|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100846g1.7642.mrna |
| Orig protein id | gnl|cribi|Naga_100846g1.7642 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:136712..137674 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2337 ID=rna2337|Name=rna2337|organism=Nannochloropsis gaditana|type=mRNA|length=2233bp
CGATTGCAATAAGTGCGAGCAATCCTGCTCAGCCGAAATCGCTTTTTTGT
TTGTGTGCAAAAGTGAGCCCCTCCGAATTTAACATAGTGTTCACCGTATA
TAAATGCTTCCAGAATGAGTGCACAGAGAGATACTGGTTGCGTTTAAATC
GGGTCAATGGTGGCAGCGTGACTTTTCCGCGTCACAGTTTCCTTCGTTCC
TCCTTCCGAGAACTCCCGGTAACTTGACCAAGCGGTCCTCAGTGCATGGG
GGCACATGAAGAATTCGACACCCAAGCTCATCATACGCATGTAGACAACA
ACGCTACAGCCGTTGACGTGGGGTGTTGTGTTTGCAGGCACACTGTTATC
AAAGTCTGTCCTAGTTTATTTATCCTCCCCATGTTGAAGTTCAACTTGTC
ACACGTTCGTTCCTGCTTCTGCGGCCTTGACCACCTGTCCCGCCTATGCC
TCTCTTTTTAGCCCGTTGCGGACTCATCTGACCGCTTAAAAAATCTTGAT
ACATGTAAATCTACAGTTTAACGTGCTATGAGCGCTGGTATCAATACAAG
CGCCTGCCGGCCTCCTTCTTTTCCAGAGCTGCCCTCTACCACCTCCGGCT
TTCCTCGCGCAAACGTTGGGAGACGGGTCAAACATGTGACAGCGAATTAT
CCATGTGAATCCTACGATAAACGTACGAAGCAGTATGCTGTATCCAGTCA
CAATCCTCTTGAATGGACCCGTAAAGGGCAGTCTTTTTGGCTTCGCTGGA
TCTTGCATCTTGGTGCCTGCATACATTTCCTAATGCAAACCCTCAGGCTA
TTCCAGCATGCGCAGTTGTGCCCCGGTTTTCAGGCTGCCTTTAGCGGTGC
TCCCATAGAGGAAGAAGCCCTGAAGATATTAAGTCGTGACCTCCCTGTTC
TACTGGTAATTTATCTCATCGTTGCCGTCAAAGCTGCAGACTTGCTCAAC
ATGGCTTTTGCCATCTGGGTTCTTCTAATTCGTCCCAATGTACACATGCC
GATTATGACGCTGGGATGGCGCATCCACTTGCTCTTGTTTATATTTTCAG
GCTTTTGTGGGCCCTGTCTGGCTTCTGATCTTCCTTTCTGGAGGTTGCTC
TCTGCGCACTCAGTATACAATATCGTCCTTCTCCTTGTCCTCCCCCTCTA
AAACTCACGTTGAGACAAGCTGTAAGCAGGGGTTCAAAAACTTGCGTCGA
CAACTTTGTGAACAAGAAGAGAATTGAGAAGTAAAATAAGGTACATGTAG
GGTGGAAAACGGTTGGCTAAGATTTAGACGAGAGGAGAAACGCATGAGTA
AGGATGACGGGTCGGTGTTACCTACAAATGTCACCCGGAGTTGGCGAAAC
ATGTTGAAGAAGCGTCCTAACAATGGCTCTTATTTCCACAAATGCCATTA
CACGATCAACGCAATCTCTCGAATTTCCGCTACTTTCTCGGTCAAAGGCT
CGCTGACCCGTCCTATCCCAAAGTCCTGGTTGTTGCCTTATCCCCTCTCC
TATTTCCTCCTCTGCGCCCTTTTCTGATGTGATCGTTCCCTCCGCCCATC
ATGCCTGTCGTTCCAAGGCACAAGTCGCAGCCATTCCTCGCCTGCTTTTC
CTCCCTCTCCTTCGCGTCTCACCCGCGCAACATACTCTTCTTCCCCCCTT
CCCCTCCCTCCCCTCCCTCCCGTCCCTCTTCCTCCTCCTCCCAGGGTGCC
ACCCCTCTTTCCTCCTCACTCACGTCGTCCCGATACATTTGCCACAAACC
GAAGACGCTTAAAGGGGTGAAAGGCGCCCACCCAATCACGAAACCTTGCA
TGTAGTACAAAGAGCGCTCCTCCGTCAGTAGAGTAGGGTAACTCCGGCGG
CCGTTCCAACTCAAAAACGATTCCCGCCCGAAGCGAAAGACGTTGCTGCG
CGCGTCAAACGTCCACTCCCCCTTGTTTCCCCCATTGACCCAAATGACGC
GACCGTCCTCCCGAAAGAATACCCGGGTCCGTTGCACGCGTTTCAACGGA
TTCCAACCGTCCGAAACGGTCCCCAACGTCCAGGTCGTGTTCACAAACTG
CTCCCGGCGGAAGACGGGAAGCTCGGCGTCTTCCGGGGGGTCCCCGGAGG
GCAAAAAAGGTAAGTCCGGCGCTTCTTCTCCTTCCCGTTGGTAGTACCCG
AAGATGGACCGACGTTTACCCGCCTCCGCCGGGTCGAAAGATGTGCCTTC
