EWM28326.1, cds2341 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|585110675|gb|EWM28326.1| (hypothetical protein Naga_100109g14 [Nannochloropsis gaditana]) HSP 1 Score: 822.772 bits (2124), Expect = 0.000e+0 Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0
Query: 1 MLFNYHRHTSHSYRNCTEPCGLTLMTRVFQRALSTLVVLSSSTPVASFLHHGPASRMMGNKGGSQSLGSAIRRLPQVISAAAFWLSPPASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGASAGAKV 396
MLFNYHRHTSHSYRNCTEPCGLTLMTRVFQRALSTLVVLSSSTPVASFLHHGPASRMMGNKGGSQSLGSAIRRLPQVISAAAFWLSPPASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGASAGAKV
Sbjct: 1 MLFNYHRHTSHSYRNCTEPCGLTLMTRVFQRALSTLVVLSSSTPVASFLHHGPASRMMGNKGGSQSLGSAIRRLPQVISAAAFWLSPPASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGASAGAKV 396
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|298711905|emb|CBJ48592.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 278.87 bits (712), Expect = 1.864e-88 Identity = 145/302 (48.01%), Postives = 193/302 (63.91%), Query Frame = 0
Query: 96 LSSSSSSSAEGTKTEEKGGGHSVP-------GQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYV--GLEVDKAEIVSLDRLGMMVKVESKWGGS-KIRLPFTRECTDRKVCKEIIVEMTQAS 387
+ +S S+ T+ +E+ GHS P G P ++ PE + + EHQ+ AARL+ EE R L+ YSTG GVL TNS+ L GYP+ ++VGF++D+KGRP+F+FSS+S H DL D R S TV + FKG DGRVS +G++ KVPE E+ RE Y +HP +WVDFGDF RMDT+ A+R+ GGFA G + P DYL APDA ++A + HMN DHSD T+AM+ H++ G+EV A+I ++DRLGM V V G S K+RLPF R RK K +IVEMTQA+
Sbjct: 1 MEASGDSAESATEKKEEASGHSPPKATGHAAGPGP-QRSPEQEALAARIQEHQQAAARLSHTEEVRNLMQYSTGFGVLSTNSRT---LEGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPE-EDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 297
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|873232702|emb|CEM04601.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 282.337 bits (721), Expect = 8.116e-88 Identity = 150/313 (47.92%), Postives = 203/313 (64.86%), Query Frame = 0
Query: 96 LSSSSSSSAEGTKTEEKG-------------GGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGASAGAK 395
LSSS+S++A+ TEE+ GGH+VP Q E E + +Q +MEHQK AA L+ AEEAR+LV Y+ G + T SS GYP +V FAVDE+GRPI S +STH QDL+K+ +A+ T+ ++DFKGL DGRVS VG + +V +ET +E +L +HP +WV+FGDF ++RMD + +R+ GGFAR G ++PA+YL A PD ++ V HMNADH DA AMV HY+GL VD A+I +LDRLGM +KV + K+RLPF R RK K+I+V+MT+A+ GASA A+
Sbjct: 133 LSSSTSTAADAPATEEEEEEEEEDRLGAGARGGHAVPEQP--EISAEEMELQKKVMEHQKAAALLSPAEEARSLVEYADGYATIST---ISSHFEGYPGGGVVQFAVDEEGRPILCLSGLSTHGQDLIKNQKAAVTIRARDFKGLSDGRVSLVGTMTRV-TADETAPLKEAFLRKHPEAYWVNFGDFKWYRMDEVVGLRFVGGFARVGDIDPAEYLAAKPDDIMAFSGPVAGHMNADHGDANVAMVKHYIGLPVDTADITTLDRLGMTLKVTREGQSMKLRLPFIRPAESRKEIKDILVDMTRAAKGASAPAE 439
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|552813661|ref|XP_005844001.1| (hypothetical protein CHLNCDRAFT_139512 [Chlorella variabilis] >gi|307103641|gb|EFN51899.1| hypothetical protein CHLNCDRAFT_139512 [Chlorella variabilis]) HSP 1 Score: 262.307 bits (669), Expect = 1.579e-81 Identity = 142/316 (44.94%), Postives = 191/316 (60.44%), Query Frame = 0
Query: 81 AAFWLSPPASFSSQRLSSSSSSSAEGTKT---EEKGGGHSVPGQAPAE---QDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASAGA 390
A+ W P S+ R S + A K EE GH P + A DPE++ + EHQ+TAAR++ AEEARTLV GVL TN++ L GYP+ ++V FA D KGRP+F+FS++S H D+ KD R SFTV ++ F+G+ DG V+ +G+ + EE A+E Y+++HP WV+FGDF FRM+ + + R GFA G + +Y A PD P++A V HMNADH++AT AM+ HYVG+ V KA I+S+DRLGM V E K RLPF R TDRK KE+IVEMT+A+A A
Sbjct: 29 ASAWRQPRTVPSAARAESQQAGPAAAEKQAEKEEPQRGHQAPQNSAANLEATDPEILAYR----EHQQTAARISLAEEARTLVALGK-FGVLSTNARGE--LEGYPSGSVVEFAADSKGRPVFAFSTMSPHTADIKKDGRCSFTVMAEPFRGIADGHVTLIGKAAPISNEEERAAAKEVYMSKHPSSVWVEFGDFGLFRMNEIVSARLVAGFAPSGKITEEEYGAAQPDPVAPFSAPVAGHMNADHAEATVAMMKHYVGITVSKAAIMSIDRLGMTVSCERGQDQFKARLPFPRPATDRKSIKELIVEMTRAAAAA 337
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|552814046|ref|XP_005844094.1| (hypothetical protein CHLNCDRAFT_139511 [Chlorella variabilis] >gi|307103734|gb|EFN51992.1| hypothetical protein CHLNCDRAFT_139511 [Chlorella variabilis]) HSP 1 Score: 261.536 bits (667), Expect = 3.258e-81 Identity = 139/328 (42.38%), Postives = 200/328 (60.98%), Query Frame = 0
Query: 64 SQSLGSAIRRLPQVISAAAFWLSPPASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAE---QDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGLEVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQASA 388
S+ G++ RR P+ + P++ ++ + +++ + + EE GH P + A DPE++ + EHQ+TAAR++ AEEARTLV GVL TN++ L GYP+ ++V FA D KGRP+F+FS++S H D+ KD R SFTV ++ F+G+ DG V+ +G+ + EE A+E Y+++HP WV+FGDF FRM+ + + R GFA G + +Y A PD P++A V HMNADH++AT AM+ HYVG+ V KA I+S+DRLGM V E K RLPF R TDRK KE+IVEMT+A+A
Sbjct: 24 SRQQGASARRQPRTV---------PSAARAESQQAGPAAAEKQAEKEEPQRGHQAPQNSAANLEATDPEILAYR----EHQQTAARISLAEEARTLVALGK-FGVLSTNARGE--LEGYPSGSVVEFAADSKGRPVFAFSTMSPHTADIKKDGRCSFTVMAEPFRGIADGHVTLIGKAAPISNEEERAAAKEVYMSKHPSSVWVEFGDFGLFRMNEIVSARLVAGFAPSGKITEEEYGAAQPDPVAPFSAPVAGHMNADHAEATVAMMKHYVGITVSKAAIMSIDRLGMTVSCERGQDQFKARLPFPRPATDRKSIKELIVEMTRAAA 335
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|551542006|ref|XP_005759230.1| (hypothetical protein EMIHUDRAFT_453407 [Emiliania huxleyi CCMP1516] >gi|485607275|gb|EOD06801.1| hypothetical protein EMIHUDRAFT_453407 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 257.684 bits (657), Expect = 2.270e-80 Identity = 137/267 (51.31%), Postives = 180/267 (67.42%), Query Frame = 0
