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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100109g14.6594.mrna |
| Orig protein id | gnl|cribi|Naga_100109g14.6594 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:168855..170700 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2349 ID=rna2349|Name=rna2349|organism=Nannochloropsis gaditana|type=mRNA|length=1644bp
ATGAGCAGTTCTTCTCAACAAAGTTCGGAGAAAGTGGCCCTCCTGAAAGA
AGTAACGGGCATTGAGGATGATGACGTGGCCACCTTTCTCCTCAGTAAAA
ACAATTGGGATATACAGCACGCCGTGCAAGAGTACCTATCCGGTGAACCT
ACTCTTGCCTCCTCACCCCCTGCCCTAGTCTCCGCCTCCAGTCCCGCGGG
CCAGAGCCACGTGCGGCGGCGTAGCACATCCCCAGGCACAGAGCGTAGGG
TGCGTGCCCATCAACAACAATGGCTACAAGCACGACGGGACGGGAAGGAC
GCGGAAGTGGAGGAGTCCATGGGTGGCAGTGCCGGGGGAGGTGGAGAAGG
AGACGAAGCCCCTCTCCTGGGCCTTCGCGGGGGAGGGGAAGGCAATGGGG
AAGAAAGGGTTGGAGCGGGCAGCATGGAGATGGAGCAAGGAGGACGGAAC
GGAGCTCGGGGAGGGGGGGCGTCTCTCCCCTTCTATTTGGTCGGTAATGT
GCTGCACACGTTGCTCGCACCCGTGCGATACATAGCGGGCGTGGGGGAAG
GGATGGAAGGGGAGACACAGAATCCGAAGGAGGCTGCGGAGGCTTTCATC
AAAAACTACGAGAAAGAGTATCACTGCGCAGGGGTGGAGGGAGGGGGAGG
AGGGGAGGTGGAAGGAAGGGAGGGGGCGGGGGAAATCGGCGAAGGGGGAG
GCTACGCGTGGACCCCGCGGCCCCGTCCTCGATTTCTTCCCCTTTCGTTC
CAAGACGCCACCCGGCTTGCCTCCAGGGAAGGCAAGCTTCTGCTGGTCTA
CGTGCACGCCCCGCTCCACGAGCACACGCCCGCCTTTGTGCAACGCGTCT
TGAACACGGACCCGATCGTCTCCTTTCTGGACGGCAACATGTTGGTCTGG
GGGGGCTCGGTCCACTCCGCCGACGCCTGCCAGACCGCCCAGATCCTCGA
CGCCGCCGCCTTTCCCTTCATTGCTCTCGTCGCCTGTCAGCGGCACCCTC
ACCTGTCCGTCTTGGAGCACATGGAGGGGGTGACGGCAGACATAGGGCCC
GAGGCGATCCTCCAGCGGCTGACGGCGGCCATGGCCCGCCTGCAGGCGGC
AATGGAACAGCAGCAGGCCGTGGTGCGGGAACGGGAGGAACGATCCCGCC
TTCAAGCGGAACAGAACCGCGAGTACCAAGAAGCCTTGGAGGCGGACAGG
CGCCGGGAAGCCGCCTTGGTGGCGGAGAAGGCACGGGCGGTCCAGGAAGC
GGAAGCTGCCCAGAGAAGGGCAGAGGAGGAGAGGGAGGAAGAGGAAAAGA
AACGGGTGGTCTATGCCCAGTGCATCGCCGAGAAACAATCACGGCTTCCT
CCAGAGCCCGCACCTGGGTCACCTGGCGCTTTGCGGTTGCGGTTGCAGTT
CCCCCACGGGAAGAAATTGGACAGAAGGTTCCGTCCCACGGATTCCATCC
AGATCGTGAGGGATTTCATCGACGTGCAGGTGGCGGAAGAGGAGAAGGGG
GGGAAGGAGGAAGGGTGCAGGTTGGTGAACTATAGTCTGTCCACACCGTT
TCCGAAGAGGACCTTTGGCGAGGTAGGAATGACGTTGCAAGAAGTCGGAT
TGCACAGTGCCGACACAATATACATCACAGATTTGGATGCATAG back to topprotein sequence of rna2349 >rna2349-protein ID=rna2349-protein|Name=rna2349|organism=Nannochloropsis gaditana|type=polypeptide|length=396bp
MLFNYHRHTSHSYRNCTEPCGLTLMTRVFQRALSTLVVLSSSTPVASFLH
HGPASRMMGNKGGSQSLGSAIRRLPQVISAAAFWLSPPASFSSQRLSSSS
SSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAA
EEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFS
SISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKA
RETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDA
APDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMM
VKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGASAGAKV back to topmRNA from alignment at CM002459.1:168855..170700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2349 ID=rna2349|Name=rna2349|organism=Nannochloropsis gaditana|type=mRNA|length=1846bp|location=Sequence derived from alignment at CM002459.1:168855..170700- (Nannochloropsis gaditana)
ATGTTGTTCAATTACCACAGGCACACATCACATAGCTATCGCAATTGTAC
CGAGCCGTGCGGCCTGACGCTCATGACGCGTGTCTTTCAACGGGCCCTTA
GCACCCTTGTCGTTTTGTCCTCCTCGACTCCGGTCGCGTCGTTCTTGCAC
CACGGACCCGCCAGCCGCATGATGGGAAACAAAGGAGGTAGCCAGTCGCT
AGGGAGCGGTAAGTTTCCTTGACCGCAGAATTTCGGACCGAAGGTAGAGT
GATAAGTGAGGATAAGAAACGTGGAGCTTCCAGGAGTGTACGTGGTGTGT
AGTAATGCTACATATCTGAAGAAAAATCGCTAATTGCTTCTTTTCCCGCA
CATCCATGCATGTGACGGAGCACAGCCATTCGAAGGCTTCCACAGGTTAT
TTCGGCGGCCGCATTTTGGTTGTCCCCGCCCGCGTCCTTCAGCTCGCAAC
GTCTCAGCAGCAGCAGCAGCAGCAGCGCCGAAGGCACCAAGACGGAGGAA
AAAGGCGGGGGTCATTCTGTACCCGGTCAAGCCCCTGCAGAGCAAGACCC
TGAACTTGTCCGCGTCCAGACAATGCTGATGGAGCACCAGAAGACAGCCG
CGCGTCTCACAGCCGCGGAGGAGGCTCGCACGCTGGTTTACTACTCCACA
GGGTTGGGGGTTTTGGGCACGAATTCGCAAGCTTCCTCTCCCTTGGCCGG
GTACCCGGCGTCAGCCATGGTCGGATTTGCAGTGGACGAAAAAGGCCGGC
CCATATTCTCCTTCTCGAGCATTTCCACCCACAAGCAGGACCTGCTGAAG
GATCCGCGGGCCTCTTTCACAGTGGCGAGCAAGGTAGGTCGGAAAGGGCA
GGCGCGTTTGCATGGCTGAAACACGGCTATCCTGGACGGTTCCTCCTGGA
TAGTCTTCCTTTCCGACAAGGGGCGAGGATGGGAAGCACCACCTCTCGTC
CTGTCGAGTCCTCGTCTCCTCCCCTCCCGTTCGTTCACTCCCTGTCTCGA
CGTTTCTTCCGGTTTATCATGCACAGGATTTCAAGGGATTGGACGATGGA
CGCGTCTCTTTCGTGGGGGAAATCAAAAAAGTGCCCGAAGGGGAAGAAAC
GACGAAAGCGCGGGAGACGTATCTAGCCAGGCATCCGGGGCACTTCTGGG
TGGATTTCGGTGAGTTCAAAAAAATTAGGGGGGAAATTCCTCATTGAATC
AACGTTCTTATCGAGCATTAAGCACTGCCATTTCATGGATATTAATTTTG
TCATCGTATTGCCTTGTATTTTATCTGATGCGCGAACTCTCGCACGTGCT
GACATCTCCTCCCAGGGGGAACTTCGTGTATACTATCCTGCTTTGAGAGC
GCGCGATCGAATAAGGGACATTTGTGTTTGCCTTATGCGCGATATTGAAC
GCCTACAACCGTCGCTGACTGCCTTGTGGCTTACCCATTACTGTAACTCC
CCAGGAGATTTTGATTTCTTCCGTATGGATACCATGGCGGCAGTACGCTA
CAACGGGGGCTTTGCACGCTTTGGGGCGCTGGAGCCGGCGGACTACTTGG
ATGCCGCGCCCGACGCTTGTCAACCGTACGCAGCCGCAGTGATGAATCAC
ATGAATGCTGACCACTCCGACGCGACGAAAGCGATGGTCCTTCACTACGT
CGGCTTGGAAGTTGATAAGGCCGAAATTGTGTCCTTGGATAGGTTGGGCA
TGATGGTGAAAGTGGAGAGTAAATGGGGAGGAAGCAAAATCCGATTGCCT
TTTACAAGGGAATGCACGGATCGAAAAGTGTGTAAGGAGATCATCGTCGA
AATGACGCAAGCCTCAGCAGGAGCCTCCGCGGGGGCGAAGGTATGA back to topCoding sequence (CDS) from alignment at CM002459.1:168855..170700- >rna2349 ID=rna2349|Name=rna2349|organism=Nannochloropsis gaditana|type=CDS|length=4764bp|location=Sequence derived from alignment at CM002459.1:168855..170700- (Nannochloropsis gaditana)
GAGATTTTGATTTCTTCCGTATGGATACCATGGCGGCAGTACGCTACAAC
GGGGGCTTTGCACGCTTTGGGGCGCTGGAGCCGGCGGACTACTTGGATGC
CGCGCCCGACGCTTGTCAACCGTACGCAGCCGCAGTGATGAATCACATGA
ATGCTGACCACTCCGACGCGACGAAAGCGATGGTCCTTCACTACGTCGGC
TTGGAAGTTGATAAGGCCGAAATTGTGTCCTTGGATAGGTTGGGCATGAT
GGTGAAAGTGGAGAGTAAATGGGGAGGAAGCAAAATCCGATTGCCTTTTA
CAAGGGAATGCACGGATCGAAAAGTGTGTAAGGAGATCATCGTCGAAATG
ACGCAAGCCTCAGCAGGAGCCTCCGCGGGGGCGAAGGTATGAGATTTCAA
GGGATTGGACGATGGACGCGTCTCTTTCGTGGGGGAAATCAAAAAAGTGC
CCGAAGGGGAAGAAACGACGAAAGCGCGGGAGACGTATCTAGCCAGGCAT
CCGGGGCACTTCTGGGTGGATTTCGCCATTCGAAGGCTTCCACAGGTTAT
TTCGGCGGCCGCATTTTGGTTGTCCCCGCCCGCGTCCTTCAGCTCGCAAC
GTCTCAGCAGCAGCAGCAGCAGCAGCGCCGAAGGCACCAAGACGGAGGAA
AAAGGCGGGGGTCATTCTGTACCCGGTCAAGCCCCTGCAGAGCAAGACCC
TGAACTTGTCCGCGTCCAGACAATGCTGATGGAGCACCAGAAGACAGCCG
CGCGTCTCACAGCCGCGGAGGAGGCTCGCACGCTGGTTTACTACTCCACA
GGGTTGGGGGTTTTGGGCACGAATTCGCAAGCTTCCTCTCCCTTGGCCGG
GTACCCGGCGTCAGCCATGGTCGGATTTGCAGTGGACGAAAAAGGCCGGC
