCGAAGGTATGA
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protein sequence of rna2350

>rna2350-protein ID=rna2350-protein|Name=rna2350|organism=Nannochloropsis gaditana|type=polypeptide|length=653bp
MHTHVHASNDKTSTRPFRVALIGRPNVGKSTLFNRLTGTAKGRWTGGTAI
VTPIPGTTRDRKTGPCSYAGISMVVTDTGGLVEEDEVRIEDEAGDVEGEE
VEDMDPRGLVRERVRAQRKQIQELINAQVAQAVKESDAVLFLVDARAGVG
PGEAHVAGWLHKVGASGKTILVANKVEGGVSSDMQTAVYDAYAFGLGDPV
AISAAHNEGISELATLLVEKALSVGLQGANAPGIDAGRHHEKDAPGGCEG
EKEEVVTVAFVGLPNAGKSSLVNAALEHLPRAPPGPGASPDEDTDNVDST
SEEVEGRVPAALPWPRPLTASVPRMITSEVAGTTRDVVAVDYAYRGRRLR
LVDTAGIRKRGRQDHRNLLEQWSVAEAFRAVQFANVVVLVLDAQHLRLRR
QEQRVASRAFQEGRALVVVANKSDLLQTSPGLYAQNVRDQLHLLSPQLGS
LPVLATSALTRQGIGSILPAVLRAYRAWNTRVSTGLLNRWLLETQRLRAS
PLTATTRKVVKMKYISQIKTRPPTFALVTNRAGMEESYVKFLKNHLRDSF
GLHGMDVRLLLRCTGGENNPYAAKAAAEAAERKKAWMNRQKKKWAQESQD
VGSGKAKRDDVEERVEQERKKRRQLREMTKRSKVEARNKRRAYNTRVVGL
TRT
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mRNA from alignment at CM002459.1:171046..173007+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2350 ID=rna2350|Name=rna2350|organism=Nannochloropsis gaditana|type=mRNA|length=1962bp|location=Sequence derived from alignment at CM002459.1:171046..173007+ (Nannochloropsis gaditana)
ATGCACACGCACGTCCATGCCTCGAACGATAAGACTTCAACACGTCCGTT TCGAGTTGCCTTGATTGGGAGACCGAATGTGGGTAAATCCACGCTATTTA ATCGTCTCACGGGTACCGCCAAAGGGCGATGGACTGGAGGAACAGCCATT GTCACTCCCATTCCTGGCACAACACGGGATCGAAAAACGGGGCCGTGTTC CTATGCAGGAATTTCAATGGTGGTGACTGATACTGGAGGGTTggtagaag aggacgaggtaAGGATTGAGGATGAGGCCGGGGACGTTGAGGGTGAAGAA GTCGAGGACATGGACCCGCGCGGCCTGGTCAGAGAGAGGGTCCGAGCCCA ACGGAAGCAAATCCAGGAACTGATCAATGCCCAGGTAGCCCAGGCCGTGA AAGAGAGCGACGCGGTCCTTTTCCTGGTGGACGCGCGTGCGGGGGTAGGT CCCGGCGAGGCTCACGTGGCCGGGTGGCTGCACAAGGTGGGGGCATCGGG AAAGACCATCCTGGTGGCAAATaaggtcgaaggaggggtgtCGTCAGACA TGCAAACCGCCGTGTACGACGCCTACGCGTTCGGGCTGGGAGACCCTGTG GCGATTTCGGCGGCGCACAATGAAGGTATCTCAGAGCTGGCTACCTTGCT GGTGGAGAAAGCGCTTTCGGTAGGGCTGCAGGGTGCCAATGCTCCCGGCA TAGACGCGGGAAGACATCATGAGAAGGATGCACCGGGTGGGtgcgagggg gaaaaggaagaggtggtcACGGTGGCCTTTGTCGGGTTGCCGAACGCGGG GAAATCCAGTTTGGTGAATGCCGCCTTGGAGCACTTACCCCGGGCACCTC CCGGCCCGGGGGCCTCGCCTGACGAGGACACGGACAATGTCGACAGCACC agcgaggaagtggagggaagagtcCCTGCAGCATTGCCCTGGCCGCGGCC GTTGACGGCTTCAGTGCCGCGAATGATCACTtcggaggtggcgggcacCA CCCGGgacgtggtggcggtggactATGCCTACCGGGGGCGCCGCCTTCGT CTCGTCGACACGGCCGGCATCCGGAAACGGGGCCGGCAAGACCATCGCAA CCTACTGGAGCAATGGTCAGTAGCCGAGGCGTTCCGAGCCGTTCAGTTTG CGAATGTGGTGGTGTTGGTCCTCGACGCCCAACATCTCCGGCTTCGACGG CAGGAGCAAAGGGTGGCCTCCCGGGCATTTCAAGAAGGGCGGGCGTTGGT CGTCGTTGCGAACAAGAGCGACCTGTTGCAGACCTCTCCGGGTCTGTATG CCCAAAATGTACGGGATCAGttgcacctcctctctcctcaacTAGGCTCG CTCCCCGTTCTTGCCACCTCTGCTTTGACTCGGCAAGGCATAGGCAGCAT TTTGCCTGCCGTCCTTCGTGCGTACAGGGCTTGGAATACGCGGGTGAGCA CCGGCTTGCTCAATCGATGGCTGCTCGAAACGCAGCGACTCCGCGCATCC CCCCTCACGGCCACGACACGCAAAGTGGTGAAAATGAAATACATTTCTCA GATCAAGACACGCCCGCCCACATTCGCACTAGTCACGAATCGGGCAGGTA TGGAGGAATCGTACGTAAAATTTTTGAAAAACCACTTACGCGACAGTTTC GGGTTGCATGGAATGGATGTTCGGTTGTTGCTGCGGTGTACAGGCGGAGA GAACAACCCCTatgcggccaaggcggcggcagaggcagCGGAGCGAAAGA AAGCGTGGATGAATCgtcaaaagaagaaatgggcCCAGGAATCTCAGGAT GTCGGGTCTGGCAAAGCCAAGCGGGATGACGTAGAGGAACGAGTCGAGCA AGAACGGAAAAAAAGACGACAGCTGCGCGAGATGACCAAGCGCAGCAAAG TGGAAGCACGGAATAAACGACGAGCATACAACACGAGGGTGGTGGGATTA ACGCGGACATAA
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Coding sequence (CDS) from alignment at CM002459.1:171046..173007+

>rna2350 ID=rna2350|Name=rna2350|organism=Nannochloropsis gaditana|type=CDS|length=1962bp|location=Sequence derived from alignment at CM002459.1:171046..173007+ (Nannochloropsis gaditana)
ATGCACACGCACGTCCATGCCTCGAACGATAAGACTTCAACACGTCCGTT
TCGAGTTGCCTTGATTGGGAGACCGAATGTGGGTAAATCCACGCTATTTA
ATCGTCTCACGGGTACCGCCAAAGGGCGATGGACTGGAGGAACAGCCATT
GTCACTCCCATTCCTGGCACAACACGGGATCGAAAAACGGGGCCGTGTTC
CTATGCAGGAATTTCAATGGTGGTGACTGATACTGGAGGGTTggtagaag
aggacgaggtaAGGATTGAGGATGAGGCCGGGGACGTTGAGGGTGAAGAA
GTCGAGGACATGGACCCGCGCGGCCTGGTCAGAGAGAGGGTCCGAGCCCA
ACGGAAGCAAATCCAGGAACTGATCAATGCCCAGGTAGCCCAGGCCGTGA
AAGAGAGCGACGCGGTCCTTTTCCTGGTGGACGCGCGTGCGGGGGTAGGT
CCCGGCGAGGCTCACGTGGCCGGGTGGCTGCACAAGGTGGGGGCATCGGG
AAAGACCATCCTGGTGGCAAATaaggtcgaaggaggggtgtCGTCAGACA
TGCAAACCGCCGTGTACGACGCCTACGCGTTCGGGCTGGGAGACCCTGTG
GCGATTTCGGCGGCGCACAATGAAGGTATCTCAGAGCTGGCTACCTTGCT
GGTGGAGAAAGCGCTTTCGGTAGGGCTGCAGGGTGCCAATGCTCCCGGCA
TAGACGCGGGAAGACATCATGAGAAGGATGCACCGGGTGGGtgcgagggg
gaaaaggaagaggtggtcACGGTGGCCTTTGTCGGGTTGCCGAACGCGGG
GAAATCCAGTTTGGTGAATGCCGCCTTGGAGCACTTACCCCGGGCACCTC
CCGGCCCGGGGGCCTCGCCTGACGAGGACACGGACAATGTCGACAGCACC
agcgaggaagtggagggaagagtcCCTGCAGCATTGCCCTGGCCGCGGCC
GTTGACGGCTTCAGTGCCGCGAATGATCACTtcggaggtggcgggcacCA
CCCGGgacgtggtggcggtggactATGCCTACCGGGGGCGCCGCCTTCGT
CTCGTCGACACGGCCGGCATCCGGAAACGGGGCCGGCAAGACCATCGCAA
CCTACTGGAGCAATGGTCAGTAGCCGAGGCGTTCCGAGCCGTTCAGTTTG
CGAATGTGGTGGTGTTGGTCCTCGACGCCCAACATCTCCGGCTTCGACGG
CAGGAGCAAAGGGTGGCCTCCCGGGCATTTCAAGAAGGGCGGGCGTTGGT
CGTCGTTGCGAACAAGAGCGACCTGTTGCAGACCTCTCCGGGTCTGTATG
CCCAAAATGTACGGGATCAGttgcacctcctctctcctcaacTAGGCTCG
CTCCCCGTTCTTGCCACCTCTGCTTTGACTCGGCAAGGCATAGGCAGCAT
TTTGCCTGCCGTCCTTCGTGCGTACAGGGCTTGGAATACGCGGGTGAGCA
CCGGCTTGCTCAATCGATGGCTGCTCGAAACGCAGCGACTCCGCGCATCC
CCCCTCACGGCCACGACACGCAAAGTGGTGAAAATGAAATACATTTCTCA
GATCAAGACACGCCCGCCCACATTCGCACTAGTCACGAATCGGGCAGGTA
TGGAGGAATCGTACGTAAAATTTTTGAAAAACCACTTACGCGACAGTTTC
GGGTTGCATGGAATGGATGTTCGGTTGTTGCTGCGGTGTACAGGCGGAGA
GAACAACCCCTatgcggccaaggcggcggcagaggcagCGGAGCGAAAGA
AAGCGTGGATGAATCgtcaaaagaagaaatgggcCCAGGAATCTCAGGAT
GTCGGGTCTGGCAAAGCCAAGCGGGATGACGTAGAGGAACGAGTCGAGCA
AGAACGGAAAAAAAGACGACAGCTGCGCGAGATGACCAAGCGCAGCAAAG
TGGAAGCACGGAATAAACGACGAGCATACAACACGAGGGTGGTGGGATTA
ACGCGGACATAA
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Synonyms
Publications