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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100368g5.3797.mrna |
| Orig protein id | gnl|cribi|Naga_100368g5.3797 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:112809..114582 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2324 ID=rna2324|Name=rna2324|organism=Nannochloropsis gaditana|type=mRNA|length=576bp
ATGTCCCCCTCCTTTCCACATGACCCGTTGCCTTTGGTGGTACACGGCTC
TCCCCCCCTGGTTCTGAGGAGAAGATCGCAACGAGCGGAGGTGAAAATTT
TAAGCTTTTGTTCGGAGGCAAGCAAAGCAGTCTACACGAGAGTACTCGAT
GATATGATGATGCAATTTTACGGGAGGAGCGCACCCTCGGAAGAGGGACA
ATTTCCGCAGGAAGTAGAAAGGACTATATGGAAGACAAAGAACAGGTCGA
GGCGCAAAGAGCATGATTGTACGGCACACCCCCACAGAAGGGGTATGCCG
GAGCCGCTGCCACGGTCGCAGGGTCAGGAATATGAGCAATTAACCTGTGT
GCTGACTCGATTGAGATCAGCAGTTGAAAGGGTAGGTGGGCAGACGACGC
CGCTCCTAATTCTTGGCGAGGGGAATATTTTCTTGCTCTTTTTACGGGCC
GCTGGCGTGCGTCGTCAGTGGTGCAGAAGGGAGGATGGAGTGTTTTCTTC
AAGGGAGAGGAGTCGGGGGGAAATCTTGAAGGCAAGAGGAATGACCGATG
AGGACCAGATATGTTCGGACGTGTGA back to topprotein sequence of rna2324 >rna2324-protein ID=rna2324-protein|Name=rna2324|organism=Nannochloropsis gaditana|type=polypeptide|length=418bp
MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATA
SKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKAL
TRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRY
VYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLR
LAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVG
QEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGR
KREEAWEEAARKRRKKEREEEGGSLERQRECVAAIVEALRKSWEGGTSVD
LKRRRQVHQGVGRGKKRRRCRVLSATAAEQGEGGTEEGFLRPPVFRAFFG
REVSRMFEFAMWRSLRRK back to topmRNA from alignment at CM002459.1:112809..114582- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2324 ID=rna2324|Name=rna2324|organism=Nannochloropsis gaditana|type=mRNA|length=1774bp|location=Sequence derived from alignment at CM002459.1:112809..114582- (Nannochloropsis gaditana)
ATGTTCTTGGCCCTAAAGCTCCTCGTTGTCCTGGGAATACTCTCCTATGG
CGTCGCCACGGTCCTGACCAGCGACCACTTGACCCTCGCAGGGTTTCAGG
CCCCTCTGAACCATTTTCTGCGAGGAGGACGCTTGTACCCCGCTACCGCC
TCCAAACCCTCGCCTTCCACCTCGGGCACGGACCCCCACCACCTCCCTCA
CCACCAGCCTCCAGATGGGGGCATGAACTTGCTCCGCAGGCCGTGGCCAT
GGCAGGTGGACTCTTCGGTCCACACCCCACCCGGGGCCCTCAAGGCGTTG
ACCCGACGTCGACAACAGCCCACGGGGGCAACGACAAGTTTTTTCGAGTA
CTGGGGTGATTCCAAACTGATCACCACCGTGGACGGCTTGAGGACACGGC
ACGGGTACGTGAAGGGACGAGGTTAGAAAGAGAGTTCGGGGAGGGACTTT
GGAAAAACAAGTGGATGAGATGATGGGATGCGCCCGTCGAGTTGTGGCGA
ATGGAAAGAATCCGACGTAGACATTCCGCACGGCCTGTGAAGATAGCACT
GTGGACGCCGCTGGTCGTCGTCTTTAGCTGAAAATTACCGAAATTTACCT
TCTGTCTCTCCTTTCCAGACAAGGCAGCTTTTGGGGTGACCTCAACCACG
TCGAGACGCGCTACGTCTACCACCAGCTCCTGCCCCGGCACTTGCTGCAG
GATGCGCAAGCTCACCCGGATGCCTTGGCCGTTGAAGACCTCGCACGTTT
GGCCTCCACTGCACGTCACGCGGCCCGCCTATACGCCCGGGAAAGAAGCT
CTTTGCCGCTCCGTCTGGCAGCAGGTAAGAGATTTTTTCTTTCCCTCCCT
CCCTTCCGTCCGTTCTTTTTTTCGCCTCGCGCCTCTTCTTCCCCATTCTC
TCCCGTCCCGTGCCCCGCGTCGGGCAGACGTACCCGGTCGCTCTGACCTC
TGACCCTCCCTCCTTCCCTTCCTCCCCCTGCCTCCCCTGCAGGGCTCTAC
GACGGTTTCCGGCACCTCTCCACCTTTGGTCGATGGTCCTGGACGGGCAT
GTCCTACGAAGAAGTCTGGTGCAAGTACGAATCGAAGATCCAGAAGGAGC
TGGCAGAGGAAGGGAGGGCGGGGCAAGTGGGTCAGGAGGAATTGAACCGG
ATGGTAGCTTTCCGAATACTGGAGAAGTCGTGCGAGACGAATTCTGGCTT
CGACCGCTTTGCGCAAGTGGAACGTGCCCACGACATCCTCTTGGCGGCGG
CGGCCCGGAAGGAAGGGAGGAAGGGGGGGAGGAAGAGGGAGGAGGCTTGG
GAAGAGGCAGCTAGGAAACGGCGGAAAAAGTTACTGGCTGACTTTGCGGC
CGGGCAGGTCCCGGCGTTGGATGGCGCCGAGGAGAAGGAGAAAGGGAAAG
GGAGGAGGAAGGAGGGTCTCTGGAAAGACAAAGGGAGTGCGTTGCTGCCA
TTGTTGAAGCACTTCGAAAATCTTGGGAGGGCGGTACCTCCGTTGACCTG
AAACGGCGCAGGCAGGTGCAGTAAAAAACTAGGGCGAGAGCGTGGAGGGT
ACAGAGCTCCATATACATAGGGTACTATAGATTGAAACAGTCAGGGCGTG
GGTCGAGGGAAGAAGCGAAGACGCTGTAGAGTTTTGTCAGCTACAGCTGC
CGAGCAAGGGGAAGGGGGGACGGAAGAGGGCTTTTTGAGACCACCAGTTT
TTCGCGCATTTTTTGGGAGGGAAGTGAGCAGGATGTTTGAATTTGCGATG
TGGCGTTCGTTGAGAAGAAAATAG back to topCoding sequence (CDS) from alignment at CM002459.1:112809..114582- >rna2324 ID=rna2324|Name=rna2324|organism=Nannochloropsis gaditana|type=CDS|length=6285bp|location=Sequence derived from alignment at CM002459.1:112809..114582- (Nannochloropsis gaditana)
TCAGGGCGTGGGTCGAGGGAAGAAGCGAAGACGCTGTAGAGTTTTGTCAG
CTACAGCTGCCGAGCAAGGGGAAGGGGGGACGGAAGAGGGCTTTTTGAGA
CCACCAGTTTTTCGCGCATTTTTTGGGAGGGAAGTGAGCAGGATGTTTGA
ATTTGCGATGTGGCGTTCGTTGAGAAGAAAATAGGGAAAGGGAGGAGGAA