Query: 128 PELVR----VQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLK-DPRASFTVASKDFKGLDDGRVSFVGEIKKV-PEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYVGL-EVDKAEIVSLDRLGMMVKVESKWGGSKIRLPFTRECTDRKVCKEIIVEMTQAS 387
PEL VQ +MEHQ+ AARLT AE+AR+LV YS+G VL T SS + GYP A+VGFA D G P+F FS++S+H +DL K +A+ TV +K F+G DGRV+ +G++++V E E +E Y RHP FWVDFGDF F+RM ++ AV + GGFAR A P +YL A D Q +AA VM HMN DH+++T AMV+HYVGL +V+ A++V+LDRLG MV+V + K+RLPF R DRK K +IVEMTQA+
Sbjct: 2 PELSEEEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLST---LSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRMASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYVGLPDVEAAQLVALDRLGFMVQVTRQGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 265
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|223995229|ref|XP_002287298.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976414|gb|EED94741.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 270.781 bits (691), Expect = 2.447e-77 Identity = 138/282 (48.94%), Postives = 182/282 (64.54%), Query Frame = 0
Query: 116 HSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYV-GLEVDKAEIVSLDRLGMMVKVESKWGGS------KIRLPFTRECTDRKVCKEIIVEMTQASAGA 390
H V G E DPE ++Q L EHQ+ A +L + R+L+ Y+ G V+ TNS+A+ G+P ++VGFA DE GRP+F FS +S+H QDLL DPR S T+ASK+FKG DGRV+ +G++ VP+ EE +A+ TYL +HPG FWV FGDF+FFRMD + +R+ GGFAR G++ P +Y A PD + + HMN DH D+T AMV H + GLEV +AEI S+D LGM VK S KIRLPF R RK K++IVEMT+A+ GA
Sbjct: 1210 HDVRGDTTMEMDPEEAKLQARLAEHQQNAPKLGFPVDVRSLIEYNHGFAVMSTNSKAN---PGFPGGSVVGFAPDELGRPLFIFSGMSSHTQDLLADPRCSVTIASKEFKGAADGRVNLMGKVTLVPK-EEREEAQATYLKKHPGAFWVSFGDFNFFRMDEIVDIRFVGGFARAGSVTPEEYTKAKPDPVAGFGPHIAQHMNEDHMDSTIAMVAHAIPGLEVSEAEITSVDSLGMFVKCTRTPRASDQPQQFKIRLPFPRRIEGRKEIKDVIVEMTRAAQGA 1487
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|219119347|ref|XP_002180436.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407909|gb|EEC47844.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 234.572 bits (597), Expect = 9.684e-72 Identity = 129/262 (49.24%), Postives = 165/262 (62.98%), Query Frame = 0
Query: 139 EHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYV-GLEVD------KAEIVSLDRLGMMVKVESKWG------GSKIRLPFTRECTDRKVCKEIIVEMTQAS 387
EHQ+TA +L A + RTLV Y+ G V+ TNS+A GYP ++VGFA DE GRP+F FS +S H QD+L DPR S TVA+KDFKG DGRV+ +G ++ + ++ KARE YL +HPG FWVDFGDF++FRM ++ VR+ GGFAR GA+ +YL A PDA + + HMN DH AT AMV V G+E D +A I S+D LGM VKV + G K+RLPF DRK K I+EMT A+
