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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100368g1.3790.mrna |
| Orig protein id | gnl|cribi|Naga_100368g1.3790 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:118385..120098 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2328 ID=rna2328|Name=rna2328|organism=Nannochloropsis gaditana|type=mRNA|length=201bp
ATGCGCTTGAGCCTGACATCCACGTGCCACCGGCGTCCTTTCTCGCTTCC
CACTAGCCACCAGAAGTCGTCTTCAATTAACCGACTGATCCCCCGCTATA
TCCGGAGGCCACCGTCCAAGCCCTTTAGAAAGCTGGCAGCCTCCCTCTCC
TTCGTGCCACAGCAACTCTTCGTTGTTGCTGCCATCACGCACCCACCATA
G back to topprotein sequence of rna2328 >rna2328-protein ID=rna2328-protein|Name=rna2328|organism=Nannochloropsis gaditana|type=polypeptide|length=504bp
MAMWPSFLTNQGKTSRSVSPSISDDKGPLSLDITPDDFETDHVPRKHKVH
TMGPTSRNDSFMTYGLSAEDDSNLDILAAQLTLQAHEAKALAAASAAYLK
APRPLLSTPCRRGSWRETSLYSGDVKHAPKRSYFGKDLEQGGKKMGSLAA
HLGLWSKDGSGALEMNGKSPPHGLEMLSQVSGIQQTPIQTITYMKDGSKR
VDDLGLKDVLRYIQSAVRSVHAKEQEMFALQRGESLASSTSAYTPSITTS
PASSAPPALYFARGHDFPNGHEHAQLAPAPGKNAWGSGSSNSVPYTVPPP
YGEARARSAEELRFRSDPSHTMDTGGLHRTATGRARRSSQRLPPEGPFPR
CTPTSYTSCGSVGVGGGMGPGGMPGGGGGRGGRAGGNAERPGHPPVVYRL
GFGGGAEEGDVHRGAETHGDFEPGRAQMFGLLGPAHCLGPGGSGPRVPRA
PGGEFELAAAAEEGVRSGGRGREKGGRRGGGSNGGRGGGGGRGFRVRGAG
GRSL back to topmRNA from alignment at CM002459.1:118385..120098+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2328 ID=rna2328|Name=rna2328|organism=Nannochloropsis gaditana|type=mRNA|length=1714bp|location=Sequence derived from alignment at CM002459.1:118385..120098+ (Nannochloropsis gaditana)
GCAAGCCTTTTACTGCCGCCGCCGAAGCGGATACCTCGACGTTCCGTCTT
GGCACACATTAAGCaccatttcttccctccattaCGACAGGACAACATAG
AGCAACAACATcacctgcttttccttcctctgctggGGCGTCGACAGCat
tggaaggagaaagcacACAGCTTCAAGTTGTGTCGCCTACGCTGCCACGG
CTATGGCCATGTGGCCCTCCTTTCTAACCAACCAGGGCAAGACTTCCcgc
tccgtctccccctccatctcggACGACAAAGGCCCTCTGTCCTTAGACAT
TACACCGGACGACTTCGAGACCGACCACGTACCGAGGAAGCACAAAGTGC
ATACAATGGGACCGACTTCCCGCAACGATTCCTTCATGACCTACGGCCTA
TCCGCCGAAGACGACTCCAACCTCGACATCCTGGCTGCGCAATTGACTTT
ACAAGCCCACGAAGCCAAGGCTTTGGCCGCGGCGTCCGCCGCGTACCTCA
AGGCCCCACGTCCCTTGTTGAGCACCCCCTGTCGCAGGGGAAGCTGGCGC
GAGACGAGTTTGTATAGCGGGGATGTGAAACATGCCCCCAAGCGCAGTTA
TTTTGGAAAGGACTtggagcagggcgggaagaaaatgggCAGTCTGGCCG
CGCACCTGGGCCTGTGGAGCAAGGATGGGAGCGGTGCGCTCGAGATGAAC
GGGAAGAGTCCTCCCCACGGCCTGGAGATGTTGAGTCAAGTGAGTGGGAT
CCAACAGACACCGATCCAAACCATCACCTACATGAAGGACGGAAGCAAGC
GCGTGGACGACCTGGGCCTGAAAGACGTGCTTCGGTACATTCAAAGCGCA
GTGCGGAGCGTGCACGCCAAGGAACAGGAGATGTTTGCCCTGCAACGGGG
GGAGAGCCTGGCGTCTTCCACGTCTGCCTACACCCCCTCCATCACGAcct
cgcccgcttcctccgcccccccggccctttACTTTGCCCGTGGGCACGAC
TTTCCCAACGGTCACGAGCATGCCCagcttgctcctgctcctgggAAAAA
CGCTtgggggagtgggagcagcAACTCGGTTCCTTATACGGTTCCACCGC
CCTACGGAGAAGCTCGCGCGCGGAGTGCGGAAGAATTGCGATTCCGTTCC
GATCCTTCCCATACCATGGACACCGGAGGCTTGCACCGGACCGCcacggg
gcgggcgagacGCTCTTCGCAGCGGTTGCCGCCCGAGggtcccttccctc
gctgTACCCCGACCTCGTACACGTCCTGTGGGAGCGTgggcgtcgggggg
ggaatggggcctggagggatgcctgggggggggggcgggcggggggggag
ggccggggggaatGCTGAACGCCCGGGACATCCGCCGGTTGTGTACCGGC
TTGGATTCGGAGGCGGcgcggaagaaggagatgtcCATCGCGGTGCGGAA
ACACACGGTGATTTTGAACCTGGACGAGCTCAGATGTTTGGTCTTTTGGG
ACCGGCTCATTGTCTTGGTCCCGGAGGGAGCGGACCCCGAGTGCCACGGG
CGCCTGGAGGCGAATTTGAACTGGCTGCGGCTGCAGAAGAAGGCGTTCGc
agtgggggaagggggagggaaaaggggggaaggaggggcggagggagtaa
tggagggaggggcggaggaggaggaagagggtttCGAGTTCGTGGCGCTG
GAGGTAGGTCGTTG back to topCoding sequence (CDS) from alignment at CM002459.1:118385..120098+ >rna2328 ID=rna2328|Name=rna2328|organism=Nannochloropsis gaditana|type=CDS|length=1512bp|location=Sequence derived from alignment at CM002459.1:118385..120098+ (Nannochloropsis gaditana)
ATGGCCATGTGGCCCTCCTTTCTAACCAACCAGGGCAAGACTTCCcgctc
cgtctccccctccatctcggACGACAAAGGCCCTCTGTCCTTAGACATTA
CACCGGACGACTTCGAGACCGACCACGTACCGAGGAAGCACAAAGTGCAT
ACAATGGGACCGACTTCCCGCAACGATTCCTTCATGACCTACGGCCTATC
CGCCGAAGACGACTCCAACCTCGACATCCTGGCTGCGCAATTGACTTTAC
AAGCCCACGAAGCCAAGGCTTTGGCCGCGGCGTCCGCCGCGTACCTCAAG
GCCCCACGTCCCTTGTTGAGCACCCCCTGTCGCAGGGGAAGCTGGCGCGA
GACGAGTTTGTATAGCGGGGATGTGAAACATGCCCCCAAGCGCAGTTATT
TTGGAAAGGACTtggagcagggcgggaagaaaatgggCAGTCTGGCCGCG
CACCTGGGCCTGTGGAGCAAGGATGGGAGCGGTGCGCTCGAGATGAACGG
GAAGAGTCCTCCCCACGGCCTGGAGATGTTGAGTCAAGTGAGTGGGATCC
AACAGACACCGATCCAAACCATCACCTACATGAAGGACGGAAGCAAGCGC
GTGGACGACCTGGGCCTGAAAGACGTGCTTCGGTACATTCAAAGCGCAGT
GCGGAGCGTGCACGCCAAGGAACAGGAGATGTTTGCCCTGCAACGGGGGG
AGAGCCTGGCGTCTTCCACGTCTGCCTACACCCCCTCCATCACGAcctcg
cccgcttcctccgcccccccggccctttACTTTGCCCGTGGGCACGACTT
TCCCAACGGTCACGAGCATGCCCagcttgctcctgctcctgggAAAAACG
CTtgggggagtgggagcagcAACTCGGTTCCTTATACGGTTCCACCGCCC
TACGGAGAAGCTCGCGCGCGGAGTGCGGAAGAATTGCGATTCCGTTCCGA
TCCTTCCCATACCATGGACACCGGAGGCTTGCACCGGACCGCcacggggc
gggcgagacGCTCTTCGCAGCGGTTGCCGCCCGAGggtcccttccctcgc
tgTACCCCGACCTCGTACACGTCCTGTGGGAGCGTgggcgtcgggggggg
aatggggcctggagggatgcctgggggggggggcgggcggggggggaggg
ccggggggaatGCTGAACGCCCGGGACATCCGCCGGTTGTGTACCGGCTT
GGATTCGGAGGCGGcgcggaagaaggagatgtcCATCGCGGTGCGGAAAC
ACACGGTGATTTTGAACCTGGACGAGCTCAGATGTTTGGTCTTTTGGGAC
CGGCTCATTGTCTTGGTCCCGGAGGGAGCGGACCCCGAGTGCCACGGGCG
CCTGGAGGCGAATTTGAACTGGCTGCGGCTGCAGAAGAAGGCGTTCGcag
tgggggaagggggagggaaaaggggggaaggaggggcggagggagtaatg
gagggaggggcggaggaggaggaagagggtttCGAGTTCGTGGCGCTGGA
GGTAGGTCGTTG back to top
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