GGAGGGTCTCTGGAAAGACAAAGGGAGTGCGTTGCTGCCATTGTTGAAGC
ACTTCGAAAATCTTGGGAGGGCGGTACCTCCGTTGACCTGAAACGGCGCA
GGCAGGTGCAGGCTCTACGACGGTTTCCGGCACCTCTCCACCTTTGGTCG
ATGGTCCTGGACGGGCATGTCCTACGAAGAAGTCTGGTGCAAGTACGAAT
CGAAGATCCAGAAGGAGCTGGCAGAGGAAGGGAGGGCGGGGCAAGTGGGT
CAGGAGGAATTGAACCGGATGGTAGCTTTCCGAATACTGGAGAAGTCGTG
CGAGACGAATTCTGGCTTCGACCGCTTTGCGCAAGTGGAACGTGCCCACG
ACATCCTCTTGGCGGCGGCGGCCCGGAAGGAAGGGAGGAAGGGGGGGAGG
AAGAGGGAGGAGGCTTGGGAAGAGGCAGCTAGGAAACGGCGGAAAAAACA
AGGCAGCTTTTGGGGTGACCTCAACCACGTCGAGACGCGCTACGTCTACC
ACCAGCTCCTGCCCCGGCACTTGCTGCAGGATGCGCAAGCTCACCCGGAT
GCCTTGGCCGTTGAAGACCTCGCACGTTTGGCCTCCACTGCACGTCACGC
GGCCCGCCTATACGCCCGGGAAAGAAGCTCTTTGCCGCTCCGTCTGGCAG
CAGATGTTCTTGGCCCTAAAGCTCCTCGTTGTCCTGGGAATACTCTCCTA
TGGCGTCGCCACGGTCCTGACCAGCGACCACTTGACCCTCGCAGGGTTTC
AGGCCCCTCTGAACCATTTTCTGCGAGGAGGACGCTTGTACCCCGCTACC
GCCTCCAAACCCTCGCCTTCCACCTCGGGCACGGACCCCCACCACCTCCC
TCACCACCAGCCTCCAGATGGGGGCATGAACTTGCTCCGCAGGCCGTGGC
CATGGCAGGTGGACTCTTCGGTCCACACCCCACCCGGGGCCCTCAAGGCG
TTGACCCGACGTCGACAACAGCCCACGGGGGCAACGACAAGTTTTTTCGA
GTACTGGGGTGATTCCAAACTGATCACCACCGTGGACGGCTTGAGGACAC
GGCACGGTCAGGGCGTGGGTCGAGGGAAGAAGCGAAGACGCTGTAGAGTT
TTGTCAGCTACAGCTGCCGAGCAAGGGGAAGGGGGGACGGAAGAGGGCTT
TTTGAGACCACCAGTTTTTCGCGCATTTTTTGGGAGGGAAGTGAGCAGGA
TGTTTGAATTTGCGATGTGGCGTTCGTTGAGAAGAAAATAGGGAAAGGGA
GGAGGAAGGAGGGTCTCTGGAAAGACAAAGGGAGTGCGTTGCTGCCATTG
TTGAAGCACTTCGAAAATCTTGGGAGGGCGGTACCTCCGTTGACCTGAAA
CGGCGCAGGCAGGTGCAGGCTCTACGACGGTTTCCGGCACCTCTCCACCT
TTGGTCGATGGTCCTGGACGGGCATGTCCTACGAAGAAGTCTGGTGCAAG
TACGAATCGAAGATCCAGAAGGAGCTGGCAGAGGAAGGGAGGGCGGGGCA
AGTGGGTCAGGAGGAATTGAACCGGATGGTAGCTTTCCGAATACTGGAGA
AGTCGTGCGAGACGAATTCTGGCTTCGACCGCTTTGCGCAAGTGGAACGT
GCCCACGACATCCTCTTGGCGGCGGCGGCCCGGAAGGAAGGGAGGAAGGG
GGGGAGGAAGAGGGAGGAGGCTTGGGAAGAGGCAGCTAGGAAACGGCGGA
AAAAACAAGGCAGCTTTTGGGGTGACCTCAACCACGTCGAGACGCGCTAC
GTCTACCACCAGCTCCTGCCCCGGCACTTGCTGCAGGATGCGCAAGCTCA
CCCGGATGCCTTGGCCGTTGAAGACCTCGCACGTTTGGCCTCCACTGCAC
GTCACGCGGCCCGCCTATACGCCCGGGAAAGAAGCTCTTTGCCGCTCCGT
CTGGCAGCAGATGTTCTTGGCCCTAAAGCTCCTCGTTGTCCTGGGAATAC
TCTCCTATGGCGTCGCCACGGTCCTGACCAGCGACCACTTGACCCTCGCA
GGGTTTCAGGCCCCTCTGAACCATTTTCTGCGAGGAGGACGCTTGTACCC