Sbjct: 2 EHQQTAPKLDWATDVRTLVQYNHGFAVMSTNSKADE---GYPGGSVVGFAPDEDGRPLFIFSGMSAHTQDILADPRCSLTVAAKDFKGAADGRVNLMGSVELIKGDQDKAKAREIYLQKHPGAFWVDFGDFNWFRM-SVEKVRFVGGFARAGAVTQDEYLAAKPDAVSEFGPKIAAHMNEDHMPATIAMVQGNVPGMEHDPENPITEAIITSVDSLGMYVKVTREKGIGFLPQSFKLRLPFPEVAKDRKDVKVRIMEMTNAA 259
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|1210517791|dbj|GAX23338.1| (hypothetical protein FisN_27Lh114 [Fistulifera solaris]) HSP 1 Score: 224.942 bits (572), Expect = 5.056e-67 Identity = 128/317 (40.38%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 88 PASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYV-----GLEVDKAEIVSLDRLGMMVKVESKWGGS------KIRLPFTRECTDRKVCKEIIVEMTQASAGASAG 393
P F+ L SS+S H V G ++ PEL + +HQ+ A +L A + RTLV S G V+ T S+A +P ++VGF+VDE+GRP+F FS +S+H QD+L +P S TVASK FKG DGRV+ +G + EE +A++ Y +HPG FW FGDF++FRM ++ VR+ GGFAR G + +Y A PDA + + HMN DH AT A+V + + G + AEI S+D LGM VKV + + K+R+PF R DR K++IVEMTQASA ++A
Sbjct: 29 PQQFAQSTLHVSSASILRNNAPR-----HDVGGDPMSQLSPELQKQLMEYQQHQQNAPKLDFATDVRTLVQNSHGFAVMSTFSKAHPE---FPGGSVVGFSVDEQGRPLFCFSGMSSHTQDILANPNCSLTVASKQFKGAADGRVNLMGTATLIKSKEEIEQAQQLYNQKHPGAFWTAFGDFNWFRM-SVEHVRFVGGFARAGTVTADEYAQAQPDAISAFGPHIAEHMNDDHQSATIAIVQNAIPGMKEGPTITAAEITSVDSLGMFVKVTREEAIAFLPEQFKVRVPFPRPAQDRGDVKKLIVEMTQASAASTAN 336
BLAST of EWM28326.1 vs. NCBI_GenBank
Match: gi|1210512647|dbj|GAX28237.1| (hypothetical protein FisN_27Hh114 [Fistulifera solaris]) HSP 1 Score: 224.557 bits (571), Expect = 7.042e-67 Identity = 129/317 (40.69%), Postives = 178/317 (56.15%), Query Frame = 0
Query: 88 PASFSSQRLSSSSSSSAEGTKTEEKGGGHSVPGQAPAEQDPELVRVQTMLMEHQKTAARLTAAEEARTLVYYSTGLGVLGTNSQASSPLAGYPASAMVGFAVDEKGRPIFSFSSISTHKQDLLKDPRASFTVASKDFKGLDDGRVSFVGEIKKVPEGEETTKARETYLARHPGHFWVDFGDFDFFRMDTMAAVRYNGGFARFGALEPADYLDAAPDACQPYAAAVMNHMNADHSDATKAMVLHYV-----GLEVDKAEIVSLDRLGMMVKVESKWGGS------KIRLPFTRECTDRKVCKEIIVEMTQASAGASAG 393
P F +Q S SS S H V G ++ PEL + +HQ+ A +L A + RTLV S G V+ T S+A +P ++VGF+VDE+GRP+F FS +S+H QD+L +P S T+ASK FKG DGRV+ +G + EE +A++ Y +HPG FW FGDF++FRM ++ VR+ GGFAR G + +Y A PDA + + HMN DH AT A+V + V G + AEI S+D LGM VKV + + K+R+PF R DR K++IVEMTQASA ++A
Sbjct: 25 PQQFFAQSTSCVSSPSI----LRNSAPRHDVGGDPMSQLSPELQKQLMEYQQHQQNAPKLDFATDVRTLVQNSHGFAVMSTFSKAHP---DFPGGSVVGFSVDEQGRPLFCFSGMSSHTQDILANPHCSLTIASKQFKGAADGRVNLMGTATLIKSKEEIEQAQQLYNQKHPGAFWTAFGDFNWFRM-SVEHVRFVGGFARAGTVTADEYAQAQPDAISAFGPHIAEHMNDDHQSATIAIVQNAVPGMKEGPTITAAEITSVDSLGMFVKVTREEAVAFLPQQFKVRVPFPRPAQDRGDVKKLIVEMTQASAASTAN 333 The following BLAST results are available for this feature:
BLAST of EWM28326.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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