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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100367g2.6894.mrna |
| Orig protein id | gnl|cribi|Naga_100367g2.6894 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:141050..142881 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2339 ID=rna2339|Name=rna2339|organism=Nannochloropsis gaditana|type=mRNA|length=1068bp
ATGAGCAGAAGAAGAAAATACAGGAGTCAACAGATATCAGCCAAGGCTAC
TGTGGGGGCGCTTTTAGTTTGCAACTCCGCCAACGCCTTCTTGTGGGGTG
GTAACTGTGGTTCGTTGTATTCCTCATCGCGGCGGCTGTGCATTTCCAAA
GGCCATCTCAGCCGAGCACCAGTGCTGCCGCTCCCCTTTTCAATCGTTTC
CGTAAAGAGAGTCCCGCGTCCTGTTTTTTTCAACATGGACAAGACAAAAT
TTTGTTTTCGATCTTTGACTGCTTTGGCATCCATCAGGAATGACGACCCA
CGAGAAGATGAAACAGGACGAGCACCACCATCACCGCAACCACCTCAAGT
TGAGGAGCATCAGCCGCAGGAGCGGGAGCAGATCGAGCCATCCCCTGACA
TCTTGGATACTCAAGGTTCCTCCACTCCCCCTTCTCCCCCCTCTGAGGCA
GAAACCACCGGGCGATCGAACGCACCGCCGCCTCTCACGCCGGAGGGGGC
TTCTCCCTACCCGTACCCCCCTTATGGCTACCCGCCCTACCCGGCTGCTT
ACTACTACCCACCCCCACCTTCCTTCTATCCTCCTCCTCCCCCATCTACG
GACGCCCCGTCCTCTTCCTCTCCCAGCGACTCCTCCACCGTCCCCGCGGA
CGCGCCGTCCCCTCCCCCGTACGACCTTAATGCAGCCTCCTATTTCCCGG
GAGGTTCTCCGTACTACCCACCTCCGCCCTATCCTTCACCCCCTCCTTCG
GCAGAAGGAGAGGATGACAACACACAAGACCCCAATCTTTCGGCCGGGAC
CGCACAGCTCCAGCAACAAGCAGCGCAGCAGCAAGAGTGGATGCAGTCCA
TGTACGGCGCGTATTACAACCAGACAAGGGGAGGAGGAGGGGGCGAAGGA
AGGGAGGGGGAAGGGTGGGAAGAGGCGTATGCGCGGGCCATGTATTCGTA
TTATCCTCCTCCCCCTTATTACTTTGACCCGTACTACGGTTTCACGGGAC
CGGTGGCGTGGGGAGAGGGGGAGGTGGAGGAGGAGGAGGACGAGTGGACG
ACGCCATCACGTCGGTGA back to topprotein sequence of rna2339 >rna2339-protein ID=rna2339-protein|Name=rna2339|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MKGEGRSRSTGPDTPPHVPPTPPASSSLPSNRLYAEAARQRERLARRIAD
TRVPECTFHPTLVSRAASTSRTRPGDRASEIPFVDRAQSYQRHVESKLSA
LRKEQAAQEQPSFRPTLPVHTGKKGISVGLQRFCRPAPDNAMRDLFLWPR
KFGHRGFRQNREKKPYLLC back to topmRNA from alignment at CM002459.1:141050..142881+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2339 ID=rna2339|Name=rna2339|organism=Nannochloropsis gaditana|type=mRNA|length=1832bp|location=Sequence derived from alignment at CM002459.1:141050..142881+ (Nannochloropsis gaditana)
ATGAAGGGGGAAGGTAGAAGCAGGTCGACAGGTCCGGACACCCCCCCCCA
TGTGCCCCCTACTCCCCCGGCGAGCTCATCCCTACCAAGCAATCGTCTCT
ACGCCGAGGCGGCGCGGCAACGGGAACGGTTGGCCCGGCGCATCGCCGAC
ACCAGAGTCCCAGAATGCACCTTCCATCCAACGCTTGTCTCCCGGGCTGC
CTCCACGAGCCGAACACGCCCTGGAGATCGGGCCTCTGAGATCCcttttg
tggaccgggccCAGTCGTACCAACGGCACGTGGAGAGCAAGCTGAGCGCC
CTGCGGAAGGAACAAGCCGCCCAGGAACAGCCCTCGTTCCGGCCGACGCT
CCCCGTGCATACCGGAAAGAAAGGTGCGACGCGGGTTATGGGAGGACAAG
CGGGAATAAAGCGTGGCCATGGACCGGGTGAAACGGTCTTCGATTTTTTG
GCGCGAACCGGGACGGCTGCCTCGAACGCGCACAGCGCCCGTGTCAGCAA
CAGTCCCAGAGACGCCCCTGCCACCCTTTTCTCCACCGTGACCtcgcccg