CGCTACCGCCTCCAAACCCTCGCCTTCCACCTCGGGCACGGACCCCCACC
ACCTCCCTCACCACCAGCCTCCAGATGGGGGCATGAACTTGCTCCGCAGG
CCGTGGCCATGGCAGGTGGACTCTTCGGTCCACACCCCACCCGGGGCCCT
CAAGGCGTTGACCCGACGTCGACAACAGCCCACGGGGGCAACGACAAGTT
TTTTCGAGTACTGGGGTGATTCCAAACTGATCACCACCGTGGACGGCTTG
AGGACACGGCACGGTCAGGGCGTGGGTCGAGGGAAGAAGCGAAGACGCTG
TAGAGTTTTGTCAGCTACAGCTGCCGAGCAAGGGGAAGGGGGGACGGAAG
AGGGCTTTTTGAGACCACCAGTTTTTCGCGCATTTTTTGGGAGGGAAGTG
AGCAGGATGTTTGAATTTGCGATGTGGCGTTCGTTGAGAAGAAAATAGGG
AAAGGGAGGAGGAAGGAGGGTCTCTGGAAAGACAAAGGGAGTGCGTTGCT
GCCATTGTTGAAGCACTTCGAAAATCTTGGGAGGGCGGTACCTCCGTTGA
CCTGAAACGGCGCAGGCAGGTGCAGGCTCTACGACGGTTTCCGGCACCTC
TCCACCTTTGGTCGATGGTCCTGGACGGGCATGTCCTACGAAGAAGTCTG
GTGCAAGTACGAATCGAAGATCCAGAAGGAGCTGGCAGAGGAAGGGAGGG
CGGGGCAAGTGGGTCAGGAGGAATTGAACCGGATGGTAGCTTTCCGAATA
CTGGAGAAGTCGTGCGAGACGAATTCTGGCTTCGACCGCTTTGCGCAAGT
GGAACGTGCCCACGACATCCTCTTGGCGGCGGCGGCCCGGAAGGAAGGGA
GGAAGGGGGGGAGGAAGAGGGAGGAGGCTTGGGAAGAGGCAGCTAGGAAA
CGGCGGAAAAAACAAGGCAGCTTTTGGGGTGACCTCAACCACGTCGAGAC
GCGCTACGTCTACCACCAGCTCCTGCCCCGGCACTTGCTGCAGGATGCGC
AAGCTCACCCGGATGCCTTGGCCGTTGAAGACCTCGCACGTTTGGCCTCC
ACTGCACGTCACGCGGCCCGCCTATACGCCCGGGAAAGAAGCTCTTTGCC
GCTCCGTCTGGCAGCAGATGTTCTTGGCCCTAAAGCTCCTCGTTGTCCTG
GGAATACTCTCCTATGGCGTCGCCACGGTCCTGACCAGCGACCACTTGAC
CCTCGCAGGGTTTCAGGCCCCTCTGAACCATTTTCTGCGAGGAGGACGCT
TGTACCCCGCTACCGCCTCCAAACCCTCGCCTTCCACCTCGGGCACGGAC
CCCCACCACCTCCCTCACCACCAGCCTCCAGATGGGGGCATGAACTTGCT
CCGCAGGCCGTGGCCATGGCAGGTGGACTCTTCGGTCCACACCCCACCCG
GGGCCCTCAAGGCGTTGACCCGACGTCGACAACAGCCCACGGGGGCAACG
ACAAGTTTTTTCGAGTACTGGGGTGATTCCAAACTGATCACCACCGTGGA
CGGCTTGAGGACACGGCACGGTCAGGGCGTGGGTCGAGGGAAGAAGCGAA
GACGCTGTAGAGTTTTGTCAGCTACAGCTGCCGAGCAAGGGGAAGGGGGG
ACGGAAGAGGGCTTTTTGAGACCACCAGTTTTTCGCGCATTTTTTGGGAG
GGAAGTGAGCAGGATGTTTGAATTTGCGATGTGGCGTTCGTTGAGAAGAA
AATAGGGAAAGGGAGGAGGAAGGAGGGTCTCTGGAAAGACAAAGGGAGTG
CGTTGCTGCCATTGTTGAAGCACTTCGAAAATCTTGGGAGGGCGGTACCT
CCGTTGACCTGAAACGGCGCAGGCAGGTGCAGGCTCTACGACGGTTTCCG
GCACCTCTCCACCTTTGGTCGATGGTCCTGGACGGGCATGTCCTACGAAG
AAGTCTGGTGCAAGTACGAATCGAAGATCCAGAAGGAGCTGGCAGAGGAA
GGGAGGGCGGGGCAAGTGGGTCAGGAGGAATTGAACCGGATGGTAGCTTT
CCGAATACTGGAGAAGTCGTGCGAGACGAATTCTGGCTTCGACCGCTTTG
