rna2327, rna2327 (mRNA) Nannochloropsis gaditana

Overview
Namerna2327
Unique Namerna2327
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length201
Alignment locationCM002459.1:117267..117543 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100368g2.3792.mrna
Orig protein idgnl|cribi|Naga_100368g2.3792
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:117267..117543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100368g2gene2222Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2327rna2327-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28355.1cds2319Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2327 ID=rna2327|Name=rna2327|organism=Nannochloropsis gaditana|type=mRNA|length=201bp
ATGCGCATTCTTGCCAGAGAGTCTCTTGGCCTTAACGACAAAATCAACCT
TTTCAACCATGCCTGCTTGCTGCTCCCGCGCGCGGCTTGCCTTTCTCGCA
GCCGTCATCACCTTGATGTGTCTTGTTCACAAGTCCGAGGCGGTAAACAC
GGGCACCCTCACTCGCGACACTCCCATCGATCCTGGGCCCACGAATGGTG
A
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protein sequence of rna2327

>rna2327-protein ID=rna2327-protein|Name=rna2327|organism=Nannochloropsis gaditana|type=polypeptide|length=66bp
MRLSLTSTCHRRPFSLPTSHQKSSSINRLIPRYIRRPPSKPFRKLAASLS
FVPQQLFVVAAITHPP
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mRNA from alignment at CM002459.1:117267..117543-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2327 ID=rna2327|Name=rna2327|organism=Nannochloropsis gaditana|type=mRNA|length=277bp|location=Sequence derived from alignment at CM002459.1:117267..117543- (Nannochloropsis gaditana)
ATGCGCTTGAGCCTGACATCCACGTGCCACCGGCGTCCTTTCTCGCTTCC
CACTAGCCACCAGAAGGTTTGCTATCCTGTATTCATTATATCTTTCCTCC
CCATGCACAGCTGCAACTAAGATCTCCACAAGAGAGGCTTAGTCGTCTTC
AATTAACCGACTGATCCCCCGCTATATCCGGAGGCCACCGTCCAAGCCCT
TTAGAAAGCTGGCAGCCTCCCTCTCCTTCGTGCCACAGCAACTCTTCGTT
GTTGCTGCCATCACGCACCCACCATAG
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Coding sequence (CDS) from alignment at CM002459.1:117267..117543-

>rna2327 ID=rna2327|Name=rna2327|organism=Nannochloropsis gaditana|type=CDS|length=402bp|location=Sequence derived from alignment at CM002459.1:117267..117543- (Nannochloropsis gaditana)
TCGTCTTCAATTAACCGACTGATCCCCCGCTATATCCGGAGGCCACCGTC
CAAGCCCTTTAGAAAGCTGGCAGCCTCCCTCTCCTTCGTGCCACAGCAAC
TCTTCGTTGTTGCTGCCATCACGCACCCACCATAGATGCGCTTGAGCCTG
ACATCCACGTGCCACCGGCGTCCTTTCTCGCTTCCCACTAGCCACCAGAA
GTCGTCTTCAATTAACCGACTGATCCCCCGCTATATCCGGAGGCCACCGT
CCAAGCCCTTTAGAAAGCTGGCAGCCTCCCTCTCCTTCGTGCCACAGCAA
CTCTTCGTTGTTGCTGCCATCACGCACCCACCATAGATGCGCTTGAGCCT
GACATCCACGTGCCACCGGCGTCCTTTCTCGCTTCCCACTAGCCACCAGA
AG
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Synonyms
Publications