ctccttcccacaAGAGGACGCACACGCGTCGCACCCTGTCGTTGGGGGGG
GCCGAAGCCCGGGCCCTCTTTGCCCGATTGCACGCAGAAGCCAcgcagaa
agaagagaaagtgaAAACGTGGGAAGCAGAGCACATGGAGCTCGAGATTC
AAGGATGCACGTTTGCCCCTTGTTTGCCCGGTGCCCCACCTGTACTACCC
CGGTCTTCTGCGGCTTCGGCTTCCACCGCAGCGGGTGGGGATGCTGCCCA
AAGGCCCCAGGCGACGGCCGcgtcccctctccctcctacctccctgcctc
gctccccccGCCGCACCACGGTCGTTGCACCGGATgtcttttcccgcctc
taCCCCGGAAACACAAGCACGGACTCTGCCTTGCCCTTgggctctccctc
ttctcctgccgCGTCGCCCGCGACGGCCGtcgcgccctcccgccgccctt
cTATCACCTCTGCGTCTCTCTCGTCGTTCCAGGCCATCCAGGAGCGTGTC
TCCGGCAACAAGAAAAGCGAAGACGAGAAACACAGCAAACAGGcgcttcc
acccccttcgcCAAAGATCCAGTCAACAGAGACcacatcccccctccctc
cttctcctcctctaccgcgttcaccctcccttcccctggccAGCGATGAG
GATGACGCCATCCTTGGTACCGTTTTCGAACGCTTGGGCCGCGAGCTTCA
AGCAAGTCGAGAGCATGCCGAAGCGGCAGCATTCTCGCAGGGAAAATCCG
CTCAACCGCCGTCACCATCTCCGACGACGCATACACAGAGGTCCAGTCTT
CTACGCGAGGCGCACCCATTGCCTTACCCGACCGTCCCGTGCATGGTggc
ctgtccctcccttttcccctccgaggaaacggaggtcgaggaaaagaagg
caggagagaggcaggagggcatGAGTAAGAGCCCCTCACGGAAGAATATG
GACAGAGGAGtggataaggagggaggggaggagagggcggagggcggggt
cgggccagaggaaggggaaccGAGGGAGATATCCCGAAGTGCTGAGGTTT
TCTTTTAacaaagagaaaagggggggggggttgggagaggacgcaTCGCC
GGCTGTGATGGACATGGAGGTGTATTTTGTATAACCTGTACGAAGGTATC
AGCGTTGGTCTGCAGAGGTTTTGTAGGCCAGCACCGGATAATGCGATGAG
AGACTTATTCTTATGGCCCCGGAAATTTGGTCACAGAGGGTTCAGACAAA
ACAGGGAGAAAAAGCCATACTTATTATGTTGA back to topCoding sequence (CDS) from alignment at CM002459.1:141050..142881+ >rna2339 ID=rna2339|Name=rna2339|organism=Nannochloropsis gaditana|type=CDS|length=1020bp|location=Sequence derived from alignment at CM002459.1:141050..142881+ (Nannochloropsis gaditana)
ATGAAGGGGGAAGGTAGAAGCAGGTCGACAGGTCCGGACACCCCCCCCCA
TGTGCCCCCTACTCCCCCGGCGAGCTCATCCCTACCAAGCAATCGTCTCT
ACGCCGAGGCGGCGCGGCAACGGGAACGGTTGGCCCGGCGCATCGCCGAC
ACCAGAGTCCCAGAATGCACCTTCCATCCAACGCTTGTCTCCCGGGCTGC
CTCCACGAGCCGAACACGCCCTGGAGATCGGGCCTCTGAGATCCcttttg
tggaccgggccCAGTCGTACCAACGGCACGTGGAGAGCAAGCTGAGCGCC
CTGCGGAAGGAACAAGCCGCCCAGGAACAGCCCTCGTTCCGGCCGACGCT
CCCCGTGCATACCGGAAAGAAAGGTATCAGCGTTGGTCTGCAGAGGTTTT
GTAGGCCAGCACCGGATAATGCGATGAGAGACTTATTCTTATGGCCCCGG
AAATTTGGTCACAGAGGGTTCAGACAAAACAGGGAGAAAAAGCCATACTT
ATTATGTTGAATGAAGGGGGAAGGTAGAAGCAGGTCGACAGGTCCGGACA
CCCCCCCCCATGTGCCCCCTACTCCCCCGGCGAGCTCATCCCTACCAAGC
AATCGTCTCTACGCCGAGGCGGCGCGGCAACGGGAACGGTTGGCCCGGCG
CATCGCCGACACCAGAGTCCCAGAATGCACCTTCCATCCAACGCTTGTCT
CCCGGGCTGCCTCCACGAGCCGAACACGCCCTGGAGATCGGGCCTCTGAG
ATCCcttttgtggaccgggccCAGTCGTACCAACGGCACGTGGAGAGCAA
GCTGAGCGCCCTGCGGAAGGAACAAGCCGCCCAGGAACAGCCCTCGTTCC
GGCCGACGCTCCCCGTGCATACCGGAAAGAAAGGTATCAGCGTTGGTCTG
CAGAGGTTTTGTAGGCCAGCACCGGATAATGCGATGAGAGACTTATTCTT
ATGGCCCCGGAAATTTGGTCACAGAGGGTTCAGACAAAACAGGGAGAAAA
AGCCATACTTATTATGTTGA back to top
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