CCATATTCTCCTTCTCGAGCATTTCCACCCACAAGCAGGACCTGCTGAAG
GATCCGCGGGCCTCTTTCACAGTGGCGAGCAAGATGTTGTTCAATTACCA
CAGGCACACATCACATAGCTATCGCAATTGTACCGAGCCGTGCGGCCTGA
CGCTCATGACGCGTGTCTTTCAACGGGCCCTTAGCACCCTTGTCGTTTTG
TCCTCCTCGACTCCGGTCGCGTCGTTCTTGCACCACGGACCCGCCAGCCG
CATGATGGGAAACAAAGGAGGTAGCCAGTCGCTAGGGAGCGGAGATTTTG
ATTTCTTCCGTATGGATACCATGGCGGCAGTACGCTACAACGGGGGCTTT
GCACGCTTTGGGGCGCTGGAGCCGGCGGACTACTTGGATGCCGCGCCCGA
CGCTTGTCAACCGTACGCAGCCGCAGTGATGAATCACATGAATGCTGACC
ACTCCGACGCGACGAAAGCGATGGTCCTTCACTACGTCGGCTTGGAAGTT
GATAAGGCCGAAATTGTGTCCTTGGATAGGTTGGGCATGATGGTGAAAGT
GGAGAGTAAATGGGGAGGAAGCAAAATCCGATTGCCTTTTACAAGGGAAT
GCACGGATCGAAAAGTGTGTAAGGAGATCATCGTCGAAATGACGCAAGCC
TCAGCAGGAGCCTCCGCGGGGGCGAAGGTATGAGATTTCAAGGGATTGGA
CGATGGACGCGTCTCTTTCGTGGGGGAAATCAAAAAAGTGCCCGAAGGGG
AAGAAACGACGAAAGCGCGGGAGACGTATCTAGCCAGGCATCCGGGGCAC
TTCTGGGTGGATTTCGCCATTCGAAGGCTTCCACAGGTTATTTCGGCGGC
CGCATTTTGGTTGTCCCCGCCCGCGTCCTTCAGCTCGCAACGTCTCAGCA
GCAGCAGCAGCAGCAGCGCCGAAGGCACCAAGACGGAGGAAAAAGGCGGG
GGTCATTCTGTACCCGGTCAAGCCCCTGCAGAGCAAGACCCTGAACTTGT
CCGCGTCCAGACAATGCTGATGGAGCACCAGAAGACAGCCGCGCGTCTCA
CAGCCGCGGAGGAGGCTCGCACGCTGGTTTACTACTCCACAGGGTTGGGG
GTTTTGGGCACGAATTCGCAAGCTTCCTCTCCCTTGGCCGGGTACCCGGC
GTCAGCCATGGTCGGATTTGCAGTGGACGAAAAAGGCCGGCCCATATTCT
CCTTCTCGAGCATTTCCACCCACAAGCAGGACCTGCTGAAGGATCCGCGG
GCCTCTTTCACAGTGGCGAGCAAGATGTTGTTCAATTACCACAGGCACAC
ATCACATAGCTATCGCAATTGTACCGAGCCGTGCGGCCTGACGCTCATGA
CGCGTGTCTTTCAACGGGCCCTTAGCACCCTTGTCGTTTTGTCCTCCTCG
ACTCCGGTCGCGTCGTTCTTGCACCACGGACCCGCCAGCCGCATGATGGG
AAACAAAGGAGGTAGCCAGTCGCTAGGGAGCGGAGATTTTGATTTCTTCC
GTATGGATACCATGGCGGCAGTACGCTACAACGGGGGCTTTGCACGCTTT
GGGGCGCTGGAGCCGGCGGACTACTTGGATGCCGCGCCCGACGCTTGTCA
ACCGTACGCAGCCGCAGTGATGAATCACATGAATGCTGACCACTCCGACG
CGACGAAAGCGATGGTCCTTCACTACGTCGGCTTGGAAGTTGATAAGGCC
GAAATTGTGTCCTTGGATAGGTTGGGCATGATGGTGAAAGTGGAGAGTAA
ATGGGGAGGAAGCAAAATCCGATTGCCTTTTACAAGGGAATGCACGGATC
GAAAAGTGTGTAAGGAGATCATCGTCGAAATGACGCAAGCCTCAGCAGGA
GCCTCCGCGGGGGCGAAGGTATGAGATTTCAAGGGATTGGACGATGGACG
CGTCTCTTTCGTGGGGGAAATCAAAAAAGTGCCCGAAGGGGAAGAAACGA
CGAAAGCGCGGGAGACGTATCTAGCCAGGCATCCGGGGCACTTCTGGGTG
GATTTCGCCATTCGAAGGCTTCCACAGGTTATTTCGGCGGCCGCATTTTG
GTTGTCCCCGCCCGCGTCCTTCAGCTCGCAACGTCTCAGCAGCAGCAGCA
GCAGCAGCGCCGAAGGCACCAAGACGGAGGAAAAAGGCGGGGGTCATTCT
GTACCCGGTCAAGCCCCTGCAGAGCAAGACCCTGAACTTGTCCGCGTCCA
GACAATGCTGATGGAGCACCAGAAGACAGCCGCGCGTCTCACAGCCGCGG
AGGAGGCTCGCACGCTGGTTTACTACTCCACAGGGTTGGGGGTTTTGGGC
ACGAATTCGCAAGCTTCCTCTCCCTTGGCCGGGTACCCGGCGTCAGCCAT
GGTCGGATTTGCAGTGGACGAAAAAGGCCGGCCCATATTCTCCTTCTCGA
GCATTTCCACCCACAAGCAGGACCTGCTGAAGGATCCGCGGGCCTCTTTC
ACAGTGGCGAGCAAGATGTTGTTCAATTACCACAGGCACACATCACATAG
CTATCGCAATTGTACCGAGCCGTGCGGCCTGACGCTCATGACGCGTGTCT
TTCAACGGGCCCTTAGCACCCTTGTCGTTTTGTCCTCCTCGACTCCGGTC
GCGTCGTTCTTGCACCACGGACCCGCCAGCCGCATGATGGGAAACAAAGG
AGGTAGCCAGTCGCTAGGGAGCGGAGATTTTGATTTCTTCCGTATGGATA
CCATGGCGGCAGTACGCTACAACGGGGGCTTTGCACGCTTTGGGGCGCTG
GAGCCGGCGGACTACTTGGATGCCGCGCCCGACGCTTGTCAACCGTACGC
AGCCGCAGTGATGAATCACATGAATGCTGACCACTCCGACGCGACGAAAG
CGATGGTCCTTCACTACGTCGGCTTGGAAGTTGATAAGGCCGAAATTGTG
TCCTTGGATAGGTTGGGCATGATGGTGAAAGTGGAGAGTAAATGGGGAGG
AAGCAAAATCCGATTGCCTTTTACAAGGGAATGCACGGATCGAAAAGTGT
GTAAGGAGATCATCGTCGAAATGACGCAAGCCTCAGCAGGAGCCTCCGCG
GGGGCGAAGGTATGAGATTTCAAGGGATTGGACGATGGACGCGTCTCTTT
CGTGGGGGAAATCAAAAAAGTGCCCGAAGGGGAAGAAACGACGAAAGCGC
GGGAGACGTATCTAGCCAGGCATCCGGGGCACTTCTGGGTGGATTTCGCC
ATTCGAAGGCTTCCACAGGTTATTTCGGCGGCCGCATTTTGGTTGTCCCC
GCCCGCGTCCTTCAGCTCGCAACGTCTCAGCAGCAGCAGCAGCAGCAGCG
CCGAAGGCACCAAGACGGAGGAAAAAGGCGGGGGTCATTCTGTACCCGGT
CAAGCCCCTGCAGAGCAAGACCCTGAACTTGTCCGCGTCCAGACAATGCT
GATGGAGCACCAGAAGACAGCCGCGCGTCTCACAGCCGCGGAGGAGGCTC
GCACGCTGGTTTACTACTCCACAGGGTTGGGGGTTTTGGGCACGAATTCG
CAAGCTTCCTCTCCCTTGGCCGGGTACCCGGCGTCAGCCATGGTCGGATT
TGCAGTGGACGAAAAAGGCCGGCCCATATTCTCCTTCTCGAGCATTTCCA
CCCACAAGCAGGACCTGCTGAAGGATCCGCGGGCCTCTTTCACAGTGGCG
AGCAAGATGTTGTTCAATTACCACAGGCACACATCACATAGCTATCGCAA
TTGTACCGAGCCGTGCGGCCTGACGCTCATGACGCGTGTCTTTCAACGGG
CCCTTAGCACCCTTGTCGTTTTGTCCTCCTCGACTCCGGTCGCGTCGTTC
TTGCACCACGGACCCGCCAGCCGCATGATGGGAAACAAAGGAGGTAGCCA
GTCGCTAGGGAGCG back to top
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