CGCAAGTGGAACGTGCCCACGACATCCTCTTGGCGGCGGCGGCCCGGAAG
GAAGGGAGGAAGGGGGGGAGGAAGAGGGAGGAGGCTTGGGAAGAGGCAGC
TAGGAAACGGCGGAAAAAACAAGGCAGCTTTTGGGGTGACCTCAACCACG
TCGAGACGCGCTACGTCTACCACCAGCTCCTGCCCCGGCACTTGCTGCAG
GATGCGCAAGCTCACCCGGATGCCTTGGCCGTTGAAGACCTCGCACGTTT
GGCCTCCACTGCACGTCACGCGGCCCGCCTATACGCCCGGGAAAGAAGCT
CTTTGCCGCTCCGTCTGGCAGCAGATGTTCTTGGCCCTAAAGCTCCTCGT
TGTCCTGGGAATACTCTCCTATGGCGTCGCCACGGTCCTGACCAGCGACC
ACTTGACCCTCGCAGGGTTTCAGGCCCCTCTGAACCATTTTCTGCGAGGA
GGACGCTTGTACCCCGCTACCGCCTCCAAACCCTCGCCTTCCACCTCGGG
CACGGACCCCCACCACCTCCCTCACCACCAGCCTCCAGATGGGGGCATGA
ACTTGCTCCGCAGGCCGTGGCCATGGCAGGTGGACTCTTCGGTCCACACC
CCACCCGGGGCCCTCAAGGCGTTGACCCGACGTCGACAACAGCCCACGGG
GGCAACGACAAGTTTTTTCGAGTACTGGGGTGATTCCAAACTGATCACCA
CCGTGGACGGCTTGAGGACACGGCACGGTCAGGGCGTGGGTCGAGGGAAG
AAGCGAAGACGCTGTAGAGTTTTGTCAGCTACAGCTGCCGAGCAAGGGGA
AGGGGGGACGGAAGAGGGCTTTTTGAGACCACCAGTTTTTCGCGCATTTT
TTGGGAGGGAAGTGAGCAGGATGTTTGAATTTGCGATGTGGCGTTCGTTG
AGAAGAAAATAGGGAAAGGGAGGAGGAAGGAGGGTCTCTGGAAAGACAAA
GGGAGTGCGTTGCTGCCATTGTTGAAGCACTTCGAAAATCTTGGGAGGGC
GGTACCTCCGTTGACCTGAAACGGCGCAGGCAGGTGCAGGCTCTACGACG
GTTTCCGGCACCTCTCCACCTTTGGTCGATGGTCCTGGACGGGCATGTCC
TACGAAGAAGTCTGGTGCAAGTACGAATCGAAGATCCAGAAGGAGCTGGC
AGAGGAAGGGAGGGCGGGGCAAGTGGGTCAGGAGGAATTGAACCGGATGG
TAGCTTTCCGAATACTGGAGAAGTCGTGCGAGACGAATTCTGGCTTCGAC
CGCTTTGCGCAAGTGGAACGTGCCCACGACATCCTCTTGGCGGCGGCGGC
CCGGAAGGAAGGGAGGAAGGGGGGGAGGAAGAGGGAGGAGGCTTGGGAAG
AGGCAGCTAGGAAACGGCGGAAAAAACAAGGCAGCTTTTGGGGTGACCTC
AACCACGTCGAGACGCGCTACGTCTACCACCAGCTCCTGCCCCGGCACTT
GCTGCAGGATGCGCAAGCTCACCCGGATGCCTTGGCCGTTGAAGACCTCG
CACGTTTGGCCTCCACTGCACGTCACGCGGCCCGCCTATACGCCCGGGAA
AGAAGCTCTTTGCCGCTCCGTCTGGCAGCAGATGTTCTTGGCCCTAAAGC
TCCTCGTTGTCCTGGGAATACTCTCCTATGGCGTCGCCACGGTCCTGACC
AGCGACCACTTGACCCTCGCAGGGTTTCAGGCCCCTCTGAACCATTTTCT
GCGAGGAGGACGCTTGTACCCCGCTACCGCCTCCAAACCCTCGCCTTCCA
CCTCGGGCACGGACCCCCACCACCTCCCTCACCACCAGCCTCCAGATGGG
GGCATGAACTTGCTCCGCAGGCCGTGGCCATGGCAGGTGGACTCTTCGGT
CCACACCCCACCCGGGGCCCTCAAGGCGTTGACCCGACGTCGACAACAGC
CCACGGGGGCAACGACAAGTTTTTTCGAGTACTGGGGTGATTCCAAACTG
ATCACCACCGTGGACGGCTTGAGGACACGGCACGG back to top
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