GACCAGCTGTAGGTATTTTTGTTCCCACCAAGC back to topprotein sequence of rna2337 >rna2337-protein ID=rna2337-protein|Name=rna2337|organism=Nannochloropsis gaditana|type=polypeptide|length=212bp
SPPSGAPKAWWEQKYLQLVEGTSFDPAEAGKRRSIFGYYQREGEEAPDLP
FLPSGDPPEDAELPVFRREQFVNTTWTLGTVSDGWNPLKRVQRTRVFFRE
DGRVIWVNGGNKGEWTFDARSNVFRFGRESFLSWNGRRSYPTLLTEERSL
YYMQGFVIGWAPFTPLSVFGLWQMYRDDVSEEERGVAPWEEEEEGREGGE
GGEGGKKSMLRG back to topmRNA from alignment at CM002459.1:136712..137674- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2337 ID=rna2337|Name=rna2337|organism=Nannochloropsis gaditana|type=mRNA|length=963bp|location=Sequence derived from alignment at CM002459.1:136712..137674- (Nannochloropsis gaditana)
CTCCCCTCCTTCCGGCGCGCCCAAAGCTTGGTGGGAACAAAAATACCTAC
AGCTGGTCGAAGGCACATCTTTCGACCCGGCGGAGGCGGGTAAACGTCGG
TCCATCTTCGGGTACTACCAACGGGAAGGAGAAGAAGCGCCGGACTTACC
TTTTTTGCCCTCCGGGGACCCCCCGGAAGACGCCGAGCTTCCCGTCTTCC
GCCGGGAGCAGTTTGTGAACACGACCTGGACGTTGGGGACCGTTTCGGAC
GGTTGGAATCCGTTGAAACGCGTGCAACGGACCCGGGTATTCTTTCGGGA
GGACGGTCGCGTCATTTGGGTCAATGGGGGAAACAAGGGGGAGTGGACGT
TTGACGCGCGCAGCAACGTCTTTCGCTTCGGGCGGGAATCGTTTTTGAGT
TGGAACGGCCGCCGGAGTTACCCTACTCTACTGACGGAGGAGCGCTCTTT
GTACTACATGCAAGGTTTCGTGATTGGGTGGGCGCCTTTCACCCCTTTAA
GCGTCTTCGGTTTGTGGCAAATGTATCGGGACGACGTGAGTGAGGAGGAA
AGAGGGGTGGCACCCTGGGAGGAGGAGGAAGAGGGACGGGAGGGAGGGGA
GGGAGGGGAAGGGGGGAAGAAGAGTATGTTGCGCGGGTGAGACGCGAAGG
AGAGGGAGGAAAAGCAGGCGAGGAATGGCTGCGACTTGTGCCTTGGAACG
ACAGGCATGATGGGCGGAGGGAACGATCACATCAGAAAAGGGCGCAGAGG
AGGAAATAGGAGAGGGGATAAGGCAACAACCAGGACTTTGGGATAGGACG
GGTCAGCGAGCCTTTGACCGAGAAAGTAGCGGAAATTCGAGAGATTGCGT
TGATCGTGTAATGGCATTTGTGGAAATAAGAGCCATTGTTAGGACGCTTC
TTCAACATGTTTCGCCAACTCCGGGTGACATTTGTAGGTAACACCGACCC
GTCATCCTTACTC back to topCoding sequence (CDS) from alignment at CM002459.1:136712..137674- >rna2337 ID=rna2337|Name=rna2337|organism=Nannochloropsis gaditana|type=CDS|length=639bp|location=Sequence derived from alignment at CM002459.1:136712..137674- (Nannochloropsis gaditana)
TCCCCTCCTTCCGGCGCGCCCAAAGCTTGGTGGGAACAAAAATACCTACA
GCTGGTCGAAGGCACATCTTTCGACCCGGCGGAGGCGGGTAAACGTCGGT
CCATCTTCGGGTACTACCAACGGGAAGGAGAAGAAGCGCCGGACTTACCT
TTTTTGCCCTCCGGGGACCCCCCGGAAGACGCCGAGCTTCCCGTCTTCCG
CCGGGAGCAGTTTGTGAACACGACCTGGACGTTGGGGACCGTTTCGGACG
GTTGGAATCCGTTGAAACGCGTGCAACGGACCCGGGTATTCTTTCGGGAG
GACGGTCGCGTCATTTGGGTCAATGGGGGAAACAAGGGGGAGTGGACGTT
TGACGCGCGCAGCAACGTCTTTCGCTTCGGGCGGGAATCGTTTTTGAGTT
GGAACGGCCGCCGGAGTTACCCTACTCTACTGACGGAGGAGCGCTCTTTG
TACTACATGCAAGGTTTCGTGATTGGGTGGGCGCCTTTCACCCCTTTAAG
CGTCTTCGGTTTGTGGCAAATGTATCGGGACGACGTGAGTGAGGAGGAAA
GAGGGGTGGCACCCTGGGAGGAGGAGGAAGAGGGACGGGAGGGAGGGGAG
GGAGGGGAAGGGGGGAAGAAGAGTATGTTGCGCGGGTGA back to top
|