EWM28355.1, cds2319 (CDS) Nannochloropsis gaditana

Overview
NameEWM28355.1
Unique Namecds2319
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:117478..117543 -
Alignment locationCM002459.1:117267..117401 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28355.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100368g2.3792.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:117478..117543 -
CM002459.1supercontigCM002459.1:117267..117401 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28355.1 vs. NCBI_GenBank
Match: gi|585110715|gb|EWM28355.1| (hypothetical protein Naga_100368g2 [Nannochloropsis gaditana])

HSP 1 Score: 129.413 bits (324), Expect = 5.405e-38
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MRLSLTSTCHRRPFSLPTSHQKSSSINRLIPRYIRRPPSKPFRKLAASLSFVPQQLFVVAAITHPP 66
            MRLSLTSTCHRRPFSLPTSHQKSSSINRLIPRYIRRPPSKPFRKLAASLSFVPQQLFVVAAITHPP
Sbjct:    1 MRLSLTSTCHRRPFSLPTSHQKSSSINRLIPRYIRRPPSKPFRKLAASLSFVPQQLFVVAAITHPP 66
The following BLAST results are available for this feature:
BLAST of EWM28355.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110715|gb|EWM28355.1|5.405e-38100.00hypothetical protein Naga_100368g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2327rna2327Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications